Uses of Package mpicbg.spim.data.sequence (Fiji Javadocs 0-SNAPSHOT API)

Packages that use mpicbg.spim.data.sequence
Package	Description
bdv
bdv.ij.export
bdv.ij.export.imgloader
bdv.ij.export.tiles
bdv.img
bdv.img.hdf5
bdv.img.n5
bdv.spimdata
bdv.spimdata.legacy
bdv.tools.crop
bdv.tools.transformation
bdv.util
bdv.viewer
bdv.viewer.overlay
bigwarp.source
mpicbg.spim.data
mpicbg.spim.data.generic.sequence
mpicbg.spim.data.legacy
mpicbg.spim.data.registration
mpicbg.spim.data.sequence
spim.fiji.datasetmanager
spim.fiji.plugin
spim.fiji.plugin.apply
spim.fiji.plugin.fusion
spim.fiji.plugin.interestpointdetection
spim.fiji.plugin.interestpointregistration
spim.fiji.plugin.queryXML
spim.fiji.plugin.removedetections
spim.fiji.plugin.resave
spim.fiji.plugin.thinout
spim.fiji.plugin.util
spim.fiji.spimdata
spim.fiji.spimdata.explorer
spim.fiji.spimdata.explorer.interestpoint
spim.fiji.spimdata.imgloaders
spim.fiji.spimdata.interestpoints
spim.process.fusion
spim.process.fusion.boundingbox
spim.process.fusion.boundingbox.automatic
spim.process.fusion.deconvolution
spim.process.fusion.export
spim.process.fusion.weightedavg
spim.process.interestpointregistration
spim.process.interestpointregistration.centerofmass
spim.process.interestpointregistration.geometricdescriptor
spim.process.interestpointregistration.geometrichashing
spim.process.interestpointregistration.icp
spim.process.interestpointregistration.optimizationtypes
spim.process.interestpointregistration.registrationstatistics

Classes in mpicbg.spim.data.sequence used by bdv
Class and Description
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.ij.export
Class and Description
TimePoints
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by bdv.ij.export.imgloader
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.ij.export.tiles
Class and Description
TimePoints
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by bdv.img
Class and Description

VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.img
Class and Description
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.img.hdf5
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
MultiResolutionImgLoader An `ImgLoader` providing multiple resolutions of each image.
MultiResolutionSetupImgLoader A `SetupImgLoader` providing multiple resolutions of each image.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.img.n5
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
MultiResolutionImgLoader An `ImgLoader` providing multiple resolutions of each image.
MultiResolutionSetupImgLoader A `SetupImgLoader` providing multiple resolutions of each image.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.spimdata
Class and Description

MissingViews

TimePoints

Classes in mpicbg.spim.data.sequence used by bdv.spimdata.legacy
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.tools.crop
Class and Description

ViewId
Identifies a particular view as a combination of a TimePoint id and a ViewSetup id.
Classes in mpicbg.spim.data.sequence used by bdv.tools.transformation
Class and Description

VoxelDimensions
Classes in mpicbg.spim.data.sequence used by bdv.util
Class and Description

VoxelDimensions
Classes in mpicbg.spim.data.sequence used by bdv.viewer
Class and Description

VoxelDimensions
Classes in mpicbg.spim.data.sequence used by bdv.viewer.overlay
Class and Description

TimePoint
Classes in mpicbg.spim.data.sequence used by bigwarp.source
Class and Description

VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.tools.transformation
Class and Description
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.util
Class and Description
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bdv.viewer
Class and Description
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by bigwarp.source
Class and Description
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by mpicbg.spim.data
Class and Description
SequenceDescription
TimePoints
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by mpicbg.spim.data.generic.sequence
Class and Description
MissingViews
TimePoint
TimePoints
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions
XmlIoMissingViews
XmlIoTimePoints

Classes in mpicbg.spim.data.sequence used by mpicbg.spim.data.legacy
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by mpicbg.spim.data.registration
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewIdUtils

Classes in mpicbg.spim.data.sequence used by mpicbg.spim.data.sequence
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
MissingViews
MultiResolutionSetupImgLoader A `SetupImgLoader` providing multiple resolutions of each image.
SetupImgLoader A `BasicSetupImgLoader` that is able to also provide each image converted to `FloatType`.
Tile Defines a tile that is part of the ViewSetup.
TimePoint
TimePoints
TimePointsPattern
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by spim.fiji.datasetmanager
Class and Description
MissingViews
SequenceDescription
TimePoints
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
SequenceDescription
TimePoint
TimePoints
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.apply
Class and Description

Angle
Defines an angle which is part of the ViewSetup.

ViewDescription

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.fusion
Class and Description
Channel Defines a channel which is part of the ViewSetup.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.interestpointdetection
Class and Description
Channel Defines a channel which is part of the ViewSetup.
TimePoint
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.interestpointregistration
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.queryXML
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
TimePoint

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.removedetections
Class and Description
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.resave
Class and Description
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.thinout
Class and Description

Channel
Defines a channel which is part of the ViewSetup.
Classes in mpicbg.spim.data.sequence used by spim.fiji.plugin.util
Class and Description

ViewId
Identifies a particular view as a combination of a TimePoint id and a ViewSetup id.

Classes in mpicbg.spim.data.sequence used by spim.fiji.spimdata
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
SequenceDescription
TimePoint
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by spim.fiji.spimdata.explorer
Class and Description
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.fiji.spimdata.explorer.interestpoint
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.fiji.spimdata.imgloaders
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).
VoxelDimensions

Classes in mpicbg.spim.data.sequence used by spim.fiji.spimdata.interestpoints
Class and Description
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.fusion
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
TimePoint
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.fusion.boundingbox
Class and Description
Channel Defines a channel which is part of the ViewSetup.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.fusion.boundingbox.automatic
Class and Description
Channel Defines a channel which is part of the ViewSetup.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.fusion.deconvolution
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
TimePoint
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.process.fusion.export
Class and Description
Angle Defines an angle which is part of the ViewSetup.
Channel Defines a channel which is part of the ViewSetup.
Illumination Defines an illumination direction which is part of the ViewSetup.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.process.fusion.weightedavg
Class and Description
Channel Defines a channel which is part of the ViewSetup.
ImgLoader A `BasicImgLoader` that is able to also provide each image converted to `FloatType`.
TimePoint
ViewDescription
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.
ViewSetup A collection of parameters describing the setup for a particular stack coming from a SPIM microscope (angle, illumination direction, etc).

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration
Class and Description
Channel Defines a channel which is part of the ViewSetup.
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.centerofmass
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.geometricdescriptor
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.geometrichashing
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.icp
Class and Description
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.optimizationtypes
Class and Description
Channel Defines a channel which is part of the ViewSetup.
TimePoint
ViewId Identifies a particular view as a combination of a `TimePoint` id and a `ViewSetup` id.

Classes in mpicbg.spim.data.sequence used by spim.process.interestpointregistration.registrationstatistics
Class and Description

TimePoints

Uses of Packagempicbg.spim.data.sequence

Uses of Package
mpicbg.spim.data.sequence