Uses of Class mpicbg.models.IllDefinedDataPointsException (Fiji Javadocs 0-SNAPSHOT API)

Packages that use IllDefinedDataPointsException
Package	Description
<Unnamed>
bdv.viewer.animate
bunwarpj.trakem2.transform
lenscorrection
mpicbg.icp
mpicbg.ij
mpicbg.ij.plugin
mpicbg.models
mpicbg.pointdescriptor.model
mpicbg.spim.mpicbg
org.janelia.thickness.inference

Uses of IllDefinedDataPointsException in <Unnamed>

Methods in <Unnamed> that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`protected void`	Transform_MovingLeastSquaresMesh.`updateMapping()`
`protected void`	Transform_ThinPlateSpline.`updateMapping()`

Uses of IllDefinedDataPointsException in bdv.viewer.animate

Methods in bdv.viewer.animate that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<P extends PointMatch> void`	SimilarityModel3D.`fit(Collection<P> matches)`
`void`	SimilarityModel3D.`fit(double[][] p, double[][] q, double[] w)`
`void`	SimilarityModel3D.`fit(float[][] p, float[][] q, float[] w)`

Uses of IllDefinedDataPointsException in bunwarpj.trakem2.transform

Methods in bunwarpj.trakem2.transform that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<P extends PointMatch> void`	CubicBSplineTransform.`fit(Collection<P> matches)`

Uses of IllDefinedDataPointsException in lenscorrection

Methods in lenscorrection that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<P extends PointMatch> void`	PolynomialModel2D.`fit(Collection<P> pointMatches)`

Uses of IllDefinedDataPointsException in mpicbg.icp

Methods in mpicbg.icp that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`void`	ICP.`estimateIntialModel(List<PointMatch> matches, Model<?> model)` Estimates an initial `Model` based on some given `PointMatch`es.
`void`	ICP.`runICPIteration(Model<?> lastModel, Model<?> newModel)` Performs one iteration of the `ICP`.

Uses of IllDefinedDataPointsException in mpicbg.ij

Methods in mpicbg.ij that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`protected abstract void`	InteractiveMapping.`updateMapping()`

Uses of IllDefinedDataPointsException in mpicbg.ij.plugin

Methods in mpicbg.ij.plugin that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`static <M extends AbstractModel<M> & InverseCoordinateTransform> ij.ImagePlus`	AlignStacksWithLandmarks.`createAlignedStack(ij.ImagePlus source, ij.ImagePlus target, Collection<PointMatch> pointMatches, M model)`

Uses of IllDefinedDataPointsException in mpicbg.models

Methods in mpicbg.models that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<P extends PointMatch> void`	SimilarityModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	RigidModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	Model.`fit(Collection<P> matches)` Fit the `Model` to a set of data points minimizing the global transfer error.
`<P extends PointMatch> void`	InterpolatedModel.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	InterpolatedAffineModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	InterpolatedAffineModel2D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	InterpolatedAffineModel1D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	HomographyModel2D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	AffineModel3D.`fit(Collection<P> matches)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`<P extends PointMatch> void`	AffineModel2D.`fit(Collection<P> matches)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`<P extends PointMatch> void`	AffineModel1D.`fit(Collection<P> matches)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	SimilarityModel3D.`fit(double[][] p, double[][] q, double[] w)`
`void`	Model.`fit(double[][] p, double[][] q, double[] w)` Fit the `Model` to a set of data points minimizing the global transfer error.
`void`	AffineModel3D.`fit(double[][] p, double[][] q, double[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AffineModel2D.`fit(double[][] p, double[][] q, double[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AffineModel1D.`fit(double[][] p, double[][] q, double[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AbstractModel.`fit(double[][] p, double[][] q, double[] w)` Default fit implementation using `Model.fit(Collection)`.
`void`	SimilarityModel3D.`fit(float[][] p, float[][] q, float[] w)`
`void`	Model.`fit(float[][] p, float[][] q, float[] w)` Fit the `Model` to a set of data points minimizing the global transfer error.
`void`	AffineModel3D.`fit(float[][] p, float[][] q, float[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AffineModel2D.`fit(float[][] p, float[][] q, float[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AffineModel1D.`fit(float[][] p, float[][] q, float[] w)` Closed form weighted least squares solution as described by \citet{SchaeferAl06}.
`void`	AbstractModel.`fit(float[][] p, float[][] q, float[] w)` Default fit implementation using `Model.fit(Collection)`.
`void`	Tile.`fitModel()` Update the transformation `AbstractModel`.
`<P extends PointMatch> boolean`	Model.`localSmoothnessFilter(Collection<P> candidates, Collection<P> inliers, double sigma, double maxEpsilon, double maxTrust)` Filter a `Collection` of `PointMatches` by the smoothness of their support for the given `Model`.
`void`	TileConfiguration.`optimize(double maxAllowedError, int maxIterations, int maxPlateauwidth)` Minimize the displacement of all `Correspondence pairs` of all `Tiles` and tell about it.
`void`	ElasticMovingLeastSquaresMesh.`optimize(double maxError, int maxIterations, int maxPlateauwidth)` Minimize the displacement of all PointMatches of all tiles.
`void`	TileConfiguration.`optimize(double maxAllowedError, int maxIterations, int maxPlateauwidth, double damp)` Minimize the displacement of all `Correspondence pairs` of all `Tiles` and tell about it.
`void`	TileConfiguration.`optimize(ErrorStatistic observer, double maxAllowedError, int maxIterations, int maxPlateauwidth, double damp)` Minimize the displacement of all `Correspondence pairs` of all `Tiles` and tell about it.
`void`	TileConfiguration.`optimizeAndFilter(double maxAllowedError, int maxIterations, int maxPlateauwidth, double maxMeanFactor)`
`void`	TileConfiguration.`optimizeAndFilter(double maxAllowedError, int maxIterations, int maxPlateauwidth, double damp, double maxMeanFactor)`
`void`	ElasticMovingLeastSquaresMesh.`optimizeByStrength(double maxError, int maxIterations, int maxPlateauwidth, ij.process.ByteProcessor ipPlot, ij.ImagePlus impPlot)` Minimize the displacement of all PointMatches of all tiles.
`void`	ElasticMovingLeastSquaresMesh.`optimizeIteration()` Performs one optimization iteration.
`void`	ElasticMovingLeastSquaresMesh.`optimizeIteration(ErrorStatistic observer)` Performs one optimization iteration and writes its error into the ErrorStatistics
`void`	TileConfiguration.`optimizeSilently(ErrorStatistic observer, double maxAllowedError, int maxIterations, int maxPlateauwidth)` Minimize the displacement of all `Correspondence pairs` of all `Tiles`
`void`	TileConfiguration.`optimizeSilently(ErrorStatistic observer, double maxAllowedError, int maxIterations, int maxPlateauwidth, double damp)` Minimize the displacement of all `Correspondence pairs` of all `Tiles`
`void`	TileConfiguration.`optimizeSilentlyConcurrent(ErrorStatistic observer, double maxAllowedError, int maxIterations, int maxPlateauwidth, double damp)`
`List<Tile<?>>`	TileConfiguration.`preAlign()` Computes a pre-alignemnt of all non-fixed `Tile`s by propagating the pairwise models.
`void`	MovingLeastSquaresTransform2.`setMatches(Collection<PointMatch> matches)` Set the control points.
`void`	MovingLeastSquaresTransform.`setMatches(Collection<PointMatch> matches)`
`abstract void`	AbstractMovingLeastSquaresTransform.`setMatches(Collection<PointMatch> matches)`
`void`	MovingLeastSquaresTransform2.`setMatches(float[][] p, float[][] q, float[] w)` Set the control points passing them as arrays that are used by reference.
`void`	MovingLeastSquaresMesh.`updateModels()` Updates each vertex' transformation model by means of moving least squares.

Uses of IllDefinedDataPointsException in mpicbg.pointdescriptor.model

Methods in mpicbg.pointdescriptor.model that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<P extends PointMatch> void`	TranslationInvariantSimilarityModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	TranslationInvariantRigidModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	TranslationInvariantFixedModel.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	TranslationInvariantAffineModel3D.`fit(Collection<P> matches)`
`<P extends PointMatch> void`	FixedModel.`fit(Collection<P> matches)`

Uses of IllDefinedDataPointsException in mpicbg.spim.mpicbg

Methods in mpicbg.spim.mpicbg that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`void`	TileConfigurationSPIM.`optimize(double maxAllowedError, int maxIterations, int maxPlateauwidth, int debugLevel)` Minimize the displacement of all `Correspondence pairs` of all `Tiles`
`void`	TileConfigurationSPIM.`optimizeWithSketchTikZ(double maxAllowedError, int maxIterations, int maxPlateauwidth, int debugLevel)` Minimize the displacement of all `Correspondence pairs` of all `Tiles`
`void`	TileConfigurationSPIM.`optimizeWithSketchTikZNuclei(double maxAllowedError, int maxIterations, int maxPlateauwidth, int debugLevel)` Minimize the displacement of all `Correspondence pairs` of all `Tiles`
`List<Tile<?>>`	TileConfigurationSPIM.`preAlign()` Computes a pre-alignemnt of all non-fixed `Tile`s by propagating the pairwise models.

Uses of IllDefinedDataPointsException in org.janelia.thickness.inference

Methods in org.janelia.thickness.inference that throw IllDefinedDataPointsException
Modifier and Type	Method and Description
`<T extends RealType<T>,W extends RealType<W>> double[]`	InferFromMatrix.`getMediatedShifts(RandomAccessibleInterval<T> matrix, RandomAccessibleInterval<T> scaledMatrix, double[] lut, double[] scalingFactors, int iteration, RandomAccessibleInterval<double[]>[] correlationFitsStore, double[] shiftsArray, double[] weightSums, RandomAccessibleInterval<W> estimateWeightMatrix, double[] shiftWeights, Options options)`
`void`	InferFromMatrix.ModelRegularization.`regularize(double[] coordinates, Options options)`

Uses of Classmpicbg.models.IllDefinedDataPointsException

Uses of IllDefinedDataPointsException in <Unnamed>

Uses of IllDefinedDataPointsException in bdv.viewer.animate

Uses of IllDefinedDataPointsException in bunwarpj.trakem2.transform

Uses of IllDefinedDataPointsException in lenscorrection

Uses of IllDefinedDataPointsException in mpicbg.icp

Uses of IllDefinedDataPointsException in mpicbg.ij

Uses of IllDefinedDataPointsException in mpicbg.ij.plugin

Uses of IllDefinedDataPointsException in mpicbg.models

Uses of IllDefinedDataPointsException in mpicbg.pointdescriptor.model

Uses of IllDefinedDataPointsException in mpicbg.spim.mpicbg

Uses of IllDefinedDataPointsException in org.janelia.thickness.inference

Uses of Class
mpicbg.models.IllDefinedDataPointsException