| Package | Description |
|---|---|
| <Unnamed> | |
| mpicbg.ij | |
| mpicbg.models | |
| mpicbg.trakem2.align | |
| mpicbg.trakem2.transform | |
| org.janelia.intensity |
| Modifier and Type | Field and Description |
|---|---|
protected AffineModel2D |
Transform_Affine.model |
| Modifier and Type | Field and Description |
|---|---|
protected InterpolatedAffineModel2D<AffineModel2D,RigidModel2D> |
Transform_RegularizedAffine.model |
| Modifier and Type | Method and Description |
|---|---|
protected AffineModel2D |
Transform_Affine.myModel() |
| Modifier and Type | Method and Description |
|---|---|
protected InterpolatedAffineModel2D<AffineModel2D,RigidModel2D> |
Transform_RegularizedAffine.myModel() |
| Modifier and Type | Method and Description |
|---|---|
protected static void |
TransformMeshMapping.mapTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target) |
protected static void |
TransformMeshMapping.mapTriangleInterpolated(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target) |
protected static void |
TransformMeshMapping.mapTriangleInverse(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target) |
protected static void |
TransformMeshMapping.mapTriangleInverseInterpolated(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target) |
| Modifier and Type | Field and Description |
|---|---|
protected AffineModel2D |
InterpolatedAffineModel2D.affine |
| Modifier and Type | Field and Description |
|---|---|
protected HashMap<AffineModel2D,Vertex> |
SpringMesh.apv |
protected HashMap<AffineModel2D,ArrayList<PointMatch>> |
TransformMesh.av |
protected HashMap<Vertex,AffineModel2D> |
SpringMesh.pva |
protected HashMap<PointMatch,ArrayList<AffineModel2D>> |
TransformMesh.va |
| Modifier and Type | Method and Description |
|---|---|
AffineModel2D |
AffineModel2D.copy() |
AffineModel2D |
InterpolatedAffineModel2D.createAffineModel2D() |
AffineModel2D |
AffineModel2D.createInverse()
TODO Not yet tested
|
| Modifier and Type | Method and Description |
|---|---|
HashMap<AffineModel2D,ArrayList<PointMatch>> |
TransformMesh.getAV() |
HashMap<PointMatch,ArrayList<AffineModel2D>> |
TransformMesh.getVA() |
| Modifier and Type | Method and Description |
|---|---|
void |
InterpolatedAffineModel2D.concatenate(AffineModel2D affine2d) |
void |
AffineModel2D.concatenate(AffineModel2D model) |
protected void |
TransformMesh.illustrateTriangle(AffineModel2D ai,
GeneralPath path) |
void |
InterpolatedAffineModel2D.preConcatenate(AffineModel2D affine2d) |
void |
AffineModel2D.preConcatenate(AffineModel2D model) |
void |
AffineModel2D.set(AffineModel2D m) |
| Constructor and Description |
|---|
AffineTile2D(AffineModel2D model,
Patch patch) |
| Modifier and Type | Class and Description |
|---|---|
class |
AffineModel2D |
| Modifier and Type | Method and Description |
|---|---|
AffineModel2D |
TransformMesh.closestSourceAffine(double[] location)
Return the
AffineModel2D used by the triangle enclosing or
closest to the passed target location. |
AffineModel2D |
TransformMesh.closestTargetAffine(double[] location)
Return the
AffineModel2D used by the triangle enclosing or
closest to the passed target location. |
| Modifier and Type | Method and Description |
|---|---|
protected static void |
TransformMeshMappingWithMasks.mapByteAlphaTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ByteProcessor source,
ij.process.ByteProcessor alpha,
ij.process.ByteProcessor target,
ij.process.ByteProcessor targetMask) |
protected static void |
TransformMeshMappingWithMasks.mapColorAlphaTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ColorProcessor source,
ij.process.ByteProcessor alpha,
ij.process.ColorProcessor target,
ij.process.ByteProcessor targetMask)
Mapping for color images with alpha composition.
|
protected static void |
TransformMeshMappingWithMasks.mapShortAlphaTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ShortProcessor source,
ij.process.ByteProcessor alpha,
ij.process.ShortProcessor target) |
protected static void |
TransformMeshMappingWithMasks.mapTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target,
ij.process.ByteProcessor targetOutside) |
protected static void |
TransformMeshMappingWithMasks.mapTriangle(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor sourceMask,
ij.process.ImageProcessor target,
ij.process.ImageProcessor targetMask,
ij.process.ByteProcessor targetOutside) |
protected static void |
TransformMeshMappingWithMasks.mapTriangleInterpolated(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor target,
ij.process.ByteProcessor targetOutside) |
protected static void |
TransformMeshMappingWithMasks.mapTriangleInterpolated(TransformMesh m,
AffineModel2D ai,
ij.process.ImageProcessor source,
ij.process.ImageProcessor sourceMask,
ij.process.ImageProcessor target,
ij.process.ImageProcessor targetMask,
ij.process.ByteProcessor targetOutside)
Does not do alpha composition.
|
| Modifier and Type | Method and Description |
|---|---|
protected static AffineModel2D |
Render.createScaleLevelTransform(int scaleLevel)
Create an affine transformation that compensates for both scale and
pixel shift of a mipmap level that was generated by top-left pixel
averaging.
|
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