SCIFIOToolCommand implementations that read
images.SCIFIOToolCommand superclass.TIFFTagSet object to the list of allowed
tag sets.TIFFTagSets of which this
directory is aware.APNGFormat.Metadata to
OMEMetadataAPNGFormat.Metadata to
OMEMetadata.decode method, in order to allow any necessary
tables or other structures to be initialized based on metadata
values.ImageReader in a SCIFIO Format, allowing proprietary
Bio-Formats readers to be used in SCIFIO-based applications.BioFormatsFormat.Metadata to
OMEMetadataBitsPerComponentBox from the provided
byte array containing the bit depths of each color component.BitsPerComponentBox based on the provide
org.w3c.dom.Node.BitsPerSample tag.BMPImageReader from the provided
ImageReaderSpi.ImageWriteParam for encoding images in
the BMP format.BMPImageWriteParam set to use a given
Locale and with default values for all parameters.BMPImageWriteParam object with default
values for all parameters and a null Locale.BMPImageWriter based on the provided
ImageWriterSpi.BMPFormat.Metadata to
OMEMetadataColorSpace to enable ColorModel
for image data which do not have an innate color representation.ColorSpace.Box instance using the provided
the box type and the box content in byte array format.Box instance using the provided
the box type, the box extra length, and the box content in byte
array format.Box instance from the provided
ImageInputStream at the specified position.ImageInputStream to be decompressed.true if PaletteBuilder is able to create
palette for given image type.true if PaletteBuilder is able to create
palette for given rendered image.ImageWriter can encode
the provided ImageTypeSpecifier or not.ImageWriter can encode
the provided ColorModel and SampleModel.ChannelDefinitionBox based on the provided
ColorModel.ChannelDefinitionBox based on the provided
content in byte array.ChannelDefinitionBox based on the provided
channel definitions.ChannelDefinitionBox based on the provided
org.w3c.dom.Node.checkReadParamBandSettings.FileChannel to null.FileChannel
to null.TIFFColorConverter object describing the color space of
the encoded pixel data, or null.ColorMap tag.ColorSpecificationBox from the provided data
elements.ColorSpecificationBox from the provided byte
array.ColorSpecificationBox based on the provided
org.w3c.dom.Node.TIFFField with another
TIFFField by comparing the tags.ComponentMappingBox from the provided
content byte array.ComponentMappingBox from the provided
component mapping.ComponentMappingBox based on the provided
org.w3c.dom.Node.newString to the end of oldString.newString to the end of oldString.Compression tag.computeRegions.computeRegions.SCIFIOToolCommand plugin for converting (reading and writing)
datasets.StringBox object with the provided type
based on the provided Node object based on reflection.ColorModel that may be used with the
specified SampleModel.TIFFDirectory instance from the contents of
an image metadata object.TIFFField from a TIFF native image
metadata node.ImageReader.img.src using IndexColorModel.BufferedImage whose underlying data
array will be suitable for holding the raw decoded output of
the decodeRaw method.DataEntryURLBox from its content data.DataEntryURLBox from its data elements.DataEntryURLBox from a Node.DataHandle to
RandomAccessInputStream.ImageInputStream stream, at offset
offset, and continuing for byteCount
bytes) into the output BufferedImage
image.byte
array b, starting at the offset given by
dstOffset.short
array s, starting at the offset given by
dstOffset.int
array i, starting at the offset given by
dstOffset.float
array f, starting at the offset given by
dstOffset.OMEMetadataService.OMEXMLService.DICOMFormat.Metadata to
OMEMetadatasourceXOffset and subsampleX, to map
between horizontal source and destination pixel coordinates.sourceYOffset and subsampleY, to map
between horizontal source and destination pixel coordinates.ImageOutputStream.EPSFormat.Metadata to
OMEMetadata.{'0', '2', '1',
'0'} to be used with the "EXIFVersion" tag to indicate
EXIF version 2.1.{'0', '2', '2',
'0'} to be used with the "EXIFVersion" tag to indicate
EXIF version 2.2.ExtraSamples tag.ImageInputStream using a
FileChannel as the eventual data source.FileChannelImageInputStream from a
FileChannel.ImageOutputStream using a
FileChannel as the eventual data destination.FileChannelImageOutputStream from a
FileChannel.FileTypeBox from the provided brand, minor
version and compatibility list.FileTypeBox from the provided byte array.FileTypeBox from
org.w3c.dom.Node.result array.abortRequested
to allow the abortions be monitored by J2KReadState.abortRequested
to allow the abortions be monitored by J2KRenderedImage.abortRequested
to allow the abortions be monitored by J2KReadState.alignROIList containing the allowed
TIFFTagSet objects.ApproximationAccuracy.bytes.TIFFTag.TIFF_SHORT data as an array of
chars (unsigned 16-bit integers).double.TIFFTag.TIFF_DOUBLE data as an array of
doubles (64-bit floating-point values).float.TIFFTag.TIFF_FLOAT data as an array of
floats (32-bit floating-point values).int.TIFFTag.TIFF_SLONG data as an array of
ints (signed 32-bit integers).long.TIFFTag.TIFF_LONG or
TIFF_IFD_POINTER data as an array of
longs (signed 64-bit integers).TIFFField as a node named either
"TIFFField" or "TIFFIFD" as described in the
TIFF native image metadata specification.TIFFTag.TIFF_RATIONAL data as an array of
2-element arrays of longs.TIFFTag.TIFF_SSHORT data as an array of
shorts (signed 16-bit integers).TIFFTag.TIFF_SRATIONAL data item as a
two-element array of ints.TIFFTag.TIFF_SRATIONAL data as an array of
2-element arrays of ints.TIFFTag.TIFF_ASCII value as a
String.Binning enumeration value for the
given String.type.bypassIIOMetadataNode.IIOMetadataNode.ImageReader, suitable for using for format checking
or suffix generation.causalCXInfocodeBlockSize.codeBlockSizecodeSegSymbolTIFFColorConverter object,
or null if none is set.TIFFColorConverter object that
will be used to perform color conversion when writing the
image, or null if none is set.componentTransformation.componentTransformationCorrection enumeration value for
the given String.decodingRate.decompositionLevelDetectorType enumeration value for
the given String.encodingRate.encodingRateEPH.EPHExperimentType enumeration value
for the given String.List<String>
Argument field which is multiValued = true and with an
index putting it at the end of the argument list.filters.filtersFlags data element.guardBitsimageIndexth image.imageIndexth image.Immersion enumeration value for
the given String.BaselineTIFFTagSet.EXIFGPSTagSet.EXIFInteroperabilityTagSet.EXIFParentTIFFTagSet.EXIFTIFFTagSet.FaxTIFFTagSet.GeoTIFFTagSet.IIOMetadataNode.IIOMetadataNode.IntellectualProperty flag.LaserMedium enumeration value for
the given String.LaserType enumeration value for
the given String.layerslossless.encodingRateIIOMetadata object.methodForMQLengthCalcmethodForMQTerminationminXminYtype.IIOMetadataNode from this
box.IIOMetadataNode from this channel definition
box.IIOMetadataNode from this color specification
box.IIOMetadataNode from this component mapping
box.IIOMetadataNode from this data entry URL
box.IIOMetadataNode from this file type box.IIOMetadataNode from this image header box.IIOMetadataNode from this palette box.IIOMetadataNode from this resolution
box.IIOMetadataNode from this signature
box.IIOMetadataNode from this UUID
box.IIOMetadataNode from this UUID list
box.IIOMetadataNode from this XML
box.IIOMetadataNode from this
box.noROIDescalingnumDecompositionLevels.ImageInputStream.TIFFFields in this directory.isBinary() returns
true), return the binary data as a packed byte array.packetPerTilePartpackPacketHeaderInMainpackPacketHeaderInTileTIFFTag of this directory if one
has been defined or null otherwise.parsingEnabledPhotometricinterpretation tag.Integer.MAX_VALUE.Precedence.precinctPartitionprogressionTypeprogressionType.progressionTypeStrings recognized as names by
this property source that begin with the supplied prefix.quantizationStepquantizationTyperaw parameter.ImageTypeSpecifier describing an image
whose underlying data array has the same format as the raw
source pixel data.ImageTypeSpecifier suitable for decoding an image
with the given parameters.resetMQresolution.ROIsTIFFIFD wherein all fields from the
BaselineTIFFTagSet are copied by value and all other
fields copied by reference.TIFFImageMetadata wherein all fields in the
root IFD from the BaselineTIFFTagSet are copied by value
and all other fields copied by reference.IIOMetadataNode.SOP.SOPstartLevelImageOutputStream that will be written.StreamSegment object indicating the
location of the initial portion of a desired segment in the
source stream.StreamSegment object
indicating the location of the initial portion of a desired
segment in the source stream.String value from an IIOMetadataNode.TIFFTag which has tag number equal to
tagNumber or null if no such tag
exists in the TIFFTagSets associated with this
directory.TIFFTag from this set that is
associated with the given tag number, or null if
no tag exists for that number.TIFFTag having the given tag name, or
null if the named tag does not belong to this tag set.[0, 65535].TIFFTagSet of which this tag is a part.TIFFTagSets of which this directory is aware.terminateOnByteTIFFCompressor that is currently set
to be used by the ImageWriter to encode each image
strip or tile, or null if none has been set.TIFFDecompressor that is currently set
to be used by the ImageReader to decode each image
strip or tile, or null if none has been set.UnknowColorspace flag.URL data element.String containing a human-readable
version of the data item.null if
no name is present.Version data element.writeCodeStreamOnly.ImageWriter.
{'2', '2', '0',
'0'} to be used with the "GPSVersionID" tag to indicate
GPS version 2.2.true if there are mnemonic names associated with
the set of legal values for the data associated with this tag.ICSFormat.Metadata to
OMEMetadata.ICSFormat.Metadata to
OMEMetadata.ImageInputStream into a
RandomAccessIO.RandomAccessIO instance from the supplied
ImageInputStream.ImageInputStream into
a InputStream.ImageInputStreamWrapper from the provided
ImageInputStream.BioFormatsFormat to OME-XML.ImageInputStream and ImageOutputStream
classes for use with the Java Image I/O Framework.true if the given data type
may be used for the data associated with this tag.true if this tag is used to point to an IFD
structure containing additional tags.true if the given ColorSpace object
is an instance of ICC_ColorSpace but is not one of the
standard ColorSpaces returned by
ColorSpace.getInstance().topDown parameter.Iterator over the TIFF fields.J2KImageReader from the provided
ImageReaderSpi.ImageReadParam for reading images in
the JPEG 2000 format.J2KImageReadParam.ImageReadParam for reading images in
the JPEG 2000 format.J2KImageReadParamJava.ImageWriteParam for writing images in
the JPEG 2000 format.Locale.J2KImageWriteParam object with default
values for all parameters.ImageWriteParam for writing images in
the JPEG 2000 format.J2KImageWriteParamJava object with default
values for all parameters.J2KImageWriteParamJava object with default
values for all parameters.J2KImageWriteParamJava object with default
values for all parameters.J2KImageWriter based on the provided
ImageWriterSpi.J2KMetadata object appropriate
for the given write parameters.J2KMetadata object appropriate
for the given image type and write parameters.J2KMetadata object appropriate
for the given image type and write parameters.J2KReadState.J2KReadState.JPEGTables.FileChannel.FileChannel.OptionHandler implementation for setting long array fields.IIOMetadata object containing metadata for the
current image.IIOMetadata object containing metadata for the
current image.OMEMetadata to
MicromanagerFormat.Metadata.maxOffset or offset of first pixel
different from pixel at bitOffset.NRRDFormat.Metadata to
OMEMetadataOBFFormat.Metadata to
OMEMetadataImageInputStream of the
start of the data to be decompressed.MetadataStore and MetadataRetrieve.Translator implementations that
operate on OMEMetadata.OMEXMLService.SCIFIOToolCommand plugin for printing OME-XML.PlatteBox from an
IndexColorModel.PlatteBox from an
org.w3c.dom.Node.PlatteBox from the provided length, bit
depths of the color components and the LUT.PlatteBox from the provided byte array.PhotometricInterpretation tag.true if the image is encoded using separate planes.PNMImageReader from the provided
ImageReaderSpi.ImageWriteParam for writing images in
the PNM format.PNMImageWriteParam object with default values
for parameters.PNMImageWriter based on the provided
ImageWriterSpi.MetadataStore, for the specified imageIndex,
using the provided values.MetadataStore, for the specified imageIndex,
using the values from the provided Metadata.MetadataStore, for the specified imageIndex,
using the values from the provided ImageMetadata.MetadataStore, for the specified imageIndex,
using the provided values.ImageMetadata.processImageProgress
So it can be access from the classes which are not in
ImageReader hierarchy.processImageProgress
So it can be access from the classes which are not in
ImageWriter hierachy.processImageProgress
So it can be access from the classes which are not in
ImageReader hierachy.processImageUpdate
So it can be access from the classes which are not in
ImageReader hierarchy.processImageUpdate
So it can be access from the classes which are not in
ImageReader hierachy.BufferedImage for the decodeRaw
method to write into.ImageInputStream
containing several raw images with the same image type: the number of
the images, the image type, the offset for the first sample of each image,
and the image size information.RawImageReader from the provided
ImageReaderSpi.ImageWriteParam for writing images in
the RAW format.RawImageWriter based on the provided
ImageWriterSpi.len bytes of data from the input stream into
an array of bytes.ImageInputStream
- read() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- read() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.ImageInputStreamWrapper
-
- read(byte[]) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.ImageInputStreamWrapper
-
- read(byte[], int, int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.ImageInputStreamWrapper
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.pcx.PCXImageReader
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageReader
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageReader
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- read(Rectangle) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFRenderedImage
-
- read(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
- readAsRaster() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KReadState
-
- readAsRaster(WritableRaster) - Method in class io.scif.media.imageioimpl.plugins.raw.RawRenderedImage
-
- readAsRenderedImage(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
- readAsRenderedImage(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageReader
-
- readAsRenderedImage(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- readBit() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readBits(int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readBitsPerComponentBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
Read the bits per component.
- readBlockHeader(DataHandle<Location>) - Method in class io.scif.lifesci.SDTInfo
-
Convenience method for reading from a block header section of an SDT header
stream.
- readBoolean() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readBoolean() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readBufferedImage() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KReadState
-
- readByte() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readByte() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read a signed byte (i.e., 8 bit) from the input.
- readByte() - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Reads a signed byte (i.e., 8 bit) from the input.
- readByte() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads a signed byte (8 bit) from the input.
- readByte() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readByte() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readBytes(IIOByteBuffer, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readChannelDefinitionBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the Channel Definition box
- readChar() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readChar() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readChecked() - Method in class io.scif.jj2000.j2k.entropy.decoder.ByteInputBuffer
-
Reads the next byte of data from this input stream.
- readColourSpecificationBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
Read the color specifications.
- readComponentMappingBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
Read the component mapping channel.
- readContiguousCodeStreamBox(int, long) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method skips the Contiguous codestream box and adds position
of contiguous codestream to a vector
- readCString() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readDouble() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readDouble() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads an IEEE double precision (i.e., 64 bit) floating-point number
from the input.
- readDouble() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read an IEEE double precision (i.e., 64 bit)
floating-point number from the input.
- readDouble() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads an IEEE double precision (i.e., 64 bit) floating-point number
from the input.
- readDouble() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readDouble() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readEPHMarker(PktHeaderBitReader) - Method in class io.scif.jj2000.j2k.codestream.reader.PktDecoder
-
Try to read an EPH marker.
- Reader() - Constructor for class io.scif.bf.BioFormatsFormat.Reader
-
- Reader() - Constructor for class io.scif.lifesci.SDTFormat.Reader
-
- reader - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The
ImageReader calling this
TIFFDecompressor.
- readFileFormat() - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method checks whether the given RandomAccessIO is a valid JP2 file
and if so finds the first codestream in the file.
- readFileTypeBox(int, long) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the File Type box
- readFloat() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readFloat() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads an IEEE single precision (i.e., 32 bit) floating-point number
from the input.
- readFloat() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read an IEEE single precision (i.e., 32 bit)
floating-point number from the input.
- readFloat() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads an IEEE single precision (i.e., 32 bit) floating-point number
from the input.
- readFloat() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFloat() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readFoundTilePartMarkSeg(int, int) - Method in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Return the DecoderSpecs instance filled when reading the headers
- readFully(byte[]) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readFully(byte[], int, int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readFully(byte[], int, int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Reads up to len bytes of data from this file into an array of
bytes.
- readFully(byte[], int, int) - Method in interface io.scif.jj2000.j2k.io.RandomAccessIO
-
Reads up to len bytes of data from this file into an array of
bytes.
- readFully(byte[], int, int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads 'len' bytes of data from this file into an array of bytes.
- readFully(char[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(short[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(int[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(long[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(float[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(double[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- readFully(char[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(short[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(int[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(long[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(float[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(double[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- readFully(byte[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(byte[]) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(short[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(char[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(int[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(long[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(float[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(double[], int, int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readFully(byte[], int, int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readHeader() - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageReader
-
- readHeader() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
- readHeader() - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageReader
-
- readHeader() - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
- readImageHeaderBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the Image Header box
- readInt() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readInt() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads a signed int (i.e., 32 bit) from the input.
- readInt() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read a signed int (i.e., 32 bit) from the input.
- readInt() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads a signed int (32 bit) from the input.
- readInt() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readInt() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readIntPropertyBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the contents of the Intellectual property box
- readJP2HeaderBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the JP2Header box
- readLine() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readLine() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readLong() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readLong() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads a signed long (i.e., 64 bit) from the input.
- readLong() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read a signed long (i.e., 64 bit) from the input.
- readLong() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads a signed long (64 bit) from the input.
- readLong() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readLong() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readMultiByteInteger(ImageInputStream) - Static method in class io.scif.media.imageioimpl.common.ImageUtil
-
- readNewBuffer(int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Reads a new buffer from the file.
- readPaletteBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the content of the palette box
- readPktBody(int, int, int, int, CBlkInfo[][][], int[]) - Method in class io.scif.jj2000.j2k.codestream.reader.PktDecoder
-
Reads specificied packet body in order to find offset of each
code-block's piece of codeword.
- readPktHead(int, int, int, int, CBlkInfo[][][], int[]) - Method in class io.scif.jj2000.j2k.codestream.reader.PktDecoder
-
Read specified packet head and found length of each code-block's piece
of codewords as well as number of skipped most significant bit-planes.
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageReader
-
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageReader
-
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageReader
-
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- readRaster(int, ImageReadParam) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
- readResolutionBox(int, int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
Read the resolution.
- readShort() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readShort() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads a signed short (i.e., 16 bit) from the input.
- readShort() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read a signed short (i.e., 16 bit) from the input.
- readShort() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads a signed short (16 bit) from the input.
- readShort() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readShort() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readSOPMarker(int[], int, int, int) - Method in class io.scif.jj2000.j2k.codestream.reader.PktDecoder
-
Try to read a SOP marker and check that its sequence number if not out
of sequence.
- readString(String) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readString(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readSupportsThumbnails() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- readTile(int, int, int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- readUnsignedByte() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readUnsignedByte() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read an unsigned byte (i.e., 8 bit) from the input.
- readUnsignedByte() - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Reads an unsigned byte (i.e., 8 bit) from the input.
- readUnsignedByte() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads an unsigned byte (8 bit) from the input.
- readUnsignedByte() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readUnsignedByte() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readUnsignedInt() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads an unsigned int (i.e., 32 bit) from the input.
- readUnsignedInt() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read an unsigned int (i.e., 32 bit) from the input.
- readUnsignedInt() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads a unsigned int (32 bit) from the input.
- readUnsignedInt() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readUnsignedInt() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readUnsignedShort() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readUnsignedShort() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Reads an unsigned short (i.e., 16 bit) from the input.
- readUnsignedShort() - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Should read an unsigned short (i.e., 16 bit) from the input.
- readUnsignedShort() - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Reads an unsigned short (16 bit) from the input.
- readUnsignedShort() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readUnsignedShort() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- readURLBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the contents of the XML box
- readUTF() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- readUTF() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- readUUIDBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the contents of the Intellectual property box
- readUUIDListBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the contents of the UUID List box
- readXMLBox(int) - Method in class io.scif.jj2000.j2k.fileformat.reader.FileFormatReader
-
This method reads the contents of the XML box
- rect - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
Flag indicating whether the ROI is rectangular or not
- RectROIMaskGenerator - Class in io.scif.jj2000.j2k.roi.encoder
-
This class generates the ROI masks when there are only rectangular ROIs in
the image.
- RectROIMaskGenerator(ROI[], int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.RectROIMaskGenerator
-
The constructor of the mask generator.
- red - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder.ColorNode
-
- red - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- redMask - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- reduceList - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- reduceTree() - Method in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- redX - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- redY - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- redZ - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- registerMsgLogger(Thread, MsgLogger) - Static method in class io.scif.jj2000.j2k.util.FacilityManager
-
Registers the MsgLogger 'ml' as the logging facility of the
thread 't'.
- registerProgressWatch(Thread, ProgressWatch) - Static method in class io.scif.jj2000.j2k.util.FacilityManager
-
- removeAllowedTagSet(TIFFTagSet) - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageReadParam
-
Removes a
TIFFTagSet object from the list of
allowed tag sets.
- removeBinData(OMEXMLMetadata) - Method in class io.scif.ome.services.DefaultOMEXMLService
-
- removeBinData(OMEXMLMetadata) - Method in interface io.scif.ome.services.OMEXMLService
-
- removeChannels(OMEXMLMetadata, int, int) - Method in class io.scif.ome.services.DefaultOMEXMLService
-
- removeChannels(OMEXMLMetadata, int, int) - Method in interface io.scif.ome.services.OMEXMLService
-
- removeChild(Node) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFFieldNode
-
- removeTagSet(TIFFTagSet) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDirectory
-
Removes an element from the group of
TIFFTagSets of which this
directory is aware.
- removeTIFFField(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDirectory
-
Removes a TIFF field from the directory.
- removeTIFFField(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageMetadata
-
- removeTIFFFields() - Method in class io.scif.media.imageio.plugins.tiff.TIFFDirectory
-
Removes all TIFF fields from the directory.
- RenderedImageSrc - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
- RenderedImageSrc(Raster, J2KImageWriteParamJava, J2KImageWriter) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.RenderedImageSrc
-
Creates
RenderedImageSrc for encoding a Raster.
- RenderedImageSrc(RenderedImage, J2KImageWriteParamJava, J2KImageWriter) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.RenderedImageSrc
-
Creates
RenderedImageSrc for encoding a
RenderedImage.
- replaceChild(Node, Node) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFFieldNode
-
- replacePixels(RenderedImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- replacePixels(Raster, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- repoc - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.POC
-
- repT - Variable in class io.scif.lifesci.SDTInfo
-
- requiredSize - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- RES_LY_COMP_POS_PROG - Static variable in interface io.scif.jj2000.j2k.codestream.ProgressionType
-
The bit stream is Resolution/Layer/Component/Position progressive : 1
- RES_POS_COMP_LY_PROG - Static variable in interface io.scif.jj2000.j2k.codestream.ProgressionType
-
The bit stream is Resolution/Position/Component/Layer progressive : 2
- reserved1 - Variable in class io.scif.lifesci.SDTInfo
-
- reserved2 - Variable in class io.scif.lifesci.SDTInfo
-
- reset() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- reset() - Method in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
Resets the buffer.
- reset() - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Resets the contents of this HeaderEncoder to its initial state.
- reset() - Method in class io.scif.jj2000.j2k.codestream.writer.PktEncoder
-
Resets the state of the object to the initial state, as if the object
was just created.
- reset() - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Resets the tree values and state.
- reset(int[]) - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Resets the tree values and state.
- reset() - Method in class io.scif.jj2000.j2k.entropy.encoder.ByteOutputBuffer
-
Discards all the buffered data, by resetting the counter of written
bytes to 0.
- reset() - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
Reinitializes the MQ coder and the underlying 'ByteOutputBuffer' buffer
as if a new object was instantaited.
- reset() - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.clib.InputStreamAdapter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.gif.GIFStreamMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.ImageInputStreamWrapper
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.pcx.PCXMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFStreamMetadata
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageWriter
-
- reset() - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPMetadata
-
- resetCtxt(int) - Method in class io.scif.jj2000.j2k.entropy.decoder.MQDecoder
-
Resets a context to the original probability distribution.
- resetCtxt(int) - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
Resets a context to the original probability distribution, and sets its
more probable symbol to 0.
- resetCtxts() - Method in class io.scif.jj2000.j2k.entropy.decoder.MQDecoder
-
Resets a context to the original probability distribution.
- resetCtxts() - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
Resets all contexts to their original probability distribution and sets
all more probable symbols to 0.
- resetHeaderMarkers() - Method in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Method that resets members indicating which markers have already been
found
- resetLocal() - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- resLvl - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The resolution level to which this subband contributes.
- reslvl - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.InvWTAdapter
-
The resquested image resolution level for reconstruction.
- RESOLUTION_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
- RESOLUTION_UNIT_CENTIMETER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "ResolutionUnit" tag.
- RESOLUTION_UNIT_INCH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "ResolutionUnit" tag.
- RESOLUTION_UNIT_NONE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "ResolutionUnit" tag.
- ResolutionBox - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
This class is defined to represent a Resolution Box of JPEG JP2
file format.
- ResolutionBox(int, byte[]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.ResolutionBox
-
Constructs a
ResolutionBox from the provided type and
content data array.
- ResolutionBox(int, float, float) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.ResolutionBox
-
Constructs a
ResolutionBox from the provided type and
horizontal/vertical resolutions.
- ResolutionBox(Node) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.ResolutionBox
-
Constructs a
ResolutionBox based on the provided
org.w3c.dom.Node.
- ResolutionLevel - Class in io.scif.formats.imaris
-
- ResolutionLevel(int, int, int, int, int, int, int, int, int) - Constructor for class io.scif.formats.imaris.ResolutionLevel
-
- ResolutionLevelMaker - Class in io.scif.formats.imaris
-
- ResolutionLevelMaker() - Constructor for class io.scif.formats.imaris.ResolutionLevelMaker
-
- resourceBaseName - Variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFMetadataFormat
-
- restart(int, int[], int, CBlkInfo[][][][][], boolean, ByteArrayInputStream) - Method in class io.scif.jj2000.j2k.codestream.reader.PktDecoder
-
Re-initialize the PktDecoder instance at the beginning of a new tile.
- restore() - Method in class io.scif.jj2000.j2k.codestream.writer.PktEncoder
-
Restores the last saved state of this object.
- restore() - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Restores the saved values and state of the tree.
- revision - Variable in class io.scif.lifesci.SDTInfo
-
Software revision number (lower 4 bits >= 10(decimal)).
- rgh - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct height reported in the reference grid
- rgn - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Reference to the RGN marker segments found in main and first tile-part
header.
- RGN() - Constructor for class io.scif.jj2000.j2k.codestream.HeaderInfo.RGN
-
- RGN - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Region-of-interest (RGN): 0xFF5E
- rgulx - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct horizontal upper-left coordinate in the reference grid
- rguly - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct vertical upper-left coordinate in the reference grid
- rgw - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct width reported in the reference grid
- ROI - Class in io.scif.jj2000.j2k.roi.encoder
-
This class contains the shape of a single ROI.
- ROI(int, ImgReaderPGM) - Constructor for class io.scif.jj2000.j2k.roi.encoder.ROI
-
Constructor for ROI with arbitrary shape
- ROI(int, int, int, int, int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.ROI
-
Constructor for rectangular ROIs
- ROI(int, int, int, int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.ROI
-
Constructor for circular ROIs
- ROIDeScaler - Class in io.scif.jj2000.j2k.roi
-
This class takes care of the de-scaling of ROI coefficients.
- ROIDeScaler(CBlkQuantDataSrcDec, MaxShiftSpec) - Constructor for class io.scif.jj2000.j2k.roi.ROIDeScaler
-
Constructor of the ROI descaler, takes EntropyDEcoder as source of data
to de-scale.
- roiInTile - Variable in class io.scif.jj2000.j2k.roi.encoder.ROIMaskGenerator
-
- ROIMaskGenerator - Class in io.scif.jj2000.j2k.roi.encoder
-
This class generates the ROI masks for the ROIScaler.It gives the scaler
the ROI mask for the current code-block.
- ROIMaskGenerator(ROI[], int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.ROIMaskGenerator
-
The constructor of the mask generator
- rois - Variable in class io.scif.jj2000.j2k.decoder.DecoderSpecs
-
ROI maxshift value specifications
- rois - Variable in class io.scif.jj2000.j2k.roi.encoder.ROIMaskGenerator
-
Array containing the ROIs
- roiSc - Variable in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Reference to the ROI module
- ROIScaler - Class in io.scif.jj2000.j2k.roi.encoder
-
This class deals with the ROI functionality.
- ROIScaler(Quantizer, ROIMaskGenerator, boolean, int, boolean, J2KImageWriteParamJava) - Constructor for class io.scif.jj2000.j2k.roi.encoder.ROIScaler
-
Constructor of the ROI scaler, takes a Quantizer as source of data to
scale.
- root - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- root - Variable in class io.scif.ome.OMEMetadata
-
OME core
- rootName - Variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFMetadataFormat
-
- rotate90(Point) - Method in class io.scif.jj2000.j2k.ModuleSpec
-
Rotate the ModuleSpec instance by 90 degrees (this modifies only tile
and tile-component specifications).
- rs - Variable in class io.scif.jj2000.j2k.entropy.Progression
-
Resolution index for the start of a progression
- rsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- RSIZ_BASELINE - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
No special capabilities (baseline) in codestream, in Rsiz field of SIZ
marker: 0x00.
- RSIZ_ER_FLAG - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Error resilience marker flag bit in Rsiz field in SIZ marker: 0x01
- RSIZ_ROI - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
ROI present marker flag bit in Rsiz field in SIZ marker: 0x02
- rspoc - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.POC
-
- rts - Variable in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
Regular termination specifications
- run() - Method in class io.scif.cli.AbstractSCIFIOToolCommand
-
Performs the actual tool operations.
- run() - Method in class io.scif.cli.convert.Convert
-
- run() - Method in class io.scif.cli.help.Help
-
- run() - Method in class io.scif.cli.info.Info
-
- run(String...) - Static method in class io.scif.cli.SCIFIOTools
-
Entry point for running SCIFIO commands.
- run() - Method in class io.scif.cli.show.Show
-
- run() - Method in class io.scif.ome.commands.OMEXMLToolCommand
-
- runAndWrite() - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Runs the rate allocation algorithm and writes the data to the bit
stream writer object provided to the constructor.
- runAndWrite() - Method in class io.scif.jj2000.j2k.entropy.encoder.PostCompRateAllocator
-
Runs the rate allocation algorithm and writes the data to the
bit stream.
- runCommand(String...) - Method in class io.scif.cli.AbstractSCIFIOToolCommand
-
- runCommand(String...) - Method in interface io.scif.cli.SCIFIOToolCommand
-
Executes this command with the given arguments.
- runTarget(Runnable, Object) - Method in class io.scif.jj2000.j2k.util.ThreadPool
-
Runs the run method of the specified target in an idle thread of this
pool.
- runTarget(Runnable, Object, boolean) - Method in class io.scif.jj2000.j2k.util.ThreadPool
-
Runs the run method of the specified target in an idle thread of this
pool.
- runTarget(Runnable, Object, boolean, boolean) - Method in class io.scif.jj2000.j2k.util.ThreadPool
-
Runs the run method of the specified target in an idle thread of this
pool.
S
- SAMPLE_FORMAT_FLOATING_POINT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SampleFormat" tag.
- SAMPLE_FORMAT_SIGNED_INTEGER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SampleFormat" tag.
- SAMPLE_FORMAT_UNDEFINED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SampleFormat" tag.
- SAMPLE_FORMAT_UNSIGNED_INTEGER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SampleFormat" tag.
- sampleFormat - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The value of the
SampleFormat tag.
- sampleModel - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The image's SampleModel.
- samplesPerPixel - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The value of the
SamplesPerPixel tag.
- SATURATION_HIGH - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Saturation" tag.
- SATURATION_LOW - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Saturation" tag.
- SATURATION_NORMAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Saturation" tag.
- save() - Method in class io.scif.jj2000.j2k.codestream.writer.PktEncoder
-
Saves the current state of this object.
- save() - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Saves the current values and state of the tree.
- saved - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The saved state.
- savePlane(int, long, Plane) - Method in class io.scif.formats.ImarisFormat.Writer
-
- sb - Variable in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
The subband to which the code-block belongs
- sb - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The subband in which this code-block is found
- sbandIdx - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The subband index within its resolution level.
- scanRX - Variable in class io.scif.lifesci.SDTInfo
-
- scanRY - Variable in class io.scif.lifesci.SDTInfo
-
- scanw - Variable in class io.scif.jj2000.j2k.image.DataBlk
-
The width of the scanlines used to store the data in the array
- scanw - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The width of the scanlines used to store the data in the array
- scanX - Variable in class io.scif.lifesci.SDTInfo
-
- scanY - Variable in class io.scif.lifesci.SDTInfo
-
- SCENE_CAPTURE_TYPE_LANDSCAPE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SceneCaptureType" tag.
- SCENE_CAPTURE_TYPE_NIGHT_SCENE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SceneCaptureType" tag.
- SCENE_CAPTURE_TYPE_PORTRAIT - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SceneCaptureType" tag.
- SCENE_CAPTURE_TYPE_STANDARD - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SceneCaptureType" tag.
- SCENE_TYPE_DSC - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SceneType" tag.
- SCIFIOToolCommand - Interface in io.scif.cli
-
Base interface for all SCIFIOTools commands.
- SCIFIOTools - Class in io.scif.cli
-
Entry point for all SCIFIO commands.
- scoc - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- scod - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- SCOX_HOR_CB_PART - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Horizontal code-block partition origin is at x=1
- SCOX_PRECINCT_PARTITION - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Precinct used flag
- SCOX_USE_EPH - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Use end of packet header marker
- SCOX_USE_SOP - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Use start of packet marker
- SCOX_VER_CB_PART - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Vertical code-block partition origin is at y=1
- SDTFormat - Class in io.scif.lifesci
-
SDTReader is the file format reader for Becker & Hickl SPC-Image SDT
files.
- SDTFormat() - Constructor for class io.scif.lifesci.SDTFormat
-
- SDTFormat.Metadata - Class in io.scif.lifesci
-
- SDTFormat.Parser - Class in io.scif.lifesci
-
- SDTFormat.Reader - Class in io.scif.lifesci
-
- SDTInfo - Class in io.scif.lifesci
-
SDTInfo encapsulates the header information for Becker & Hickl SPC-Image
SDT files.
- SDTInfo(DataHandle<Location>, MetaTable) - Constructor for class io.scif.lifesci.SDTInfo
-
Constructs a new SDT header by reading values from the given input source,
populating the given metadata table.
- seek(long) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- seek(int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Moves the current position to the given offset at which the
next read or write occurs.
- seek(int) - Method in interface io.scif.jj2000.j2k.io.RandomAccessIO
-
Moves the current position for the next read or write operation to
offset.
- seek(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Moves the current position for the next read operation to
offset.
- seek(long) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
Invokes the superclass method and sets the position within the
memory mapped buffer.
- seek(long) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
Invokes the superclass method, writes any unwritten data,
and sets the channel position to the supplied parameter.
- seek(long) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- seek(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- segLen - Variable in class io.scif.jj2000.j2k.codestream.reader.CBlkInfo
-
The length of each segment (used with regular termination or
in selective arithmetic bypass coding mode)
- segLengths - Variable in class io.scif.jj2000.j2k.codestream.reader.PktInfo
-
The length of each terminated segment in the packet.
- SegmentedImageInputStream - Class in io.scif.media.imageio.stream
-
A
SegmentedImageInputStream provides a view of a
subset of another ImageInputStream consiting of a series
of segments with given starting positions in the source stream and
lengths.
- SegmentedImageInputStream(ImageInputStream, StreamSegmentMapper) - Constructor for class io.scif.media.imageio.stream.SegmentedImageInputStream
-
Constructs a
SegmentedImageInputStream
given a ImageInputStream as input
and an instance of StreamSegmentMapper.
- SegmentedImageInputStream(ImageInputStream, long[], int[]) - Constructor for class io.scif.media.imageio.stream.SegmentedImageInputStream
-
Constructs a
SegmentedImageInputStream given a
ImageInputStream as input and a list of the starting
positions and lengths of the segments of the source stream.
- SegmentedImageInputStream(ImageInputStream, long[], int, int) - Constructor for class io.scif.media.imageio.stream.SegmentedImageInputStream
-
Constructs a
SegmentedImageInputStream given a
ImageInputStream as input, a list of the starting
positions of the segments of the source stream, the common
length of each segment, and the total length of the segments.
- selectConvexHull(int[], double[], boolean[], int, boolean) - Method in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
Compute the rate-distorsion slopes and selects those that lie in a
convex hull.
- SENSING_METHOD_COLOR_SEQUENTIAL_AREA_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_COLOR_SEQUENTIAL_LINEAR_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_NOT_DEFINED - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_ONE_CHIP_COLOR_AREA_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_THREE_CHIP_COLOR_AREA_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_TRILINEAR_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- SENSING_METHOD_TWO_CHIP_COLOR_AREA_SENSOR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SensingMethod" tag.
- setActiveSrcHeight(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
activeSrcHeight field.
- setActiveSrcHeight(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setActiveSrcMinX(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
activeSrcMinX field.
- setActiveSrcMinX(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setActiveSrcMinY(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
activeSrcMinY field.
- setActiveSrcMinY(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setActiveSrcWidth(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
activeSrcWidth field.
- setActiveSrcWidth(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setAlignROI(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
alignROI
- setBinOffset(int) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setBitOffset(int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- setBitsPerSample(int[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
bitsPerSample field.
- setBitsPerSample(int[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setBypass(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
bypass
- setByteArray(byte[], int, int) - Method in class io.scif.jj2000.j2k.entropy.decoder.ByteInputBuffer
-
Sets the underlying buffer byte array to the given one, with the given
offset and length.
- setByteCount(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
byteCount field.
- setByteCount(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setByteOrder(ByteOrder) - Method in class io.scif.media.imageio.stream.FileChannelImageInputStream
-
- setByteOrder(ByteOrder) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- setByteOrder(ByteOrder) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- setCausalCXInfo(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
causalCXInfo
- setChannels(int) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setCodeBlockSize(int[]) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
codeBlockSize.
- setCodeBlockSize(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
codeBlockSize
- setCodeSegSymbol(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
codeSegSymbol
- setColorConverter(TIFFColorConverter) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the
TIFFColorConverter object describing the color
space of the encoded data in the input stream.
- setColorConverter(TIFFColorConverter) - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageReadParam
-
Sets the
TIFFColorConverter object for the pixel data
being read.
- setColorConverter(TIFFColorConverter, int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageWriteParam
-
Sets the
TIFFColorConverter object describing the
color space to which the input data should be converted for
storage in the input stream.
- setColorMap(char[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
colorMap field.
- setColorMap(char[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setCompDef(int, Object) - Method in class io.scif.jj2000.j2k.entropy.CBlkSizeSpec
-
Sets default value for specified component and specValType tag if
allowed by its priority.
- setCompDef(int, Object) - Method in class io.scif.jj2000.j2k.ModuleSpec
-
Sets default value for specified component and specValType tag if
allowed by its priority.
- setComponentTransformation(boolean) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
componentTransformation.
- setComponentTransformation(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
componentTransformation
- setCompression(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
compression field.
- setCompression(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setCompressionType(String) - Method in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
Sets the compression type to one of the values indicated by
getCompressionTypes.
- setContent(byte[]) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
Sets the box content.
- setCrop(long[]) - Method in class io.scif.cli.AbstractReaderCommand
-
- setData(Object) - Method in class io.scif.jj2000.j2k.image.DataBlk
-
Sets the data array to the specified one.
- setData(Object) - Method in class io.scif.jj2000.j2k.image.DataBlkFloat
-
Sets the data array to the specified one.
- setData(Object) - Method in class io.scif.jj2000.j2k.image.DataBlkInt
-
Sets the data array to the specified one.
- setData(Object) - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
Sets the data array to the specified one.
- setData(Object) - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTDataFloat
-
Sets the data array to the specified one.
- setData(Object) - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTDataInt
-
Sets the data array to the specified one.
- setDataFloat(float[]) - Method in class io.scif.jj2000.j2k.image.DataBlkFloat
-
Sets the data array to the specified one.
- setDataFloat(float[]) - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTDataFloat
-
Sets the data array to the specified one.
- setDataInt(int[]) - Method in class io.scif.jj2000.j2k.image.DataBlkInt
-
Sets the data array to the specified one.
- setDataInt(int[]) - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTDataInt
-
Sets the data array to the specified one.
- setDecodingRate(double) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageReadParam
-
Sets
decodingRate.
- setDecompositionLevel(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
decompositionLevel
- setDefault(Object) - Method in class io.scif.jj2000.j2k.entropy.CBlkSizeSpec
-
Sets default value for this module
- setDefault(Object) - Method in class io.scif.jj2000.j2k.ModuleSpec
-
Sets default value for this module
- setDefaultAttributes(IIOMetadataNode) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
Sets the default attributes, "Length", "Type", and "ExtraLength", to
the provided
IIOMetadataNode.
- setDefaultCreationDate(MetadataStore, String, int) - Method in class io.scif.ome.services.DefaultOMEMetadataService
-
- setDefaultCreationDate(MetadataStore, String, int) - Method in interface io.scif.ome.services.OMEMetadataService
-
Sets a default creation date.
- setDefaultDateEnabled(boolean) - Method in class io.scif.ome.services.DefaultOMEMetadataService
-
- setDefaultDateEnabled(boolean) - Method in interface io.scif.ome.services.OMEMetadataService
-
Disables the setting of a default creation date.
- setDest(Location, int, SCIFIOConfig) - Method in class io.scif.formats.ImarisFormat.Writer
-
- setDest(DataHandle<Location>, int, SCIFIOConfig) - Method in class io.scif.formats.ImarisFormat.Writer
-
- setDestImage(BufferedImage) - Method in class io.scif.media.imageioimpl.plugins.raw.RawRenderedImage
-
- setDestinationBands(int[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
destinationBands field.
- setDestinationBands(int[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstHeight(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstHeight field.
- setDstHeight(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstMinX(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstMinX field.
- setDstMinX(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstMinY(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstMinY field.
- setDstMinY(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstWidth(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstWidth field.
- setDstWidth(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstXOffset(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstXOffset field.
- setDstXOffset(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setDstYOffset(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
dstYOffset field.
- setDstYOffset(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setEncoding(String) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- setEncodingRate(double) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
encodingRate.
- setEncodingRate(double) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
encodingRate
- setEPH(boolean) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
EPH.
- setEPH(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
EPH
- setExtraLength(long) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
Sets the box extra length length to the provided value.
- setExtraSamples(int[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
extraSamples field.
- setExtraSamples(int[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setFilter(String) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
filter.
- setFilters(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
filters
- setFromTree(String, Node) - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- setFromTree(String, Node) - Method in class io.scif.media.imageioimpl.plugins.gif.GIFStreamMetadata
-
- setFromTree(String, Node) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KMetadata
-
- setFromTree(String, Node) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
- setFromTree(String, Node) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPMetadata
-
- setGuardBits(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
guardBits
- setHeaderEncoder(HeaderEncoder) - Method in class io.scif.jj2000.j2k.entropy.encoder.PostCompRateAllocator
-
Keep a reference to the header encoder.
- setHeight(int) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
- setImage(BufferedImage) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
image field.
- setImage(BufferedImage) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setImgResLevel(int) - Method in interface io.scif.jj2000.j2k.wavelet.synthesis.InvWT
-
Sets the image reconstruction resolution level.
- setImgResLevel(int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.InvWTAdapter
-
Sets the image reconstruction resolution level.
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageReader
-
Overrides the method defined in the superclass.
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReader
-
Overrides the method defined in the superclass.
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.pcx.PCXImageReader
-
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageReader
-
Overrides the method defined in the superclass.
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageReader
-
Overrides the method defined in the superclass.
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- setInput(Object, boolean, boolean) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
Overrides the method defined in the superclass.
- setLayers(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets the
layers
- setLenCalcType(int) - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
Set the length calculation type to the specified type
- setLength(long) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- setLength(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
Sets the box length to the provided value.
- setLineWidth(int) - Method in class io.scif.jj2000.j2k.util.MsgPrinter
-
Sets the line width to the specified value.
- setLossless(boolean) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
lossless.
- setLossless(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
lossless
- setMainCompDefDecompType(int, int, int) - Method in class io.scif.jj2000.j2k.wavelet.WTDecompSpec
-
Sets the "component main default" decomposition type and number of
levels for the specified component.
- setMap(String) - Method in class io.scif.cli.AbstractReaderCommand
-
- setMaxBitDepth(int) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
Set the maximum sample size and maximum sample value.
- setMergeIntensity(boolean) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setMergeIntensity(boolean) - Method in class io.scif.lifesci.SDTFormat.Parser
-
- setMetadata(Metadata) - Method in class io.scif.formats.ImarisFormat.Writer
-
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
Sets the value of the
metadata field.
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
metadata field.
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFEXIFJPEGCompressor
-
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Sets the value of the
metadata field.
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFJPEGCompressor
-
Sets the value of the
metadata field.
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFT4Compressor
-
Sets the value of the
metadata field.
- setMetadata(IIOMetadata) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setMethodForMQLengthCalc(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
methodForMQLengthCalc
- setMethodForMQTermination(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
methodForMQTermination
- setMinX(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
minX
- setMinY(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
minY
- setNoROIDescaling(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReadParamJava
-
Sets
noROIDescaling
- setNumDecompositionLevels(int) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
numDecompositionLevels.
- setOffset(long) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
offset field.
- setOffset(long) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setOrder(ByteOrder) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.pcx.PCXImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- setOutput(Object) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageWriter
-
- setPackedBinaryData(byte[], WritableRaster, Rectangle) - Static method in class io.scif.media.imageioimpl.common.ImageUtil
-
Sets the supplied
Raster's data from an array
of packed binary data of the form returned by
getPackedBinaryData().
- setPacketPerTilePart(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
packetPerTilePart
- setPackPacketHeaderInMain(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
packPacketHeaderInMain
- setPackPacketHeaderInTile(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
packPacketHeaderInTile
- setParsingEnabled(boolean) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageReadParamJava
-
Sets
parsingEnabled
- setPhotometricInterpretation(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
photometricInterpretation
field.
- setPhotometricInterpretation(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setPlanar(boolean) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
planar field.
- setPlanar(boolean) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setPrecinctPartition(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
precinctPartition
- setProgressionName(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
progressionName
- setProgressionType(String) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
progressionType.
- setProgressionType(LayersInfo, String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
progressionType
- setQuantizationStep(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
quantizationStep
- setQuantizationType(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
quantizationType
- setRaw(boolean) - Method in class io.scif.media.imageio.plugins.pnm.PNMImageWriteParam
-
Sets the representation to be used.
- setReader(IFormatReader) - Method in class io.scif.bf.BioFormatsFormat.Metadata
-
- setReader(ImageReader) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
reader field.
- setReader(ImageReader) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setResetMQ(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
resetMQ
- setResolution(int) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageReadParam
-
Sets
resolution.
- setROIs(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
ROIs
- setRoot(OMEXMLMetadata) - Method in class io.scif.ome.OMEMetadata
-
Sets the root for this Metadata
- setSampleFormat(int[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
sampleFormat field.
- setSampleFormat(int[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSamplesPerPixel(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
samplesPerPixel field.
- setSamplesPerPixel(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSDTInfo(SDTInfo) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setSegmentLength(int) - Method in class io.scif.media.imageio.stream.StreamSegment
-
Sets the length of the segment.
- setSOP(boolean) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
SOP.
- setSOP(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
SOP
- setSourceBands(int[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
sourceBands field.
- setSourceBands(int[]) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Override the method setSourceBands in the super class.
- setSourceBands(int[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSourceSubsampling(int, int, int, int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Override the method setSourceSubsampling in the super class.
- setSourceXOffset(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
sourceXOffset field.
- setSourceXOffset(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSourceYOffset(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
sourceYOffset.
- setSourceYOffset(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSrcHeight(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
srcHeight field.
- setSrcHeight(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSrcMinX(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
srcMinX field.
- setSrcMinX(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSrcMinY(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
srcMinY field.
- setSrcMinY(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSrcWidth(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
srcWidth field.
- setSrcWidth(int) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setStartLevelROI(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets the
startLevelROI
- setStartPos(long) - Method in class io.scif.media.imageio.stream.StreamSegment
-
Sets the starting position of the segment.
- setStream(ImageOutputStream) - Method in class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
Sets the
ImageOutputStream to be written.
- setStream(ImageInputStream) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
stream field.
- setStream(ImageOutputStream) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWCompressor
-
- setStream(ImageInputStream) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- setSubsampleX(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
subsampleX field.
- setSubsampleY(int) - Method in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
Sets the value of the
subsampleY field.
- setTerminateOnByte(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Sets
terminateOnByte
- setTermType(int) - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
Set termination type to the specified type
- setThreadConcurrency(int) - Static method in class io.scif.jj2000.j2k.util.NativeServices
-
Sets the concurrency level of the threading system of the Java Virtual
Machine (JVM) to the specified level.
- setTIFFCompressor(TIFFCompressor) - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageWriteParam
-
Sets the
TIFFCompressor object to be used by the
ImageWriter to encode each image strip or tile.
- setTIFFDecompressor(TIFFDecompressor) - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageReadParam
-
Sets the
TIFFDecompressor object to be used by the
ImageReader to decode each image strip or tile.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.codestream.reader.BitstreamReaderAgent
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.codestream.reader.FileBitstreamReaderAgent
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.forwcomptransf.ForwCompTransf
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in interface io.scif.jj2000.j2k.image.ImgData
-
Changes the current tile, given the new indices.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.ImgDataAdapter
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.ImgDataJoiner
-
Changes the current tile, given the new coordinates.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.input.ImgReader
-
Changes the current tile, given the new coordinates.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.invcomptransf.InvCompTransf
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.image.Tiler
-
Changes the current tile, given the new tile indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.quantization.dequantizer.Dequantizer
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.roi.encoder.ROIScaler
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.wavelet.analysis.ForwWTFull
-
Changes the current tile, given the new coordinates.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.InvWTAdapter
-
Changes the current tile, given the new indices.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.InvWTFull
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in interface io.scif.jj2000.j2k.wavelet.synthesis.MultiResImgData
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.MultiResImgDataAdapter
-
Changes the current tile, given the new indexes.
- setTile(int, int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.RenderedImageSrc
-
Changes the current tile, given the new coordinates.
- setTileCompVal(int, int, Object) - Method in class io.scif.jj2000.j2k.entropy.CBlkSizeSpec
-
Sets value for specified tile-component.
- setTileCompVal(int, int, Object) - Method in class io.scif.jj2000.j2k.ModuleSpec
-
Sets value for specified tile-component.
- setTileDef(int, Object) - Method in class io.scif.jj2000.j2k.entropy.CBlkSizeSpec
-
Sets default value for specified tile and specValType tag if allowed by
its priority.
- setTileDef(int, Object) - Method in class io.scif.jj2000.j2k.ModuleSpec
-
Sets default value for specified tile and specValType tag if
allowed by its priority.
- setTileOfTileParts(int) - Method in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Sets the tile of each tile part in order.
- setTiling(int, int, int, int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriteParamJava
-
Override the method setTiling in the super class.
- setTimeBase(double) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setTimeBins(int) - Method in class io.scif.lifesci.SDTFormat.Metadata
-
- setTopDown(boolean) - Method in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
If set, the data will be written out in a top-down manner, the first
scanline being written first.
- setUnpackedBinaryData(byte[], WritableRaster, Rectangle) - Static method in class io.scif.media.imageioimpl.common.ImageUtil
-
Copies data into the packed array of the
Raster
from an array of unpacked data of the form returned by
getUnpackedBinaryData().
- setup - Variable in class io.scif.lifesci.SDTInfo
-
- SETUP_IDENTIFIER - Static variable in class io.scif.lifesci.SDTInfo
-
For .set files (setup only).
- setupLength - Variable in class io.scif.lifesci.SDTInfo
-
Length of the setup data.
- setupOffs - Variable in class io.scif.lifesci.SDTInfo
-
Offset of the setup text data (system parameters, display parameters, trace
parameters etc.).
- setValue(int, int, int) - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Changes the value of a leaf in the tag tree.
- setValues(int[]) - Method in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Sets the values of the leafs to the new set of values and
updates the tag tree accordingly.
- setVariant(int) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
Sets the variant: '1' - '6'.
- setWidth(int) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMMetadata
-
- setWriteCodeStreamOnly(boolean) - Method in class io.scif.media.imageio.plugins.jpeg2000.J2KImageWriteParam
-
Sets
writeCodeStreamOnly.
- setWriter(ImageWriter) - Method in class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
Sets the value of the
writer field.
- sgcod_mct - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- sgcod_nl - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- sgcod_po - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- SHARPNESS_HARD - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Sharpness" tag.
- SHARPNESS_NORMAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Sharpness" tag.
- SHARPNESS_SOFT - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "Sharpness" tag.
- SHLIB_NAME - Static variable in class io.scif.jj2000.j2k.util.NativeServices
-
The name of the shared library containing the implementation of the
native methods: 'jj2000'.
- Show - Class in io.scif.cli.show
-
Opens a dataset for viewing.
- Show() - Constructor for class io.scif.cli.show.Show
-
- SignatureBox - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
This class is defined to represent a Signature Box of JPEG JP2
file format.
- SignatureBox() - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.SignatureBox
-
Constructs a
SignatureBox.
- SignatureBox(Node) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.SignatureBox
-
Constructs a
SignatureBox based on the provided
org.w3c.dom.Node.
- SignatureBox(byte[]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.SignatureBox
-
Constructs a
SignatureBox based on the provided
byte array.
- SimpleCMYKColorSpace - Class in io.scif.media.imageioimpl.common
-
Singleton class representing a simple, mathematically defined CMYK
color space.
- SimpleRenderedImage - Class in io.scif.media.imageioimpl.common
-
- SimpleRenderedImage() - Constructor for class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
- singleInstance(String) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KMetadataFormat
-
- SingleTileRenderedImage - Class in io.scif.media.imageioimpl.common
-
A simple class that provides RenderedImage functionality
given a Raster and a ColorModel.
- SingleTileRenderedImage(Raster, ColorModel) - Constructor for class io.scif.media.imageioimpl.common.SingleTileRenderedImage
-
Constructs a SingleTileRenderedImage based on a Raster
and a ColorModel.
- siz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Reference to the SIZ marker segment found in main header
- SIZ() - Constructor for class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- SIZ - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
SIZ marker (Image and tile size): 0xFF51
- size() - Method in class io.scif.jj2000.j2k.entropy.encoder.ByteOutputBuffer
-
Returns the number of valid bytes in the output buffer (count class
variable).
- skip(long) - Method in class io.scif.media.imageioimpl.plugins.clib.InputStreamAdapter
-
- skip(long) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.ImageInputStreamWrapper
-
- skipBytes(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- skipBytes(int) - Method in interface io.scif.jj2000.j2k.io.BinaryDataInput
-
Skips n bytes from the input.
- skipBytes(int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Skips n bytes from the input.
- skipBytes(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Skips 'n' bytes from the input.
- skipBytes(int) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- skipBytes(long) - Method in class io.scif.media.imageio.stream.RawImageInputStream
-
- skipBytes(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
- skipMSBP - Variable in class io.scif.jj2000.j2k.entropy.CodedCBlk
-
The number of skipped most significant bit-planes.
- slice - Variable in class io.scif.formats.imaris.PipelineImage
-
- SOC - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Start of codestream (SOC): 0xFF4F
- SOD - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Start of data (SOD): 0xFF93
- SOD_FOUND - Static variable in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Flag bit for SOD marker segment found
- SOI - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFJPEGDecompressor
-
- SOP - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Start pf packet (SOP): 0xFF91
- SOP_LENGTH - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Length of SOP marker (in bytes)
- sops - Variable in class io.scif.jj2000.j2k.decoder.DecoderSpecs
-
The Start Of Packet (SOP) markers specifications
- sortFlag - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- sortFlag - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFStreamMetadata
-
- sot - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Reference to the SOT marker segments found in tile-part headers.
- SOT() - Constructor for class io.scif.jj2000.j2k.codestream.HeaderInfo.SOT
-
- SOT - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Start of tile-part (SOT): 0xFF90
- source() - Method in class io.scif.bf.ome.BioFormatsTranslator.BioFormatsOMETranslator
-
- source() - Method in class io.scif.ome.translators.APNGTranslator.APNGOMETranslator
-
- source() - Method in class io.scif.ome.translators.APNGTranslator.OMEAPNGTranslator
-
- source() - Method in class io.scif.ome.translators.BMPTranslator.BMPOMETranslator
-
- source() - Method in class io.scif.ome.translators.DefaultOMETranslator
-
- source() - Method in class io.scif.ome.translators.DICOMTranslator.DICOMOMETranslator
-
- source() - Method in class io.scif.ome.translators.EPSTranslator.OMEEPSTranslator
-
- source() - Method in class io.scif.ome.translators.ICSTranslator.ICSOMETranslator
-
- source() - Method in class io.scif.ome.translators.ICSTranslator.OMEICSTranslator
-
- source() - Method in class io.scif.ome.translators.MicromanagerTranslator.MicromanagerOMETranslator
-
- source() - Method in class io.scif.ome.translators.NRRDTranslator.NRRDOMETranslator
-
- source() - Method in class io.scif.ome.translators.OBFTranslator.OBFOMETranslator
-
- source() - Method in class io.scif.ome.translators.TIFFTranslator.OMETIFFTranslator
-
- source() - Method in class io.scif.ome.translators.TIFFTranslator.TIFFOMETranslator
-
- sourceBands - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The sequence of source bands that are to be copied into the
destination.
- sources - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The image's sources, stored in a Vector.
- sourceXOffset - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The source X offset used, along with
dstXOffset
and subsampleX, to map between horizontal source
and destination pixel coordinates.
- sourceYOffset - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The source Y offset used, along with
dstYOffset
and subsampleY, to map between vertical source and
destination pixel coordinates.
- spcoc_ch - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcoc_cs - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcoc_cw - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcoc_ndl - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcoc_ps - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcoc_t - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
- spcod_ch - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- spcod_cs - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- spcod_cw - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- spcod_ndl - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- spcod_ps - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- spcod_t - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
- SPEC_COMP_DEF - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for "component default" specification
- SPEC_DEF - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for default specification
- SPEC_TILE_COMP - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for a "tile-component" specification
- SPEC_TILE_DEF - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for "tile default" specification
- SPEC_TYPE_COMP - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for a specification module that applies only to
components
- SPEC_TYPE_TILE - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for a specification module that applies only to
tiles
- SPEC_TYPE_TILE_COMP - Static variable in class io.scif.jj2000.j2k.ModuleSpec
-
The identifier for a specification module that applies both to
tiles and components
- specified - Variable in class io.scif.jj2000.j2k.ModuleSpec
-
The specified value in string format
- specType - Variable in class io.scif.jj2000.j2k.ModuleSpec
-
The type of the specification module
- specValType - Variable in class io.scif.jj2000.j2k.ModuleSpec
-
The spec type for each tile-component.
- specValType - Variable in class io.scif.jj2000.j2k.wavelet.WTFilterSpec
-
The spec type for each tile and component.
- SPEED_REF_KILOMETERS_PER_HOUR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A value to be used with the "GPSSpeedRef" tag.
- SPEED_REF_KNOTS - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A value to be used with the "GPSSpeedRef" tag.
- SPEED_REF_MILES_PER_HOUR - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A value to be used with the "GPSSpeedRef" tag.
- split(WaveletFilter, WaveletFilter) - Method in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
Splits the current subband in its four subbands.
- split(WaveletFilter, WaveletFilter) - Method in class io.scif.jj2000.j2k.wavelet.Subband
-
Splits the current subband in its four subbands.
- split(WaveletFilter, WaveletFilter) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
Splits the current subband in its four subbands.
- spqcc - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCC
-
- spqcd - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCD
-
- sprgn - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.RGN
-
- sqcc - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCC
-
- sqcd - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCD
-
- SQCX_EXP_MASK - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Exponent bitmask in SPQCX when no quantization: 3
- SQCX_EXP_SHIFT - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Exponent shift in SPQCX when no quantization: 3
- SQCX_GB_MSK - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Guard bits mask in SQCX field: 7
- SQCX_GB_SHIFT - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Guard bits shift in SQCX field: 5
- SQCX_NO_QUANTIZATION - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
No quantization (i.e.
- SQCX_SCALAR_DERIVED - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Scalar derived (i.e.
- SQCX_SCALAR_EXPOUNDED - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Scalar expounded (i.e.
- src - Variable in class io.scif.jj2000.j2k.entropy.decoder.EntropyDecoder
-
The bit stream transport from where to get the compressed data
(the source)
- src - Variable in class io.scif.jj2000.j2k.entropy.encoder.EntropyCoder
-
The source of quantized wavelet coefficients
- src - Variable in class io.scif.jj2000.j2k.entropy.encoder.PostCompRateAllocator
-
The source of entropy coded data
- src - Variable in class io.scif.jj2000.j2k.quantization.dequantizer.Dequantizer
-
The entropy decoder from where to get the quantized data (the
source).
- src - Variable in class io.scif.jj2000.j2k.quantization.quantizer.Quantizer
-
The source of wavelet transform coefficients
- src - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- srcColorModel - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- srcHeight - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The height of the source region being decoded from the source
stream.
- srcMinX - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The X coordinate of the upper-left pixel of the source region
being decoded from the source stream.
- srcMinY - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The Y coordinate of the upper-left pixel of the source region
being decoded from the source stream.
- srcRaster - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- srcWidth - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The width of the source region being decoded from the source
stream.
- srgn - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.RGN
-
- SRGN_IMPLICIT - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Implicit (i.e.
- ssiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- SSIZ_DEPTH_BITS - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Component bitdepth bits in Ssiz field in SIZ marker: 7
- sss - Variable in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
Error resilience segment symbol use specifications
- status - Variable in class io.scif.lifesci.SDTInfo
-
Last SPC_test_state return value (status).
- STATUS_MEASUREMENT_IN_PROGRESS - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A value to be used with the "GPSStatus" tag.
- STATUS_MEASUREMENT_INTEROPERABILITY - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A value to be used with the "GPSStatus" tag.
- StdDequantizer - Class in io.scif.jj2000.j2k.quantization.dequantizer
-
This class implements a scalar dequantizer with deadzone.
- StdDequantizer(CBlkQuantDataSrcDec, int[], DecoderSpecs) - Constructor for class io.scif.jj2000.j2k.quantization.dequantizer.StdDequantizer
-
Initializes the source of compressed data.
- StdDequantizerParams - Class in io.scif.jj2000.j2k.quantization.dequantizer
-
This class holds the parameters for the scalar deadzone dequantizer
(StdDequantizer class) for the current tile.
- StdDequantizerParams() - Constructor for class io.scif.jj2000.j2k.quantization.dequantizer.StdDequantizerParams
-
- StdEntropyCoder - Class in io.scif.jj2000.j2k.entropy.encoder
-
This class implements the JPEG 2000 entropy coder, which codes stripes in
code-blocks.
- StdEntropyCoder(CBlkQuantDataSrcEnc, CBlkSizeSpec, PrecinctSizeSpec, StringSpec, StringSpec, StringSpec, StringSpec, StringSpec, StringSpec, StringSpec) - Constructor for class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
Instantiates a new entropy coder engine, with the specified source of
data, nominal block width and height.
- StdEntropyCoderOptions - Interface in io.scif.jj2000.j2k.entropy
-
This interface define the constants that identify the possible options for
the entropy coder, as well some fixed parameters of the JPEG 2000 entropy
coder.
- StdEntropyDecoder - Class in io.scif.jj2000.j2k.entropy.decoder
-
This class implements the JPEG 2000 entropy decoder, which codes stripes in
code-blocks.
- StdEntropyDecoder(CodedCBlkDataSrcDec, DecoderSpecs, boolean, boolean, int) - Constructor for class io.scif.jj2000.j2k.entropy.decoder.StdEntropyDecoder
-
Instantiates a new entropy decoder engine, with the specified source of
data, nominal block width and height.
- StdQuantizer - Class in io.scif.jj2000.j2k.quantization.quantizer
-
This class implements scalar quantization of integer or floating-point
valued source data.
- StdQuantizer(CBlkWTDataSrc, J2KImageWriteParamJava) - Constructor for class io.scif.jj2000.j2k.quantization.quantizer.StdQuantizer
-
Initializes the source of wavelet transform coefficients.
- steps - Variable in class io.scif.lifesci.SDTInfo
-
- stepSize - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The quantization step size of the code-block.
- stepWMSE - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The contribution to the MSE or WMSE error that would result in the
image if there was an error of exactly one quantization step size in
the sample of the subband.
- stopt - Variable in class io.scif.lifesci.SDTInfo
-
- stopTime - Variable in class io.scif.lifesci.SDTInfo
-
Time from start to - disarm (simple measurement) - or to the end of the
cycle (for complex measurement).
- stream - Variable in class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
The
ImageOutputStream to be written.
- stream - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The
ImageInputStream containing the TIFF source
data.
- STREAM_METADATA_NAME - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFBaseJPEGCompressor
-
- StreamMsgLogger - Class in io.scif.jj2000.j2k.util
-
This class implements the MsgLogger interface for streams.
- StreamMsgLogger(OutputStream, OutputStream, int) - Constructor for class io.scif.jj2000.j2k.util.StreamMsgLogger
-
Constructs a StreamMsgLogger that uses 'outstr' as the 'out' stream,
and 'errstr' as the 'err' stream.
- StreamMsgLogger(Writer, Writer, int) - Constructor for class io.scif.jj2000.j2k.util.StreamMsgLogger
-
Constructs a StreamMsgLogger that uses 'outstr' as the 'out' stream,
and 'errstr' as the 'err' stream.
- StreamMsgLogger(PrintWriter, PrintWriter, int) - Constructor for class io.scif.jj2000.j2k.util.StreamMsgLogger
-
Constructs a StreamMsgLogger that uses 'outstr' as the 'out' stream,
and 'errstr' as the 'err' stream.
- StreamSegment - Class in io.scif.media.imageio.stream
-
A utility class representing a segment within a stream as a
long starting position and an int
length.
- StreamSegment() - Constructor for class io.scif.media.imageio.stream.StreamSegment
-
Constructs a
StreamSegment.
- StreamSegment(long, int) - Constructor for class io.scif.media.imageio.stream.StreamSegment
-
Constructs a
StreamSegment with a
given starting position and length.
- StreamSegmentMapper - Interface in io.scif.media.imageio.stream
-
An interface for use with the
SegmentedImageInputStream
class.
- StringFormatException - Exception in io.scif.jj2000.j2k.util
-
Thrown to indicate that the application has attempted to parse a
badly formatted string.
- StringFormatException() - Constructor for exception io.scif.jj2000.j2k.util.StringFormatException
-
Creates the exception with an empty messgage.
- StringFormatException(String) - Constructor for exception io.scif.jj2000.j2k.util.StringFormatException
-
Creates the exception with the specified detail message.
- StringSpec - Class in io.scif.jj2000.j2k
-
This class extends ModuleSpec class in order to hold tile-component
specifications using Strings.
- StringSpec(int, int, byte) - Constructor for class io.scif.jj2000.j2k.StringSpec
-
Constructs an empty 'StringSpec' with specified number of
tile and components.
- StringSpec(int, int, byte, String, String[], J2KImageWriteParamJava, String) - Constructor for class io.scif.jj2000.j2k.StringSpec
-
Constructs a new 'StringSpec' for the specified number of
components:tiles and the arguments of optName
option.
- STRIPE_HEIGHT - Static variable in interface io.scif.jj2000.j2k.entropy.StdEntropyCoderOptions
-
The stripe height.
- subb_HH - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The reference to the HH subband resulting from the
decomposition of this subband.
- subb_HH - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
The reference to the HH subband resulting from the
decomposition of this subband.
- subb_HL - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The reference to the HL subband (horizontal high-pass)
resulting from the decomposition of this subband.
- subb_HL - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
The reference to the HL subband (horizontal high-pass)
resulting from the decomposition of this subband.
- subb_LH - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The reference to the LH subband (vertical high-pass) resulting
from the decomposition of this subband.
- subb_LH - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
The reference to the LH subband (vertical high-pass) resulting
from the decomposition of this subband.
- subb_LL - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The reference to the LL subband resulting from the
decomposition of this subband.
- subb_LL - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
The reference to the LL subband resulting from the
decomposition of this subband.
- Subband - Class in io.scif.jj2000.j2k.wavelet
-
This abstract class represents a subband in a bidirectional tree structure
that describes the subband decomposition for a wavelet transform.
- Subband() - Constructor for class io.scif.jj2000.j2k.wavelet.Subband
-
Creates a Subband element with all the default values.
- Subband(int, int, int, int, int, WaveletFilter[], WaveletFilter[]) - Constructor for class io.scif.jj2000.j2k.wavelet.Subband
-
Creates the top-level node and the entire subband tree, with the
top-level dimensions, the number of decompositions, and the
decomposition tree as specified.
- SubbandAn - Class in io.scif.jj2000.j2k.wavelet.analysis
-
This class represents a subband in a bidirectional tree structure
that describes the subband decomposition for a wavelet transform,
specifically for the analysis side.
- SubbandAn() - Constructor for class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
Creates a SubbandAn element with all the default values.
- SubbandAn(int, int, int, int, int, WaveletFilter[], WaveletFilter[]) - Constructor for class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
Creates the top-level node and the entire subband tree, with
the top-level dimensions, the number of decompositions, and the
decomposition tree as specified.
- SubbandRectROIMask - Class in io.scif.jj2000.j2k.roi.encoder
-
This class describes the ROI mask for a single subband.
- SubbandRectROIMask(Subband, int[], int[], int[], int[], int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.SubbandRectROIMask
-
The constructor of the SubbandROIMask takes the dimensions of the
subband as parameters.
- SubbandROIMask - Class in io.scif.jj2000.j2k.roi.encoder
-
This abstract class describes the ROI mask for a single subband.
- SubbandROIMask(int, int, int, int) - Constructor for class io.scif.jj2000.j2k.roi.encoder.SubbandROIMask
-
The constructor of the SubbandROIMask takes the dimensions of the
subband as parameters
- SubbandSyn - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This class represents a subband in a tree structure that describes
the subband decomposition for a wavelet transform, specifically for
the syhthesis side.
- SubbandSyn() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
Creates a SubbandSyn element with all the default values.
- SubbandSyn(int, int, int, int, int, WaveletFilter[], WaveletFilter[]) - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
Creates the top-level node and the entire subband tree, with
the top-level dimensions, the number of decompositions, and the
decomposition tree as specified.
- subbTrees - Variable in class io.scif.jj2000.j2k.codestream.reader.BitstreamReaderAgent
-
The subband trees for each component in the current tile.
- SUBFILE_TYPE_FULL_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SubfileType" tag.
- SUBFILE_TYPE_REDUCED_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SubfileType" tag.
- SUBFILE_TYPE_SINGLE_PAGE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "SubfileType" tag.
- SUBJECT_DISTANCE_RANGE_CLOSE_VIEW - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SubjectDistanceRange" tag.
- SUBJECT_DISTANCE_RANGE_DISTANT_VIEW - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SubjectDistanceRange" tag.
- SUBJECT_DISTANCE_RANGE_MACRO - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SubjectDistanceRange" tag.
- SUBJECT_DISTANCE_RANGE_UNKNOWN - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "SubjectDistanceRange" tag.
- subsampleX - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The horizontal subsampling factor.
- subsampleY - Variable in class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
The vertical subsampling factor.
- suffixSufficient() - Method in class io.scif.bf.BioFormatsFormat.Checker
-
- synFD - Variable in class io.scif.lifesci.SDTInfo
-
- synHF - Variable in class io.scif.lifesci.SDTInfo
-
- synTH - Variable in class io.scif.lifesci.SDTInfo
-
- synthetize_hpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilter
-
Reconstructs the output signal by the synthesis filter,
recomposing the low-pass and high-pass input signals in one
output signal.
- synthetize_hpf(float[], int, int, int, float[], int, int, int, float[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloat
-
A specific version of the synthetize_hpf() method that works on float
data.
- synthetize_hpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloat
-
The general version of the synthetize_hpf() method, it just calls
the specialized version.
- synthetize_hpf(float[], int, int, int, float[], int, int, int, float[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloatLift9x7
-
An implementation of the synthetize_hpf() method that works on int
data, for the inverse 9x7 wavelet transform using the lifting
scheme.
- synthetize_hpf(int[], int, int, int, int[], int, int, int, int[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterInt
-
A specific version of the synthetize_hpf() method that works on int
data.
- synthetize_hpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterInt
-
The general version of the synthetize_hpf() method, it just calls
the specialized version.
- synthetize_hpf(int[], int, int, int, int[], int, int, int, int[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterIntLift5x3
-
An implementation of the synthetize_hpf() method that works on int
data, for the inverse 5x3 wavelet transform using thelifting
scheme.
- synthetize_lpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilter
-
Reconstructs the output signal by the synthesis filter,
recomposing the low-pass and high-pass input signals in one
output signal.
- synthetize_lpf(float[], int, int, int, float[], int, int, int, float[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloat
-
A specific version of the synthetize_lpf() method that works on float
data.
- synthetize_lpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloat
-
The general version of the synthetize_lpf() method, it just calls
the specialized version.
- synthetize_lpf(float[], int, int, int, float[], int, int, int, float[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloatLift9x7
-
An implementation of the synthetize_lpf() method that works on int
data, for the inverse 9x7 wavelet transform using the lifting
scheme.
- synthetize_lpf(int[], int, int, int, int[], int, int, int, int[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterInt
-
A specific version of the synthetize_lpf() method that works on int
data.
- synthetize_lpf(Object, int, int, int, Object, int, int, int, Object, int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterInt
-
The general version of the synthetize_lpf() method, it just calls
the specialized version.
- synthetize_lpf(int[], int, int, int, int[], int, int, int, int[], int, int) - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterIntLift5x3
-
An implementation of the synthetize_lpf() method that works on int
data, for the inverse 5x3 wavelet transform using the lifting
scheme.
- SynWTFilter - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This abstract class defines the methods of all synthesis wavelet
filters.
- SynWTFilter() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilter
-
- SynWTFilterFloat - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This extends the synthesis wavelet filter general definitions of
SynWTFilter by adding methods that work for float data
specifically.
- SynWTFilterFloat() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloat
-
- SynWTFilterFloatLift9x7 - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This class inherits from the synthesis wavelet filter definition for int
data.
- SynWTFilterFloatLift9x7() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloatLift9x7
-
- SynWTFilterInt - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This extends the synthesis wavelet filter general definitions of
SynWTFilter by adding methods that work for int data
specifically.
- SynWTFilterInt() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterInt
-
- SynWTFilterIntLift5x3 - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This class inherits from the synthesis wavelet filter definition for int
data.
- SynWTFilterIntLift5x3() - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterIntLift5x3
-
- SynWTFilterSpec - Class in io.scif.jj2000.j2k.wavelet.synthesis
-
This class extends ModuleSpec class for synthesis filters
specification holding purpose.
- SynWTFilterSpec(int, int, byte) - Constructor for class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterSpec
-
Constructs a new 'SynWTFilterSpec' for the specified number of
components and tiles.
- synZC - Variable in class io.scif.lifesci.SDTInfo
-
- SZ_INCR - Static variable in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
The increment size for the buffer, 16 bytes.
- SZ_INIT - Static variable in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
The initial size for the buffer, 32 bytes.
T
- T4_OPTIONS_2D_CODING - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A mask to be used with the "T4Options" tag.
- T4_OPTIONS_EOL_BYTE_ALIGNED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A mask to be used with the "T4Options" tag.
- T4_OPTIONS_UNCOMPRESSED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A mask to be used with the "T4Options" tag.
- T6_OPTIONS_UNCOMPRESSED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A mask to be used with the "T6Options" tag.
- T_STRING - Static variable in class io.scif.lifesci.SDTInfo
-
- tables - Variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFJPEGDecompressor
-
- tacG - Variable in class io.scif.lifesci.SDTInfo
-
- tacLH - Variable in class io.scif.lifesci.SDTInfo
-
- tacLL - Variable in class io.scif.lifesci.SDTInfo
-
- tacOF - Variable in class io.scif.lifesci.SDTInfo
-
- tacR - Variable in class io.scif.lifesci.SDTInfo
-
- TAG_APERTURE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the lens aperture (type RATIONAL).
- TAG_ARTIST - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Artist" tag.
- TAG_BAD_FAX_LINES - Static variable in class io.scif.media.imageio.plugins.tiff.FaxTIFFTagSet
-
Tag indicating the number of bad fax lines (type SHORT or LONG).
- TAG_BITS_PER_SAMPLE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "BitsPerSample" tag.
- TAG_BRIGHTNESS_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the value of brightness (type SRATIONAL).
- TAG_CELL_LENGTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "cell_length" tag.
- TAG_CELL_WIDTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Cell_Width" tag.
- TAG_CFA_PATTERN - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the color filter array geometric pattern of
the image sensor when a one-chip color area sensor if used
(type UNDEFINED).
- TAG_CLEAN_FAX_DATA - Static variable in class io.scif.media.imageio.plugins.tiff.FaxTIFFTagSet
-
Tag indicating the number of lines of clean fax data (type
SHORT).
- TAG_COLOR_MAP - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ColorMap" tag.
- TAG_COLOR_SPACE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the color space information (type SHORT).
- TAG_COMPONENTS_CONFIGURATION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag containing the components configuration information (type
UNDEFINED, count = 4).
- TAG_COMPRESSED_BITS_PER_PIXEL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the number of compressed bits per pixel
(type RATIONAL).
- TAG_COMPRESSION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Compression" tag.
- TAG_CONSECUTIVE_BAD_LINES - Static variable in class io.scif.media.imageio.plugins.tiff.FaxTIFFTagSet
-
Tag indicating the number of consecutive bad lines (type
SHORT or LONG).
- TAG_CONTRAST - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the direction of contrast processing applied
by the camera when the image was shot.
- TAG_COPYRIGHT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Copyright" tag.
- TAG_CUSTOM_RENDERED - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the use of special processing on image data,
such as rendering geared to output.
- TAG_DATE_TIME - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "DateTime" tag.
- TAG_DATE_TIME_DIGITIZED - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the date and time when the image was stored as
digital data (type ASCII).
- TAG_DATE_TIME_ORIGINAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the date and time when the original image was
generated (type ASCII).
- TAG_DEVICE_SETTING_DESCRIPTION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating information on the picture-taking conditions
of a particular camera model.
- TAG_DIGITAL_ZOOM_RATIO - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the digital zoom ratio when the image was shot.
- TAG_DOCUMENT_NAME - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "document_name" tag.
- TAG_DOT_RANGE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "DotRange" tag.
- TAG_EXIF_IFD_POINTER - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFParentTIFFTagSet
-
Tag pointing to the EXIF IFD (type LONG).
- TAG_EXIF_VERSION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag containing the EXIF version number (type UNDEFINED, count =
4).
- TAG_EXPOSURE_BIAS_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the exposure bias (type SRATIONAL).
- TAG_EXPOSURE_INDEX - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the exposure index selected on the camera or
input device at the time the image was captured (type
RATIONAL).
- TAG_EXPOSURE_MODE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the exposure mode set when the image was shot.
- TAG_EXPOSURE_PROGRAM - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the class of the programs used to set exposure
when the picture was taken (type SHORT).
- TAG_EXPOSURE_TIME - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the exposure time, in seconds (type RATIONAL).
- TAG_EXTRA_SAMPLES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ExtraSamples" tag.
- TAG_F_NUMBER - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the F number (type RATIONAL).
- TAG_FILE_SOURCE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the image source (type UNDEFINED).
- TAG_FILL_ORDER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "fill_order" tag.
- TAG_FLASH - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the flash firing status and flash return
status (type SHORT).
- TAG_FLASH_ENERGY - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the strobe energy at the time the image was
captured, as measured in Beam Candle Power Seconds (BCPS) (type
RATIONAL).
- TAG_FLASHPIX_VERSION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the FlashPix version number (type UNDEFINED,
count = 4).
- TAG_FOCAL_LENGTH - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the actual focal length of the lens, in
millimeters (type RATIONAL).
- TAG_FOCAL_LENGTH_IN_35MM_FILM - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the equivalent focal length assuming a 35mm film
camera, in millimeters.
- TAG_FOCAL_PLANE_RESOLUTION_UNIT - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
Indicates the unit for measuring FocalPlaneXResolution and
FocalPlaneYResolution (type SHORT).
- TAG_FOCAL_PLANE_X_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
Indicates the number of pixels in the image width (X) direction
per FocalPlaneResolutionUnit on the camera focal plane (type
RATIONAL).
- TAG_FOCAL_PLANE_Y_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
Indicate the number of pixels in the image height (Y) direction
per FocalPlaneResolutionUnit on the camera focal plane (type
RATIONAL).
- TAG_FREE_BYTE_COUNTS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "FreeByteCounts" tag.
- TAG_FREE_OFFSETS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "FreeOffsets" tag.
- TAG_GAIN_CONTROL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the degree of overall image gain adjustment.
- TAG_GEO_ASCII_PARAMS - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to store all ASCII-values GeoKeys.
- TAG_GEO_DOUBLE_PARAMS - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to store all
double-values GeoKeys.
- TAG_GEO_KEY_DIRECTORY - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to store the GeoKey directory.
- TAG_GPS_ALTITUDE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Altitude (type RATIONAL, count = 1).
- TAG_GPS_ALTITUDE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Altitude reference (type BYTE, count = 1);
- TAG_GPS_AREA_INFORMATION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Name of GPS area (type UNDEFINED).
- TAG_GPS_DATE_STAMP - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS date (type ASCII, count 11).
- TAG_GPS_DEST_BEARING - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Bearing of destination (type RATIONAL, count = 1).
- TAG_GPS_DEST_BEARING_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for bearing of destination (type ASCII,
count = 2).
- TAG_GPS_DEST_DISTANCE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Distance to destination (type RATIONAL, count = 1).
- TAG_GPS_DEST_DISTANCE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for distance to destination (type ASCII,
count = 2).
- TAG_GPS_DEST_LATITUDE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Latitude of destination (type RATIONAL, count = 3).
- TAG_GPS_DEST_LATITUDE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for latitude of destination (type
ASCII, count = 2).
- TAG_GPS_DEST_LONGITUDE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Longitude of destination (type RATIONAL,
count = 3).
- TAG_GPS_DEST_LONGITUDE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for longitude of destination (type
ASCII, count = 2).
- TAG_GPS_DIFFERENTIAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS differential correction (type SHORT,
count = 1).
- TAG_GPS_DOP - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Measurement precision (type RATIONAL, count = 1).
- TAG_GPS_IMG_DIRECTION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Direction of image (type RATIONAL, count = 1).
- TAG_GPS_IMG_DIRECTION_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for direction of image (type ASCII,
count = 2).
- TAG_GPS_INFO_IFD_POINTER - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFParentTIFFTagSet
-
Tag pointing to a GPS info IFD (type LONG).
- TAG_GPS_INFO_IFD_POINTER - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
Deprecated.
Superseded by
EXIFParentTIFFTagSet.TAG_GPS_INFO_IFD_POINTER
- TAG_GPS_LATITUDE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Latitude (type RATIONAL, count = 3).
- TAG_GPS_LATITUDE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the North or South latitude (type ASCII, count = 2).
- TAG_GPS_LONGITUDE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Longitude (type RATIONAL, count = 3).
- TAG_GPS_LONGITUDE_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the East or West Longitude (type ASCII, count = 2).
- TAG_GPS_MAP_DATUM - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Geodetic survey data used (type ASCII).
- TAG_GPS_MEASURE_MODE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS measurement mode (type ASCII, count = 2).
- TAG_GPS_PROCESSING_METHOD - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Name of GPS processing method (type UNDEFINED).
- TAG_GPS_SATELLITES - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS satellites used for measurement (type ASCII).
- TAG_GPS_SPEED - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Speed of GPS receiver (type RATIONAL, count = 1).
- TAG_GPS_SPEED_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Speed unit (type ASCII, count = 2).
- TAG_GPS_STATUS - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS receiver status (type ASCII, count = 2).
- TAG_GPS_TIME_STAMP - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS time (atomic clock) (type RATIONAL, count = 3).
- TAG_GPS_TRACK - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Direction of movement (type RATIONAL, count = 1).
- TAG_GPS_TRACK_REF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the Reference for direction of movement (type ASCII,
count = 2).
- TAG_GPS_VERSION_ID - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFGPSTagSet
-
A tag indicating the GPS tag version (type BYTE, count = 4).
- TAG_GRAY_RESPONSE_CURVE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "GrayResponseCurve" tag.
- TAG_GRAY_RESPONSE_UNIT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "GrayResponseUnit" tag.
- TAG_HALFTONE_HINTS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "HalftoneHints" tag.
- TAG_HOST_COMPUTER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "HostComputer" tag.
- TAG_ICC_PROFILE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ICC Profile" tag.
- TAG_IMAGE_DESCRIPTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Image_description" tag.
- TAG_IMAGE_LENGTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ImageLength" tag.
- TAG_IMAGE_UNIQUE_ID - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating an identifier assigned uniquely to each image.
- TAG_IMAGE_WIDTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ImageWidth" tag.
- TAG_INK_NAMES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "InkNames" tag.
- TAG_INK_SET - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "InkSet" tag.
- TAG_INTEROPERABILITY_IFD_POINTER - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag pointing to an interoperability IFD (type LONG).
- TAG_INTEROPERABILITY_INDEX - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFInteroperabilityTagSet
-
A tag indicating the identification of the Interoperability rule
(type ASCII).
- TAG_ISO_SPEED_RATINGS - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the ISO speed and ISO latitude of the camera
or input device, as specified in ISO 12232xiv (type
SHORT).
- TAG_JPEG_AC_TABLES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGACTables" tag.
- TAG_JPEG_DC_TABLES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGDCTables" tag.
- TAG_JPEG_INTERCHANGE_FORMAT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGInterchangeFormat" tag.
- TAG_JPEG_INTERCHANGE_FORMAT_LENGTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGInterchangeFormatLength" tag.
- TAG_JPEG_LOSSLESS_PREDICTORS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGLosslessPredictors" tag.
- TAG_JPEG_POINT_TRANSFORMS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGPointTransforms" tag.
- TAG_JPEG_PROC - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGProc" tag.
- TAG_JPEG_Q_TABLES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGQTables" tag.
- TAG_JPEG_RESTART_INTERVAL - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGRestartInterval" tag.
- TAG_JPEG_TABLES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "JPEGTables" tag.
- TAG_LIGHT_SOURCE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicatingthe kind of light source (type SHORT).
- TAG_MAKE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Make" tag.
- TAG_MAKER_NOTE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating a manufacturer-defined maker note (type
UNDEFINED).
- TAG_MARKER_NOTE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
Deprecated.
Superseded by
EXIFTIFFTagSet.TAG_MAKER_NOTE.
- TAG_MAX_APERTURE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the smallest F number of the lens (type
RATIONAL).
- TAG_MAX_SAMPLE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Max_sample_value" tag.
- TAG_METERING_MODE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the metering mode (type SHORT).
- TAG_MIN_SAMPLE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Min_sample_value" tag.
- TAG_MODEL - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Model" tag.
- TAG_MODEL_PIXEL_SCALE - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to specify the size of raster pixel spacing in
model space units.
- TAG_MODEL_TIE_POINT - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to store raster->model tiepoint pairs.
- TAG_MODEL_TRANSFORMATION - Static variable in class io.scif.media.imageio.plugins.tiff.GeoTIFFTagSet
-
A tag used to specify the transformation matrix between the raster
space and the model space.
- TAG_NEW_SUBFILE_TYPE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "NewSubfileType" tag.
- TAG_NUMBER_OF_INKS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "NumberOfInks" tag.
- TAG_OECF - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the optoelectric conversion function,
specified in ISO 14254xv (type UNDEFINED).
- TAG_ORIENTATION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Orientation" tag.
- TAG_PAGE_NAME - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "PageName" tag.
- TAG_PAGE_NUMBER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "PageNumber" tag.
- TAG_PHOTOMETRIC_INTERPRETATION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "PhotometricInterpretation" tag.
- TAG_PIXEL_X_DIMENSION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the pixel X dimension (type SHORT or LONG).
- TAG_PIXEL_Y_DIMENSION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the pixel Y dimension (type SHORT or LONG).
- TAG_PLANAR_CONFIGURATION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "PlanarConfiguration" tag.
- TAG_PREDICTOR - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Predictor" tag.
- TAG_PRIMARY_CHROMATICITES - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "PrimaryChromaticites" tag.
- TAG_REFERENCE_BLACK_WHITE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ReferenceBlackWhite" tag.
- TAG_RELATED_SOUND_FILE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the name of a related sound file (type ASCII).
- TAG_RESOLUTION_UNIT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "ResolutionUnit" tag.
- TAG_ROWS_PER_STRIP - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Rows_per_strip" tag.
- TAG_S_MAX_SAMPLE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "SMaxSampleValue" tag.
- TAG_S_MIN_SAMPLE_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "SMinSampleValue" tag.
- TAG_SAMPLE_FORMAT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "SampleFormat" tag.
- TAG_SAMPLES_PER_PIXEL - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Samples_per_pixel" tag.
- TAG_SATURATION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the direction of saturation processing
applied by the camera when the image was shot.
- TAG_SCENE_CAPTURE_TYPE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the type of scene that was shot.
- TAG_SCENE_TYPE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the type of scene (type UNDEFINED).
- TAG_SENSING_METHOD - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the sensor type on the camera or input device
(type SHORT).
- TAG_SHARPNESS - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the direction of sharpness processing
applied by the camera when the image was shot.
- TAG_SHUTTER_SPEED_VALUE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the shutter speed (type SRATIONAL).
- TAG_SOFTWARE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Software" tag.
- TAG_SPATIAL_FREQUENCY_RESPONSE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the camera or input device spatial frequency
table and SFR values in the direction of image width, image
height, and diagonal direction, as specified in ISO
12233xvi (type UNDEFINED).
- TAG_SPECTRAL_SENSITIVITY - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the spectral sensitivity of each channel of
the camera used (type ASCII).
- TAG_STRIP_BYTE_COUNTS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Strip_byte_counts" tag.
- TAG_STRIP_OFFSETS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Strip_offsets" tag.
- TAG_SUB_SEC_TIME - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag used to record fractions of seconds for the "DateTime" tag
(type ASCII).
- TAG_SUB_SEC_TIME_DIGITIZED - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag used to record fractions of seconds for the
"DateTimeDigitized" tag (type ASCII).
- TAG_SUB_SEC_TIME_ORIGINAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag used to record fractions of seconds for the
"DateTimeOriginal" tag (type ASCII).
- TAG_SUBFILE_TYPE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "SubfileType" tag.
- TAG_SUBJECT_AREA - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the location and area of the main subject in
the overall scene.
- TAG_SUBJECT_DISTANCE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the distance to the subject, in meters (type
RATIONAL).
- TAG_SUBJECT_DISTANCE_RANGE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the distance to the subject.
- TAG_SUBJECT_LOCATION - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the column and row of the center pixel of the
main subject in the scene (type SHORT, count = 2).
- TAG_T4_OPTIONS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "T4Options" tag.
- TAG_T6_OPTIONS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "T6Options" tag.
- TAG_TARGET_PRINTER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TargetPrinter" tag.
- TAG_THRESHHOLDING - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "Threshholding" tag.
- TAG_TILE_BYTE_COUNTS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TileByteCounts" tag.
- TAG_TILE_LENGTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TileLength" tag.
- TAG_TILE_OFFSETS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TileOffsets" tag.
- TAG_TILE_WIDTH - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TileWidth" tag.
- TAG_TRANSFER_FUNCTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TransferFunction" tag.
- TAG_TRANSFER_RANGE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "TransferRange" tag.
- TAG_USER_COMMENT - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating a user comment (type UNDEFINED).
- TAG_WHITE_BALANCE - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A tag indicating the white balance mode set when the image was shot.
- TAG_WHITE_POINT - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "WhitePoint" tag.
- TAG_X_POSITION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "XPosition" tag.
- TAG_X_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "XResolution" tag.
- TAG_Y_CB_CR_COEFFICIENTS - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "YCbCrCoefficients" tag.
- TAG_Y_CB_CR_POSITIONING - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "YCbCrPositioning" tag.
- TAG_Y_CB_CR_SUBSAMPLING - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "YCbCrSubsampling" tag.
- TAG_Y_POSITION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "YPosition" tag.
- TAG_Y_RESOLUTION - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
Constant specifying the "YResolution" tag.
- TagTreeDecoder - Class in io.scif.jj2000.j2k.codestream.reader
-
This class implements the tag tree decoder.
- TagTreeDecoder(int, int) - Constructor for class io.scif.jj2000.j2k.codestream.reader.TagTreeDecoder
-
Creates a tag tree decoder with 'w' elements along the
horizontal dimension and 'h' elements along the vertical
direction.
- TagTreeEncoder - Class in io.scif.jj2000.j2k.codestream.writer
-
This class implements the tag tree encoder.
- TagTreeEncoder(int, int) - Constructor for class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Creates a tag tree encoder with 'w' elements along the
horizontal dimension and 'h' elements along the vertical
direction.
- TagTreeEncoder(int, int, int[]) - Constructor for class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
Creates a tag tree encoder with 'w' elements along the
horizontal dimension and 'h' elements along the vertical
direction.
- targetRes - Variable in class io.scif.jj2000.j2k.codestream.reader.BitstreamReaderAgent
-
Image resolution level to generate
- TERM_EASY - Static variable in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
The identifier for the easy termination that is simpler than the
'TERM_NEAR_OPT' one but slightly less efficient.
- TERM_FULL - Static variable in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
The identifier fort the termination that uses a full flush.
- TERM_NEAR_OPT - Static variable in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
The identifier for the termination that uses the near optimal length
calculation to terminate the arithmetic codewrod
- TERM_PRED_ER - Static variable in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
The identifier for the predictable termination policy for error
resilience.
- termCodes - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Black and white terminating code table.
- termCodesBlack - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Terminating codes for black runs.
- termCodesWhite - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Terminating codes for white runs.
- terminate() - Method in class io.scif.jj2000.j2k.entropy.encoder.MQCoder
-
This function flushes the remaining encoded bits and makes sure that
enough information is written to the bit stream to be able to finish
decoding, and then it reinitializes the internal state of the MQ coder
but without modifying the context states.
- terminateProgressWatch() - Method in interface io.scif.jj2000.j2k.util.ProgressWatch
-
Terminate the progress watch process
- text - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textBackgroundColor - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textForegroundColor - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textGridHeight - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textGridLeft - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textGridTop - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- textGridWidth - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- ThreadPool - Class in io.scif.jj2000.j2k.util
-
This class implements a thread pool.
- ThreadPool(int, int, String) - Constructor for class io.scif.jj2000.j2k.util.ThreadPool
-
Creates a new thread pool of the given size, thread priority and pool
name.
- THREADS_PRIORITY_INC - Static variable in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
The increase in priority for the compressor threads, currently 3.
- THREADS_PROP_NAME - Static variable in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
The Java system property name for the number of threads to use:
io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder.nthreads
- THRESHHOLDING_NONE - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "Thresholding" tag.
- THRESHHOLDING_ORDERED_DITHER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "Thresholding" tag.
- THRESHHOLDING_RANDOMIZED_DITHER - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "Thresholding" tag.
- tIdx - Variable in class io.scif.jj2000.j2k.image.ImgDataAdapter
-
Index of the current tile
- tIdx - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.MultiResImgDataAdapter
-
Index of the current tile
- TIFF_ASCII - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for null-terminated ASCII strings.
- TIFF_BYTE - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 8 bit unsigned integers.
- TIFF_DOUBLE - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 64 bit IEEE doubles.
- TIFF_FLOAT - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 32 bit IEEE floats.
- TIFF_IFD_POINTER - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for IFD pointer defined in TIFF Tech Note 1 in
TIFF Specification Supplement 1.
- TIFF_LONG - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 32 bit unsigned integers.
- TIFF_RATIONAL - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for pairs of 32 bit unsigned integers.
- TIFF_SBYTE - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 8 bit signed integers.
- TIFF_SHORT - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 16 bit unsigned integers.
- TIFF_SLONG - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 32 bit signed integers.
- TIFF_SRATIONAL - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for pairs of 32 bit signed integers.
- TIFF_SSHORT - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 16 bit signed integers.
- TIFF_UNDEFINED - Static variable in class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Flag for 8 bit uninterpreted bytes.
- TIFFAttrInfo - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFAttrInfo() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFAttrInfo
-
- TIFFBaseJPEGCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
Base class for all possible forms of JPEG compression in TIFF.
- TIFFBaseJPEGCompressor(String, int, boolean, ImageWriteParam) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFBaseJPEGCompressor
-
- TIFFCIELabColorConverter - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFCIELabColorConverter() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFCIELabColorConverter
-
- TIFFColorConverter - Class in io.scif.media.imageio.plugins.tiff
-
An abstract class that performs simple color conversion on 3-banded source
images, for use with the TIFF Image I/O plug-in.
- TIFFColorConverter() - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFColorConverter
-
Constructs an instance of a
TIFFColorConverter.
- TIFFCompressionTypes - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
Supported TIFF compression types.
- TIFFCompressor - Class in io.scif.media.imageio.plugins.tiff
-
An abstract superclass for pluggable TIFF compressors.
- TIFFCompressor(String, int, boolean) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
Creates a compressor object for use in compressing TIFF data.
- TIFFDecompressor - Class in io.scif.media.imageio.plugins.tiff
-
A class defining a pluggable TIFF decompressor.
- TIFFDecompressor() - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFDecompressor
-
- TIFFDeflateCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
Compressor for Deflate compression.
- TIFFDeflateCompressor(ImageWriteParam, int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFDeflateCompressor
-
- TIFFDeflateDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFDeflateDecompressor(int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFDeflateDecompressor
-
- TIFFDeflater - Class in io.scif.media.imageioimpl.plugins.tiff
-
Compressor superclass for Deflate and ZLib compression.
- TIFFDeflater(String, int, ImageWriteParam, int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFDeflater
-
- TIFFDirectory - Class in io.scif.media.imageio.plugins.tiff
-
A convenience class for simplifying interaction with TIFF native
image metadata.
- TIFFDirectory(TIFFTagSet[], TIFFTag) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFDirectory
-
Constructs a
TIFFDirectory which is aware of a given
group of TIFFTagSets.
- TIFFElementInfo - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFElementInfo(String[], String[], int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFElementInfo
-
- TIFFEXIFJPEGCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
A
TIFFCompressor for the JPEG variant of EXIF.
- TIFFEXIFJPEGCompressor(ImageWriteParam) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFEXIFJPEGCompressor
-
- TIFFFaxCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFFaxCompressor(String, int, boolean) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Constructor.
- TIFFFaxDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFFaxDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxDecompressor
-
- TIFFField - Class in io.scif.media.imageio.plugins.tiff
-
A class representing a field in a TIFF 6.0 Image File Directory.
- TIFFField(TIFFTag, int, int, Object) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFField
-
Constructs a
TIFFField with arbitrary data.
- TIFFField(TIFFTag, int, int) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFField
-
Constructs a data array using
createArrayForType()TIFFField(TIFFTag,int,int,Object) with the supplied
parameters and the created array.
- TIFFField(TIFFTag, int) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFField
-
Constructs a
TIFFField with a single integral value.
- TIFFFieldNode - Class in io.scif.media.imageioimpl.plugins.tiff
-
The
Node representation of a TIFFField
wherein the child node is procedural rather than buffered.
- TIFFFieldNode(TIFFField) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFFieldNode
-
- TIFFIFD - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFIFD(List, TIFFTag) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFIFD
-
- TIFFIFD(List) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFIFD
-
- TIFFImageMetadata - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageMetadata(List) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageMetadata
-
- TIFFImageMetadata(TIFFIFD) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageMetadata
-
- TIFFImageMetadataFormat - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageMetadataFormatResources - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageMetadataFormatResources() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageMetadataFormatResources
-
- TIFFImageReader - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageReader(ImageReaderSpi) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReader
-
- TIFFImageReaderSpi - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageReaderSpi() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageReaderSpi
-
- TIFFImageReadParam - Class in io.scif.media.imageio.plugins.tiff
-
A subclass of
ImageReadParam allowing control over
the TIFF reading process.
- TIFFImageReadParam() - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFImageReadParam
-
Constructs a
TIFFImageReadParam.
- TIFFImageWriteParam - Class in io.scif.media.imageio.plugins.tiff
-
A subclass of
ImageWriteParam
- TIFFImageWriteParam(Locale) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFImageWriteParam
-
Constructs a
TIFFImageWriteParam instance
for a given Locale.
- TIFFImageWriter - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageWriter(ImageWriterSpi) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- TIFFImageWriterSpi - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFImageWriterSpi() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriterSpi
-
- TIFFJPEGCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
Compressor for encoding compression type 7, TTN2/Adobe JPEG-in-TIFF.
- TIFFJPEGCompressor(ImageWriteParam) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFJPEGCompressor
-
- TIFFJPEGDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFJPEGDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFJPEGDecompressor
-
- TIFFLSBCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
Uncompressed data with LSB-to-MSB fill order.
- TIFFLSBCompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFLSBCompressor
-
- TIFFLSBDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFLSBDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFLSBDecompressor
-
- TIFFLZWCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
LZW Compressor.
- TIFFLZWCompressor(int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWCompressor
-
- TIFFLZWDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFLZWDecompressor(int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWDecompressor
-
- TIFFLZWUtil - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFLZWUtil() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWUtil
-
- TIFFMetadataFormat - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFMetadataFormat() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFMetadataFormat
-
- TIFFNullCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFNullCompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFNullCompressor
-
- TIFFNullDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFNullDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFNullDecompressor
-
- TIFFOldJPEGDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
TIFFDecompressor for "Old JPEG" compression.
- TIFFOldJPEGDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFOldJPEGDecompressor
-
- TIFFOMETranslator() - Constructor for class io.scif.ome.translators.TIFFTranslator.TIFFOMETranslator
-
- TIFFPackBitsCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFPackBitsCompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFPackBitsCompressor
-
- TIFFPackBitsDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFPackBitsDecompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFPackBitsDecompressor
-
- TIFFPackBitsUtil - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFPackBitsUtil() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFPackBitsUtil
-
- TIFFRenderedImage - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFRenderedImage(TIFFImageReader, int, ImageReadParam, int, int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFRenderedImage
-
- TIFFRLECompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFRLECompressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFRLECompressor
-
- TIFFStreamMetadata - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFStreamMetadata() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFStreamMetadata
-
- TIFFStreamMetadataFormat - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFStreamMetadataFormatResources - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFStreamMetadataFormatResources() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFStreamMetadataFormatResources
-
- TIFFT4Compressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFT4Compressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFT4Compressor
-
- TIFFT6Compressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFT6Compressor() - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFT6Compressor
-
- TIFFTag - Class in io.scif.media.imageio.plugins.tiff
-
A class defining the notion of a TIFF tag.
- TIFFTag(String, int, int, TIFFTagSet) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Constructs a
TIFFTag with a given name, tag number, set
of legal data types, and TIFFTagSet to which it refers.
- TIFFTag(String, int, int) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFTag
-
Constructs a
TIFFTag with a given name, tag
number, and set of legal data types.
- TIFFTagSet - Class in io.scif.media.imageio.plugins.tiff
-
A class representing a set of TIFF tags.
- TIFFTagSet(List) - Constructor for class io.scif.media.imageio.plugins.tiff.TIFFTagSet
-
Constructs a
TIFFTagSet, given a List
of TIFFTag objects.
- TIFFTranslator - Class in io.scif.ome.translators
-
Container class for translators between OME and TIFF formats.
- TIFFTranslator() - Constructor for class io.scif.ome.translators.TIFFTranslator
-
- TIFFTranslator.OMETIFFTranslator - Class in io.scif.ome.translators
-
Translator class from
TIFFFormat.Metadata to
OMEMetadata.
- TIFFTranslator.TIFFOMETranslator - Class in io.scif.ome.translators
-
Translator class from
TIFFFormat.Metadata to
OMEMetadata
- TIFFYCbCrColorConverter - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFYCbCrColorConverter(TIFFImageMetadata) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrColorConverter
-
- TIFFYCbCrDecompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
- TIFFYCbCrDecompressor(TIFFDecompressor, boolean) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrDecompressor
-
- TIFFZLibCompressor - Class in io.scif.media.imageioimpl.plugins.tiff
-
Compressor for ZLib compression.
- TIFFZLibCompressor(ImageWriteParam, int) - Constructor for class io.scif.media.imageioimpl.plugins.tiff.TIFFZLibCompressor
-
- tileChanged() - Method in class io.scif.jj2000.j2k.roi.encoder.ROIMaskGenerator
-
This function is called every time the tile is changed to indicate
that there is need to make a new mask
- tileCompVal - Variable in class io.scif.jj2000.j2k.ModuleSpec
-
The specific value for each tile-component.
- tileDef - Variable in class io.scif.jj2000.j2k.ModuleSpec
-
The default value for each tile.
- tileGridXOffset - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The X coordinate of the upper-left pixel of tile (0, 0).
- tileGridYOffset - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The Y coordinate of the upper-left pixel of tile (0, 0).
- tileHeight - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The height of a tile.
- tileMaskMade - Variable in class io.scif.jj2000.j2k.roi.encoder.ROIMaskGenerator
-
Flag indicating whether a mask has been made for the current tile
- tileOfTileParts - Variable in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Vector containing info as to which tile each tilepart belong
- tiler - Variable in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Reference to the tiler module
- Tiler - Class in io.scif.jj2000.j2k.image
-
This class places an image in the canvas coordinate system, tiles it, if so
specified, and performs the coordinate conversions transparently.
- Tiler(BlkImgDataSrc, int, int, int, int, int, int) - Constructor for class io.scif.jj2000.j2k.image.Tiler
-
Constructs a new tiler with the specified 'BlkImgDataSrc' source,
image origin, tiling origin and nominal tile size.
- tileWidth - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The width of a tile.
- tileXToX(int, int, int) - Static method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a horizontal tile index into the X coordinate of its
upper left pixel relative to a given tile grid layout specified
by its X offset and tile width.
- tileXToX(int) - Method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a horizontal tile index into the X coordinate of its
upper left pixel.
- tileYToY(int, int, int) - Static method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a vertical tile index into the Y coordinate of
its upper left pixel relative to a given tile grid layout
specified by its Y offset and tile height.
- tileYToY(int) - Method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a vertical tile index into the Y coordinate of its
upper left pixel.
- time - Variable in class io.scif.lifesci.SDTInfo
-
Time of creation.
- timeBins - Variable in class io.scif.lifesci.SDTInfo
-
- TimePoint - Class in io.scif.formats.imaris
-
- TimePoint(ResolutionLevel[], int[], int, int, int, boolean) - Constructor for class io.scif.formats.imaris.TimePoint
-
- timepoints - Variable in class io.scif.lifesci.SDTInfo
-
- TLM - Static variable in interface io.scif.jj2000.j2k.codestream.Markers
-
Tile-part lengths (TLM): 0xFF55
- tnbytes - Variable in class io.scif.jj2000.j2k.codestream.reader.BitstreamReaderAgent
-
Number of bytes targeted to be read
- tnsot - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SOT
-
- toByteArray(byte[]) - Method in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
Returns the byte buffer data in a new array.
- toByteArray(int, int, byte[], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.ByteOutputBuffer
-
Copies the specified part of the stream to the 'outbuf' byte
array.
- toCIEXYZ(float[]) - Method in class io.scif.media.imageioimpl.common.BogusColorSpace
-
- toCIEXYZ(float[]) - Method in class io.scif.media.imageioimpl.common.InvertedCMYKColorSpace
-
- toCIEXYZ(float[]) - Method in class io.scif.media.imageioimpl.common.SimpleCMYKColorSpace
-
- ToOMETranslator<M extends Metadata> - Class in io.scif.ome.translators
-
Abstract base class for all io.scif.Translators that translate to an
OMEMetadata object.
- ToOMETranslator() - Constructor for class io.scif.ome.translators.ToOMETranslator
-
- toRGB(float, float, float, float[]) - Method in class io.scif.media.imageio.plugins.tiff.TIFFColorConverter
-
Converts a triple in the native color space of this
TIFFColorConverter into an RGB triple, and stores the result in
the first three entries of the
rgb array.
- toRGB(float[]) - Method in class io.scif.media.imageioimpl.common.BogusColorSpace
-
- toRGB(float[]) - Method in class io.scif.media.imageioimpl.common.InvertedCMYKColorSpace
-
- toRGB(float[]) - Method in class io.scif.media.imageioimpl.common.SimpleCMYKColorSpace
-
- toRGB(float, float, float, float[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFCIELabColorConverter
-
- toRGB(float, float, float, float[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFYCbCrColorConverter
-
- toString() - Method in class io.scif.cli.show.AsciiImage
-
- toString() - Method in class io.scif.jj2000.j2k.codestream.CBlkCoordInfo
-
Returns code-block's information in a String
- toString() - Method in class io.scif.jj2000.j2k.codestream.CoordInfo
-
Returns object's information in a String
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.COC
-
Display information found in this COC marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.COD
-
Display information found in this COD marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.COM
-
Display information found in the COM marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.CRG
-
Display information found in the CRG marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.POC
-
Display information found in this POC marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCC
-
Display information found in this QCC marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.QCD
-
Display information found in this QCD marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.RGN
-
Display information found in this RGN marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
Display information found in SIZ marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo.SOT
-
Display information found in this SOT marker segment
- toString() - Method in class io.scif.jj2000.j2k.codestream.PrecCoordInfo
-
Returns precinct's information in a String
- toString() - Method in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Returns PrecInfo object information in a String
- toString() - Method in class io.scif.jj2000.j2k.codestream.reader.CBlkInfo
-
Object information in a string.
- toString() - Method in class io.scif.jj2000.j2k.codestream.reader.HeaderDecoder
-
Print information about the current header.
- toString() - Method in class io.scif.jj2000.j2k.codestream.reader.PktInfo
-
Object information in a string.
- toString() - Method in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
Prints information about this object for debugging purposes
- toString() - Method in class io.scif.jj2000.j2k.entropy.CodedCBlk
-
Returns the contents of the object in a string.
- toString() - Method in class io.scif.jj2000.j2k.entropy.decoder.DecLyrdCBlk
-
Object information in a string
- toString() - Method in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
Returns the contents of the object in a string.
- toString() - Method in class io.scif.jj2000.j2k.entropy.Progression
-
- toString() - Method in class io.scif.jj2000.j2k.image.DataBlk
-
Returns a string of informations about the DataBlk
- toString() - Method in class io.scif.jj2000.j2k.image.DataBlkFloat
-
Returns a string of informations about the DataBlkInt.
- toString() - Method in class io.scif.jj2000.j2k.image.DataBlkInt
-
Returns a string of informations about the DataBlkInt.
- toString() - Method in class io.scif.jj2000.j2k.image.forwcomptransf.ForwCompTransf
-
Returns a string with a descriptive text of which forward component
transformation is used.
- toString() - Method in class io.scif.jj2000.j2k.image.ImgDataJoiner
-
Returns a string of information about the object, more than 1 line
long.
- toString() - Method in class io.scif.jj2000.j2k.image.input.ImgReaderPGM
-
Returns a string of information about the object, more than 1 line
long.
- toString() - Method in class io.scif.jj2000.j2k.image.invcomptransf.InvCompTransf
-
Returns a string with a descriptive text of which inverse component
transformation is used.
- toString() - Method in class io.scif.jj2000.j2k.image.Tiler
-
Returns a String object representing Tiler's informations
- toString() - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Returns a string of information about the file and the endianess
- toString() - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Returns a string of information about the file
- toString() - Method in class io.scif.jj2000.j2k.roi.encoder.ArbROIMaskGenerator
-
This function returns the relevant data of the mask generator
- toString() - Method in class io.scif.jj2000.j2k.roi.encoder.RectROIMaskGenerator
-
This function returns the relevant data of the mask generator
- toString() - Method in class io.scif.jj2000.j2k.roi.encoder.ROI
-
This function prints all relevant data for the ROI
- toString() - Method in class io.scif.jj2000.j2k.wavelet.analysis.AnWTFilterFloatLift9x7
-
Debugging method
- toString() - Method in class io.scif.jj2000.j2k.wavelet.analysis.AnWTFilterIntLift5x3
-
Debugging method
- toString() - Method in class io.scif.jj2000.j2k.wavelet.analysis.AnWTFilterSpec
-
Debugging method
- toString() - Method in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
Returns a string of informations about the DataBlk
- toString() - Method in class io.scif.jj2000.j2k.wavelet.Subband
-
Returns subband informations in a string.
- toString() - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterFloatLift9x7
-
Returns a string of information about the synthesis wavelet filter
- toString() - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterIntLift5x3
-
Returns a string of information about the synthesis wavelet filter
- toString() - Method in class io.scif.jj2000.j2k.wavelet.synthesis.SynWTFilterSpec
-
Debugging method
- toStringMainHeader() - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Display information found in the different marker segments of the main
header
- toStringThNoSOT(int, int) - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Returns information found in the tile-part headers of a given tile
exception the SOT marker segment.
- toStringTileHeader(int, int) - Method in class io.scif.jj2000.j2k.codestream.HeaderInfo
-
Returns information found in the tile-part headers of a given tile.
- tpsot - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SOT
-
- transColor - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- transformToLatestVersion(String) - Method in class io.scif.ome.services.DefaultOMEXMLService
-
- transformToLatestVersion(String) - Method in interface io.scif.ome.services.OMEXMLService
-
- translateFormatMetadata(BioFormatsFormat.Metadata, OMEMetadata) - Method in class io.scif.bf.ome.BioFormatsTranslator.BioFormatsOMETranslator
-
- translateFormatMetadata(APNGFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.APNGTranslator.APNGOMETranslator
-
- translateFormatMetadata(OMEMetadata, APNGFormat.Metadata) - Method in class io.scif.ome.translators.APNGTranslator.OMEAPNGTranslator
-
- translateFormatMetadata(BMPFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.BMPTranslator.BMPOMETranslator
-
- translateFormatMetadata(DICOMFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.DICOMTranslator.DICOMOMETranslator
-
- translateFormatMetadata(OMEMetadata, EPSFormat.Metadata) - Method in class io.scif.ome.translators.EPSTranslator.OMEEPSTranslator
-
- translateFormatMetadata(ICSFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.ICSTranslator.ICSOMETranslator
-
- translateFormatMetadata(OMEMetadata, ICSFormat.Metadata) - Method in class io.scif.ome.translators.ICSTranslator.OMEICSTranslator
-
- translateFormatMetadata(MicromanagerFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.MicromanagerTranslator.MicromanagerOMETranslator
-
- translateFormatMetadata(NRRDFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.NRRDTranslator.NRRDOMETranslator
-
- translateFormatMetadata(OBFFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.OBFTranslator.OBFOMETranslator
-
- translateFormatMetadata(OMEMetadata, TIFFFormat.Metadata) - Method in class io.scif.ome.translators.TIFFTranslator.OMETIFFTranslator
-
- translateFormatMetadata(TIFFFormat.Metadata, OMEMetadata) - Method in class io.scif.ome.translators.TIFFTranslator.TIFFOMETranslator
-
- translateImageMetadata(List<ImageMetadata>, M) - Method in class io.scif.ome.translators.FromOMETranslator
-
- translateImageMetadata(List<ImageMetadata>, OMEMetadata) - Method in class io.scif.ome.translators.ToOMETranslator
-
- transparency - Variable in class io.scif.media.imageioimpl.common.PaletteBuilder
-
- transparentColorFlag - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- transparentColorIndex - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- trate - Variable in class io.scif.jj2000.j2k.codestream.reader.BitstreamReaderAgent
-
Target decoding rate in bpp
- treeS - Variable in class io.scif.jj2000.j2k.codestream.reader.TagTreeDecoder
-
The tag tree state.
- treeS - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The tag tree state.
- treeSbak - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The saved tag tree state.
- treeV - Variable in class io.scif.jj2000.j2k.codestream.reader.TagTreeDecoder
-
The tag tree values.
- treeV - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The tag tree values.
- treeVbak - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The saved tag tree values.
- trigger - Variable in class io.scif.lifesci.SDTInfo
-
- truncDists - Variable in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
The distortion for each truncation point (valid and non-valid ones)
- truncIdxs - Variable in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
The indices of the valid truncation points, in increasing
order.
- truncRates - Variable in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
The rate (in bytes) for each truncation point (valid and non-valid
ones)
- truncSlopes - Variable in class io.scif.jj2000.j2k.entropy.encoder.CBlkRateDistStats
-
The negative of the rate-distortion slope for each valid truncation
point
- tsLengths - Variable in class io.scif.jj2000.j2k.entropy.decoder.DecLyrdCBlk
-
The length of each terminated segment.
- tts - Variable in class io.scif.jj2000.j2k.entropy.encoder.StdEntropyCoder
-
The termination type specifications
- type - Variable in class io.scif.jj2000.j2k.entropy.Progression
-
Progression type as defined in ProgressionType interface
- type - Variable in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
- TYPE_BYTE - Static variable in class io.scif.jj2000.j2k.image.DataBlk
-
The identifier for the byte data type, as signed 8
bits.
- TYPE_FLOAT - Static variable in class io.scif.jj2000.j2k.image.DataBlk
-
The identifier for the float data type
- TYPE_INT - Static variable in class io.scif.jj2000.j2k.image.DataBlk
-
The identifier for the int data type, as signed 32
bits.
- TYPE_SHORT - Static variable in class io.scif.jj2000.j2k.image.DataBlk
-
The identifier for the short data type, as signed 16
bits.
- typedParse(DataHandle<Location>, BioFormatsFormat.Metadata, SCIFIOConfig) - Method in class io.scif.bf.BioFormatsFormat.Parser
-
- typedParse(DataHandle<Location>, SDTFormat.Metadata, SCIFIOConfig) - Method in class io.scif.lifesci.SDTFormat.Parser
-
U
- ulcx - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The horizontal coordinate of the upper-left corner of the subband, with
respect to the canvas origin, in the component's grid and subband's
decomposition level.
- ulcy - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The vertical coordinate of the upper-left corner of the subband, with
respect to the canvas origin, in the component's grid and subband's
decomposition level.
- ulx - Variable in class io.scif.jj2000.j2k.codestream.CoordInfo
-
Horizontal upper left coordinate in the subband
- ulx - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct horizontal upper-left coordinate in the corresponding
resolution level
- ulx - Variable in class io.scif.jj2000.j2k.codestream.reader.CBlkInfo
-
Upper-left x-coordinate of the code-block (relative to the
tile)
- ulx - Variable in class io.scif.jj2000.j2k.entropy.decoder.DecLyrdCBlk
-
The horizontal coordinate of the upper-left corner of the code-block
- ulx - Variable in class io.scif.jj2000.j2k.image.DataBlk
-
The horizontal coordinate (in pixels) of the upper-left corner
of the block of data.
- ulx - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
x coordinate of upper left corner of rectangular ROI
- ulx - Variable in class io.scif.jj2000.j2k.roi.encoder.SubbandROIMask
-
Horizontal uper-left coordinate of the subband mask
- ulx - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The horizontal coordinate of the upper-left corner of the code-block
- ulx - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The horizontal coordinate of the upper-left corner of the subband
- ulxs - Variable in class io.scif.jj2000.j2k.roi.encoder.SubbandRectROIMask
-
The upper left x coordinates of the applicable ROIs
- uly - Variable in class io.scif.jj2000.j2k.codestream.CoordInfo
-
Vertical upper left coordinate in the subband
- uly - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct vertical upper-left coordinate in the corresponding
resolution level
- uly - Variable in class io.scif.jj2000.j2k.codestream.reader.CBlkInfo
-
Upper-left y-coordinate of the code-block (relative to the
tile)
- uly - Variable in class io.scif.jj2000.j2k.entropy.decoder.DecLyrdCBlk
-
The vertical coordinate of the upper left corner of the code-block
- uly - Variable in class io.scif.jj2000.j2k.image.DataBlk
-
The vertical coordinate of the upper-left corner of the block
of data.
- uly - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
y coordinate of upper left corner of rectangular ROI
- uly - Variable in class io.scif.jj2000.j2k.roi.encoder.SubbandROIMask
-
Vertical uper-left coordinate of the subband mask
- uly - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The vertical coordinate of the upper left corner of the code-block
- uly - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The vertical coordinate of the upper-left corner of the subband
- ulys - Variable in class io.scif.jj2000.j2k.roi.encoder.SubbandRectROIMask
-
The upper left y coordinates of the applicable ROIs
- uncompressedMode - Variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxDecompressor
-
Uncompressed mode flag: 1 if uncompressed, 0 if not.
- unsetColorConverter() - Method in class io.scif.media.imageio.plugins.tiff.TIFFImageWriteParam
-
Removes any currently set
ColorConverter object and
PhotometricInterpretation tag value.
- unwrap() - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- update(int, int, int, PktHeaderBitReader) - Method in class io.scif.jj2000.j2k.codestream.reader.TagTreeDecoder
-
Decodes information for the specified element of the tree,
given the threshold, and updates its value.
- updateProgressWatch(int, String) - Method in interface io.scif.jj2000.j2k.util.ProgressWatch
-
Update the progress watching process to the specified value
- URL_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
- useMotor - Variable in class io.scif.lifesci.SDTInfo
-
- userInputFlag - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFImageMetadata
-
- useRoi() - Method in class io.scif.jj2000.j2k.roi.encoder.ROIScaler
-
This function returns the flag indicating if any ROI functionality used
- utrb - Variable in class io.scif.jj2000.j2k.quantization.dequantizer.Dequantizer
-
The "range bits" for each un-transformed component
- UUID_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
- UUID_INFO_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
- UUID_LIST_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
UUID Info Boxes
- UUIDBox - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
This class is defined to represent a UUID Box of JPEG JP2
file format.
- UUIDBox(byte[]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.UUIDBox
-
Constructs a
UUIDBox from its content data array.
- UUIDBox(Node) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.UUIDBox
-
Constructs a
UUIDBox based on the provided
org.w3c.dom.Node.
- UUIDListBox - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
This class is defined to represent a UUID list Box of JPEG JP2
file format.
- UUIDListBox(short, byte[][]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.UUIDListBox
-
Constructs a
UUIDListBox from the provided uuid number
and uuids.
- UUIDListBox(byte[]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.UUIDListBox
-
Constructs a
UUIDListBox from the provided content
data array.
- UUIDListBox(Node) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.UUIDListBox
-
Constructs a
UUIDListBox based on the provided
org.w3c.dom.Node.
V
- validateOMEXML(String) - Method in class io.scif.ome.services.DefaultOMEXMLService
-
- validateOMEXML(String, boolean) - Method in class io.scif.ome.services.DefaultOMEXMLService
-
- validateOMEXML(String) - Method in interface io.scif.ome.services.OMEXMLService
-
- validateOMEXML(String, boolean) - Method in interface io.scif.ome.services.OMEXMLService
-
- validateParams() - Method in class io.scif.cli.AbstractSCIFIOToolCommand
-
Very that all parameters were set correctly, in case any need checking that
the
Parameter or Argument can't provide.
- validateParams() - Method in class io.scif.cli.convert.Convert
-
- validateParams() - Method in class io.scif.cli.help.Help
-
- validateParams() - Method in class io.scif.cli.info.Info
-
- validateParams() - Method in class io.scif.cli.show.Show
-
- validateParams() - Method in class io.scif.ome.commands.OMEXMLToolCommand
-
- verifyMinimumPopulated(MetadataRetrieve) - Method in class io.scif.ome.services.DefaultOMEMetadataService
-
- verifyMinimumPopulated(MetadataRetrieve, int) - Method in class io.scif.ome.services.DefaultOMEMetadataService
-
- verifyMinimumPopulated(MetadataRetrieve) - Method in interface io.scif.ome.services.OMEMetadataService
-
- verifyMinimumPopulated(MetadataRetrieve, int) - Method in interface io.scif.ome.services.OMEMetadataService
-
- version - Static variable in class io.scif.jj2000.j2k.JJ2KInfo
-
The version number (such as 2.0, 2.1.1, etc.)
- version - Variable in class io.scif.media.imageioimpl.plugins.gif.GIFStreamMetadata
-
- VERSION_2 - Static variable in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
Deprecated.
- VERSION_2 - Static variable in interface io.scif.media.imageioimpl.plugins.bmp.BMPConstants
-
- VERSION_2_5 - Static variable in interface io.scif.media.imageioimpl.plugins.pcx.PCXConstants
-
- VERSION_2_8_W_PALETTE - Static variable in interface io.scif.media.imageioimpl.plugins.pcx.PCXConstants
-
- VERSION_2_8_WO_PALETTE - Static variable in interface io.scif.media.imageioimpl.plugins.pcx.PCXConstants
-
- VERSION_3 - Static variable in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
Deprecated.
- VERSION_3 - Static variable in interface io.scif.media.imageioimpl.plugins.bmp.BMPConstants
-
- VERSION_3_0 - Static variable in interface io.scif.media.imageioimpl.plugins.pcx.PCXConstants
-
- VERSION_3_NT - Static variable in interface io.scif.media.imageioimpl.plugins.bmp.BMPConstants
-
- VERSION_4 - Static variable in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
Deprecated.
- VERSION_4 - Static variable in interface io.scif.media.imageioimpl.plugins.bmp.BMPConstants
-
- VERSION_5 - Static variable in class io.scif.media.imageio.plugins.bmp.BMPImageWriteParam
-
Deprecated.
- VERSION_5 - Static variable in interface io.scif.media.imageioimpl.plugins.bmp.BMPConstants
-
- VERSION_PC_WINDOWS - Static variable in interface io.scif.media.imageioimpl.plugins.pcx.PCXConstants
-
- versionStrings - Static variable in class io.scif.media.imageioimpl.plugins.gif.GIFStreamMetadata
-
- vert - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Black and white vertical mode table.
- vertMode - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
Vertical mode table.
- vFilter - Variable in class io.scif.jj2000.j2k.wavelet.analysis.SubbandAn
-
The vertical analysis filter used to decompose this
subband.
- vFilter - Variable in class io.scif.jj2000.j2k.wavelet.synthesis.SubbandSyn
-
The vertical analysis filter used to decompose this subband,
from its childs.
W
- w - Variable in class io.scif.jj2000.j2k.codestream.CoordInfo
-
Object's width
- w - Variable in class io.scif.jj2000.j2k.codestream.PrecInfo
-
Precinct width in the corresponding resolution level
- w - Variable in class io.scif.jj2000.j2k.codestream.reader.CBlkInfo
-
Width of the code-block
- w - Variable in class io.scif.jj2000.j2k.codestream.reader.TagTreeDecoder
-
The horizontal dimension of the base level
- w - Variable in class io.scif.jj2000.j2k.codestream.writer.TagTreeEncoder
-
The horizontal dimension of the base level
- w - Variable in class io.scif.jj2000.j2k.entropy.decoder.DecLyrdCBlk
-
The width of the code-block
- w - Variable in class io.scif.jj2000.j2k.image.DataBlk
-
The width of the block, in pixels.
- w - Variable in class io.scif.jj2000.j2k.image.input.ImgReader
-
The width of the image
- w - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
width of rectangular ROI
- w - Variable in class io.scif.jj2000.j2k.roi.encoder.SubbandROIMask
-
Width of the subband mask
- w - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The width of the code-block
- w - Variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The width of the subband
- W5X3 - Static variable in interface io.scif.jj2000.j2k.wavelet.FilterTypes
-
W5x3 filter: 0x01
- W9X7 - Static variable in interface io.scif.jj2000.j2k.wavelet.FilterTypes
-
W7x9 filter: 0x00
- warn(String) - Method in class io.scif.cli.AbstractSCIFIOToolCommand
-
- WARNING - Static variable in interface io.scif.jj2000.j2k.util.MsgLogger
-
Severity of message.
- WaveletFilter - Interface in io.scif.jj2000.j2k.wavelet
-
This interface defines how a wavelet filter implementation should
present itself.
- WaveletTransform - Interface in io.scif.jj2000.j2k.wavelet
-
This interface defines how a forward or inverse wavelet transform
should present itself.
- WBMPImageReader - Class in io.scif.media.imageioimpl.plugins.wbmp
-
This class is the Java Image IO plugin reader for WBMP images.
- WBMPImageReader(ImageReaderSpi) - Constructor for class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReader
-
Constructs
WBMPImageReader from the provided
ImageReaderSpi.
- WBMPImageReaderSpi - Class in io.scif.media.imageioimpl.plugins.wbmp
-
- WBMPImageReaderSpi() - Constructor for class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageReaderSpi
-
- WBMPImageWriter - Class in io.scif.media.imageioimpl.plugins.wbmp
-
The Java Image IO plugin writer for encoding a binary RenderedImage into
a WBMP format.
- WBMPImageWriter(ImageWriterSpi) - Constructor for class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageWriter
-
Constructs
WBMPImageWriter based on the provided
ImageWriterSpi.
- WBMPImageWriterSpi - Class in io.scif.media.imageioimpl.plugins.wbmp
-
- WBMPImageWriterSpi() - Constructor for class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageWriterSpi
-
- WBMPMetadata - Class in io.scif.media.imageioimpl.plugins.wbmp
-
- WBMPMetadata() - Constructor for class io.scif.media.imageioimpl.plugins.wbmp.WBMPMetadata
-
- wbmpType - Variable in class io.scif.media.imageioimpl.plugins.wbmp.WBMPMetadata
-
- wfs - Variable in class io.scif.jj2000.j2k.decoder.DecoderSpecs
-
Analysis wavelet filters specifications
- WHITE - Static variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFFaxCompressor
-
The CCITT numerical definition of white.
- WHITE_BALANCE_AUTO - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "WhiteBalance" tag.
- WHITE_BALANCE_MANUAL - Static variable in class io.scif.media.imageio.plugins.tiff.EXIFTIFFTagSet
-
A value to be used with the "WhiteBalance" tag.
- width - Variable in class io.scif.lifesci.SDTInfo
-
- width - Variable in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
The image's width in pixels.
- width - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- width - Variable in class io.scif.media.imageioimpl.plugins.wbmp.WBMPMetadata
-
- wmseScaling - Variable in class io.scif.jj2000.j2k.wavelet.analysis.CBlkWTData
-
The WMSE scaling factor (multiplicative) to apply to the distortion
measures of the data of this code-block.
- wp - Variable in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
The encoder specifications
- wp - Variable in class io.scif.jj2000.j2k.entropy.encoder.PostCompRateAllocator
-
The source of entropy coded data
- write(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- write(byte[]) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- write(byte[], int, int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- write(ByteBuffer) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- write(ByteBuffer, int, int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- write(int) - Method in class io.scif.jj2000.j2k.entropy.encoder.ByteOutputBuffer
-
Writes the specified byte to this byte array output stream.
- write(int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Writes a byte to the stream.
- write(byte) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Writes a byte to the stream.
- write(byte[], int, int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Writes aan array of bytes to the stream.
- write(int) - Method in interface io.scif.jj2000.j2k.io.RandomAccessIO
-
Writes a byte to the stream.
- write(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- write(int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- write(byte[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageWriter
-
- write(byte[]) - Method in class io.scif.media.imageioimpl.plugins.clib.OutputStreamAdapter
-
- write(byte[], int, int) - Method in class io.scif.media.imageioimpl.plugins.clib.OutputStreamAdapter
-
- write(int) - Method in class io.scif.media.imageioimpl.plugins.clib.OutputStreamAdapter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageWriter
-
- write(ImageOutputStream) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.Box
-
Writes this box instance into a
ImageOutputStream.
- write(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.pcx.PCXImageWriter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.pnm.PNMImageWriter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.raw.RawImageWriter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- write(IIOMetadata, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.wbmp.WBMPImageWriter
-
- WRITE_ABORTED - Static variable in class io.scif.media.imageioimpl.plugins.jpeg2000.J2KImageWriter
-
When the writing is aborted,
RenderedImageSrc throws a
RuntimeException.
- writeAbbreviatedStream - Variable in class io.scif.media.imageioimpl.plugins.tiff.TIFFBaseJPEGCompressor
-
Whether to write abbreviated JPEG streams (default == false).
- writeBit(int) - Method in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
Writes a bit to the buffer at the current position.
- writeBits(int, int) - Method in class io.scif.jj2000.j2k.codestream.writer.BitOutputBuffer
-
Writes the n least significant bits of 'bits' to the buffer at the
current position.
- writeBits(int, int) - Method in class io.scif.media.imageioimpl.common.BitFile
-
- writeBoolean(boolean) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeByte(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeByte(int) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the byte value of v (i.e., 8 least
significant bits) to the output.
- writeByte(int) - Method in class io.scif.jj2000.j2k.io.BufferedRandomAccessFile
-
Writes the byte value of v (i.e., 8 least
significant bits) to the output.
- writeByte(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeByte(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeBytes(String) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeChar(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeChars(String) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeChars(char[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeCOC(boolean, int, int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes COC marker segment .
- writeCOD(boolean, int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes COD marker segment.
- writeCompPosResLy(int, int, int, int, int, int[][], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Write a piece of bit stream according to the
COMP_POS_RES_LY_PROG progression mode and between given bounds
- writeContiguousCodeStreamBox() - Method in class io.scif.jj2000.j2k.fileformat.writer.FileFormatWriter
-
This method writes the Contiguous codestream box
- writeDouble(double) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeDouble(double) - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Writes the IEEE double value v (i.e., 64 bits) to the
output.
- writeDouble(double) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the IEEE double value v (i.e., 64 bits)
to the output.
- writeDouble(double) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeDouble(double) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeDoubles(double[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeFileFormat() - Method in class io.scif.jj2000.j2k.fileformat.writer.FileFormatWriter
-
This method reads the codestream and writes the file format wrapper and
the codestream to the same file
- writeFloat(float) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeFloat(float) - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Writes the IEEE float value v (i.e., 32 bits) to the
output.
- writeFloat(float) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the IEEE float value v (i.e., 32 bits) to
the output.
- writeFloat(float) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeFloat(float) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeFloats(float[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeImage(PipelineImage) - Method in class io.scif.formats.imaris.HDFWriter
-
- writeInsert(int, IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- writeInt(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeInt(int) - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Writes the int value of v (i.e., the 32 bits) to the
output.
- writeInt(int) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the int value of v (i.e., the 32 bits) to
the output.
- writeInt(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeInt(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeInts(int[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeLong(long) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeLong(long) - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Writes the long value of v (i.e., the 64 bits) to the
output.
- writeLong(long) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the long value of v (i.e., the 64 bits)
to the output.
- writeLong(long) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeLong(long) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeLongs(long[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeLyResCompPos(int, int, int, int, int, int[][], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Write a piece of bit stream according to the
LY_RES_COMP_POS_PROG progression mode and between given bounds
- writeMainQCC(int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes QCC marker segment in main header.
- writeMainQCD() - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes QCD marker segment in main header.
- writeMaskToPalette(int, int, byte[], byte[], byte[], byte[]) - Method in class io.scif.media.imageioimpl.plugins.bmp.BMPImageWriter
-
- writePacketBody(byte[], int, boolean, boolean, int) - Method in class io.scif.jj2000.j2k.codestream.writer.CodestreamWriter
-
Writes a packet body to the bit stream and returns the number of bytes
used by this body .If in simulation mode then no data is written to the
bit stream but the number of bytes is calculated.
- writePacketBody(byte[], int, boolean, boolean, int) - Method in class io.scif.jj2000.j2k.codestream.writer.FileCodestreamWriter
-
Writes a packet body to the bit stream and returns the number of bytes
used by this body .If in simulation mode then no data is written to the
bit stream but the number of bytes is calculated.
- writePacketHead(byte[], int, boolean, boolean, boolean) - Method in class io.scif.jj2000.j2k.codestream.writer.CodestreamWriter
-
Writes a packet head to the bit stream and returns the number of bytes
used by this header.
- writePacketHead(byte[], int, boolean, boolean, boolean) - Method in class io.scif.jj2000.j2k.codestream.writer.FileCodestreamWriter
-
Writes a packet head to the bit stream and returns the number of bytes
used by this header.
- writePixels(PipelineImage) - Method in class io.scif.formats.imaris.TimePoint
-
- writePlane(int, long, Plane, Interval) - Method in class io.scif.formats.ImarisFormat.Writer
-
- writePOC(boolean, int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes POC marker segment.
- writePosCompResLy(int, int, int, int, int, int[][], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Write a piece of bit stream according to the
COMP_POS_RES_LY_PROG progression mode and between given bounds
- Writer() - Constructor for class io.scif.formats.ImarisFormat.Writer
-
- writer - Variable in class io.scif.media.imageio.plugins.tiff.TIFFCompressor
-
The
ImageWriter calling this
TIFFCompressor.
- writeResLyCompPos(int, int, int, int, int, int[][], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Write a piece of bit stream according to the
RES_LY_COMP_POS_PROG progression mode and between given bounds
- writeResPosCompLy(int, int, int, int, int, int[][], int) - Method in class io.scif.jj2000.j2k.entropy.encoder.EBCOTRateAllocator
-
Write a piece of bit stream according to the
RES_POS_COMP_LY_PROG progression mode and between given bounds
- writeShort(int) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- writeShort(int) - Method in class io.scif.jj2000.j2k.io.BEBufferedRandomAccessFile
-
Writes the short value of v (i.e., 16 least significant bits)
to the output.
- writeShort(int) - Method in interface io.scif.jj2000.j2k.io.BinaryDataOutput
-
Should write the short value of v (i.e., 16 least
significant bits) to the output.
- writeShort(int) - Method in class io.scif.jj2000.j2k.util.ISRandomAccessIO
-
Throws an IOException since this class does not implement data output.
- writeShort(int) - Method in class io.scif.media.imageioimpl.plugins.jpeg2000.IISRandomAccessIO
-
Throws an
IOException as writing is not supported.
- writeShorts(short[], int, int) - Method in class io.scif.media.imageio.stream.FileChannelImageOutputStream
-
- writeString(byte[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWDecompressor
-
Write out the string just uncompressed.
- writeString(byte[]) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFLZWUtil
-
Write out the string just uncompressed.
- writeStringAttribute(int, String, String) - Static method in class io.scif.formats.imaris.HDFUtils
-
- writeTileQCC(int, int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes QCC marker segment in tile header.
- writeTileQCD(int) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes QCD marker segment in tile header.
- writeTo(BinaryDataOutput) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes the header to the specified BinaryDataOutput.
- writeTo(OutputStream) - Method in class io.scif.jj2000.j2k.codestream.writer.HeaderEncoder
-
Writes the header to the specified OutputStream.
- writeToSequence(IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.gif.GIFImageWriter
-
- writeToSequence(IIOImage, ImageWriteParam) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
- writeToStream(ImageOutputStream) - Method in class io.scif.media.imageioimpl.plugins.tiff.TIFFIFD
-
- writeUTF(String) - Method in class io.scif.bf.wrapper.DataHandleAdapter
-
- WT_DECOMP_DYADIC - Static variable in class io.scif.jj2000.j2k.wavelet.analysis.ForwardWT
-
ID for the dyadic wavelet tree decomposition (also called "Mallat" in
JPEG 2000): 0x00.
- WT_DECOMP_DYADIC - Static variable in class io.scif.jj2000.j2k.wavelet.WTDecompSpec
-
ID for the dyadic wavelet tree decomposition (also called
"Mallat" in JPEG 2000): 0x00.
- WT_DECOMP_PACKET - Static variable in class io.scif.jj2000.j2k.wavelet.WTDecompSpec
-
ID for the PACKET (as defined in JPEG 2000) wavelet tree
decomposition (2 levels of decomposition in the high bands and
some specified number for the lowest LL band): 0x01.
- WT_DECOMP_SPACL - Static variable in class io.scif.jj2000.j2k.wavelet.WTDecompSpec
-
ID for the SPACL (as defined in JPEG 2000) wavelet tree
decomposition (1 level of decomposition in the high bands and
some specified number for the lowest LL band): 0x02.
- WT_FILTER_FLOAT_CONVOL - Static variable in interface io.scif.jj2000.j2k.wavelet.WaveletFilter
-
The ID for floatring-poitn convolution implementations
- WT_FILTER_FLOAT_LIFT - Static variable in interface io.scif.jj2000.j2k.wavelet.WaveletFilter
-
The ID for floating-point lifting spteps implementations
- WT_FILTER_INT_LIFT - Static variable in interface io.scif.jj2000.j2k.wavelet.WaveletFilter
-
The ID for integer lifting spteps implementations
- WT_IMPL_FULL - Static variable in interface io.scif.jj2000.j2k.wavelet.WaveletTransform
-
ID for full-page based implementations of wavelet transforms.
- WT_IMPL_LINE - Static variable in interface io.scif.jj2000.j2k.wavelet.WaveletTransform
-
ID for line based implementations of wavelet transforms.
- WT_ORIENT_HH - Static variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The ID for the HH orientation
- WT_ORIENT_HL - Static variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The ID for the HL (horizontal high-pass) orientation
- WT_ORIENT_LH - Static variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The ID for the LH (vertical high-pass) orientation
- WT_ORIENT_LL - Static variable in class io.scif.jj2000.j2k.wavelet.Subband
-
The ID for the LL orientation
- WTDecompSpec - Class in io.scif.jj2000.j2k.wavelet
-
This class holds the decomposition type to be used in each part of the
image; the default one, the component specific ones, the tile default ones
and the component-tile specific ones.
- WTDecompSpec(int, int, int) - Constructor for class io.scif.jj2000.j2k.wavelet.WTDecompSpec
-
Constructs a new 'WTDecompSpec' for the specified number of components
and tiles, with the given main default decomposition type and number of
levels.
- WTFilterSpec - Class in io.scif.jj2000.j2k.wavelet
-
This is the generic class from which the ones that hold the analysis or
synthesis filters to be used in each part of the image derive.
- WTFilterSpec(int) - Constructor for class io.scif.jj2000.j2k.wavelet.WTFilterSpec
-
Constructs a 'WTFilterSpec' object, initializing all the components and
tiles to the 'FILTER_SPEC_MAIN_DEF' spec type, for the specified number
of components and tiles.
X
- x - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
x coordinate of center of circular ROI
- x0siz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- X_STRING - Static variable in class io.scif.lifesci.SDTInfo
-
- xAxis - Variable in class io.scif.lifesci.SDTInfo
-
X axis representation (SPC-930).
- xcrg - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.CRG
-
- XML_BOX - Static variable in interface io.scif.jj2000.j2k.fileformat.FileFormatBoxes
-
- XMLBox - Class in io.scif.media.imageioimpl.plugins.jpeg2000
-
This class is defined to represent a XML box of JPEG JP2
file format.
- XMLBox(byte[]) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.XMLBox
-
Create a Box from its content.
- XMLBox(Node) - Constructor for class io.scif.media.imageioimpl.plugins.jpeg2000.XMLBox
-
Constructs a
UUIDListBox based on the provided
org.w3c.dom.Node.
- xPixelsPerMeter - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- xref - Variable in class io.scif.jj2000.j2k.codestream.PrecCoordInfo
-
Horizontal upper left coordinate in the reference grid
- xrsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- xsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- xt0siz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- XToTileX(int, int, int) - Static method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a pixel's X coordinate into a horizontal tile index
relative to a given tile grid layout specified by its X offset
and tile width.
- XToTileX(int) - Method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a pixel's X coordinate into a horizontal tile index.
- XToTileX(int, int, int) - Static method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
Converts a pixel's X coordinate into a horizontal tile index
relative to a given tile grid layout specified by its X offset
and tile width.
- xtsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- xyGain - Variable in class io.scif.lifesci.SDTInfo
-
Gain for XY ADCs (SPC930).
Y
- y - Variable in class io.scif.jj2000.j2k.roi.encoder.ROI
-
y coordinate of center of circular ROI
- y0siz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- Y_CB_CR_POSITIONING_CENTERED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "YCbCrPositioning" tag.
- Y_CB_CR_POSITIONING_COSITED - Static variable in class io.scif.media.imageio.plugins.tiff.BaselineTIFFTagSet
-
A value to be used with the "YCbCrPositioning" tag.
- Y_STRING - Static variable in class io.scif.lifesci.SDTInfo
-
- ycrg - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.CRG
-
- yPixelsPerMeter - Variable in class io.scif.media.imageioimpl.plugins.bmp.BMPMetadata
-
- yref - Variable in class io.scif.jj2000.j2k.codestream.PrecCoordInfo
-
Vertical upper left coordinate on the reference grid
- yrsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- ysiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- yt0siz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
- YToTileY(int, int, int) - Static method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a pixel's Y coordinate into a vertical tile index
relative to a given tile grid layout specified by its Y offset
and tile height.
- YToTileY(int) - Method in class io.scif.media.imageioimpl.common.SimpleRenderedImage
-
Converts a pixel's Y coordinate into a vertical tile index.
- YToTileY(int, int, int) - Static method in class io.scif.media.imageioimpl.plugins.tiff.TIFFImageWriter
-
Converts a pixel's Y coordinate into a vertical tile index
relative to a given tile grid layout specified by its Y offset
and tile height.
- ytsiz - Variable in class io.scif.jj2000.j2k.codestream.HeaderInfo.SIZ
-
Z
- zctToArray(String, int, int, int) - Method in class io.scif.ome.services.DefaultOMEMetadataService
-
- zctToArray(String, int, int, int) - Method in interface io.scif.ome.services.OMEMetadataService
-
Given a String dimension order, places the given z, c and t indices in the
correct relative positions in a long array, which is returned.
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