Package | Description |
---|---|
bdv | |
bdv.gui | |
bdv.ij | |
bdv.tools.brightness | |
bdv.ui.sourcetable | |
bdv.util | |
bdv.viewer | |
bigwarp | |
bigwarp.loader | |
spim.fiji.spimdata.explorer |
Modifier and Type | Method and Description |
---|---|
static ConverterSetup |
BigDataViewer.createConverterSetup(SourceAndConverter<?> soc,
int setupId)
Create a
ConverterSetup for the given SourceAndConverter . |
Modifier and Type | Method and Description |
---|---|
static void |
BigDataViewer.initSetups(AbstractSpimData<?> spimData,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<?>> sources) |
static BigDataViewer |
BigDataViewer.open(ArrayList<ConverterSetup> converterSetups,
ArrayList<SourceAndConverter<?>> sources,
int numTimepoints,
CacheControl cache,
String windowTitle,
ProgressWriter progressWriter,
ViewerOptions options) |
Constructor and Description |
---|
BigDataViewer(ArrayList<ConverterSetup> converterSetups,
ArrayList<SourceAndConverter<?>> sources,
AbstractSpimData<?> spimData,
int numTimepoints,
CacheControl cache,
String windowTitle,
ProgressWriter progressWriter,
ViewerOptions options) |
Constructor and Description |
---|
BigWarpViewerFrame(BigWarp<?> bw,
int width,
int height,
List<SourceAndConverter<?>> sources,
List<ConverterSetup> converterSetups,
BigWarpViewerSettings viewerSettings,
CacheControl cache,
BigWarpViewerOptions optional,
String title,
boolean isMoving,
int[] movingIndexList,
int[] targetIndexList) |
BigWarpViewerFrame(BigWarp<?> bw,
int width,
int height,
List<SourceAndConverter<?>> sources,
List<ConverterSetup> converterSetups,
BigWarpViewerSettings viewerSettings,
CacheControl cache,
String title,
boolean isMoving,
int[] movingIndexList,
int[] targetIndexList) |
Modifier and Type | Method and Description |
---|---|
protected AbstractSpimData<?> |
OpenImagePlusPlugIn.load(ij.ImagePlus imp,
ArrayList<ConverterSetup> converterSetups,
ArrayList<SourceAndConverter<?>> sources,
int setup_id_offset) |
Modifier and Type | Class and Description |
---|---|
class |
RealARGBColorConverterSetup |
Modifier and Type | Method and Description |
---|---|
List<ConverterSetup> |
SetupAssignments.getConverterSetups()
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
void |
SetupAssignments.addSetup(ConverterSetup setup)
Deprecated.
Add the setup in a new group.
|
void |
MinMaxGroup.addSetup(ConverterSetup setup)
Add a
ConverterSetup which will have its
display range updated to
the interval (BoundedIntervalDouble.getMinBoundedValue() ,
BoundedIntervalDouble.getMaxBoundedValue() ). |
MinMaxGroup |
SetupAssignments.getMinMaxGroup(ConverterSetup setup)
Deprecated.
|
void |
SetupAssignments.moveSetupToGroup(ConverterSetup setup,
MinMaxGroup group)
Deprecated.
Add the specified setup to the specified group.
|
void |
SetupAssignments.removeSetup(ConverterSetup setup)
Deprecated.
|
boolean |
MinMaxGroup.removeSetup(ConverterSetup setup)
Remove a
ConverterSetup from this group. |
boolean |
SetupAssignments.removeSetupFromGroup(ConverterSetup setup,
MinMaxGroup group)
Deprecated.
Remove the specified setup from the specified group.
|
void |
ConverterSetup.SetupChangeListener.setupParametersChanged(ConverterSetup setup) |
Constructor and Description |
---|
SetupAssignments(ArrayList<ConverterSetup> converterSetups,
double defaultRangeMin,
double defaultRangeMax)
Deprecated.
|
SetupAssignments(ArrayList<ConverterSetup> converterSetups,
double fullRangeMin,
double fullRangeMax,
double defaultRangeMin,
double defaultRangeMax)
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
List<ConverterSetup> |
SourceTable.getSelectedConverterSetups() |
Modifier and Type | Class and Description |
---|---|
class |
PlaceHolderConverterSetup |
Modifier and Type | Method and Description |
---|---|
List<ConverterSetup> |
BdvStackSource.getConverterSetups() |
Constructor and Description |
---|
PlaceHolderOverlayInfo(ViewerPanel viewer,
SourceAndConverter<?> source,
ConverterSetup converterSetup) |
Constructor and Description |
---|
BdvStackSource(BdvHandle bdv,
int numTimepoints,
T type,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<T>> sources) |
Modifier and Type | Class and Description |
---|---|
class |
BigWarpConverterSetupWrapper
Deprecated.
|
Modifier and Type | Field and Description |
---|---|
protected ConverterSetup |
BigWarpConverterSetupWrapper.cs
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
ConverterSetup |
SourceToConverterSetupBimap.getConverterSetup(SourceAndConverter<?> source) |
ConverterSetup |
ConverterSetups.getConverterSetup(SourceAndConverter<?> source) |
ConverterSetup |
BigWarpConverterSetupWrapper.getSourceConverterSetup()
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
default List<ConverterSetup> |
SourceToConverterSetupBimap.getConverterSetups(List<? extends SourceAndConverter<?>> sources)
Returns list of all non-
null ConverterSetups associated to
sources . |
Modifier and Type | Method and Description |
---|---|
Bounds |
ConverterSetupBounds.getBounds(ConverterSetup setup) |
SourceAndConverter<?> |
SourceToConverterSetupBimap.getSource(ConverterSetup converterSetup) |
SourceAndConverter<?> |
ConverterSetups.getSource(ConverterSetup setup) |
void |
ConverterSetups.put(SourceAndConverter<?> source,
ConverterSetup setup) |
void |
ConverterSetupBounds.setBounds(ConverterSetup setup,
Bounds bounds) |
Constructor and Description |
---|
BigWarpConverterSetupWrapper(BigWarp bw,
ConverterSetup cs)
Deprecated.
|
Modifier and Type | Field and Description |
---|---|
List<ConverterSetup> |
BigWarp.BigWarpData.converterSetups |
Modifier and Type | Method and Description |
---|---|
static void |
BigWarpInit.initSetup(Source<?> src,
int setupId,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<?>> sources) |
static void |
BigWarpInit.initSetups(AbstractSpimData<?> spimData,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<?>> sources) |
static void |
BigWarpInit.initSourceARGB(Source<ARGBType> src,
int setupId,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<?>> sources) |
static <T extends RealType<T>> |
BigWarpInit.initSourceReal(Source<T> src,
int setupId,
List<ConverterSetup> converterSetups,
List<SourceAndConverter<?>> sources) |
static void |
BigWarpExporter.updateBrightnessContrast(ij.ImagePlus imp,
List<ConverterSetup> convSetups,
int[] indexList) |
Constructor and Description |
---|
BigWarpARGBExporter(List<SourceAndConverter<ARGBType>> sources,
List<ConverterSetup> convSetups,
int[] movingSourceIndexList,
int[] targetSourceIndexList,
Interpolation interp,
ProgressWriter progress) |
BigWarpData(List<SourceAndConverter<T>> sources,
List<ConverterSetup> converterSetups,
CacheControl cache,
int[] movingSourceIndices,
int[] targetSourceIndices) |
BigWarpExporter(List<SourceAndConverter<T>> sourcesIn,
List<ConverterSetup> convSetups,
int[] movingSourceIndexList,
int[] targetSourceIndexList,
Interpolation interp,
ProgressWriter progress) |
BigWarpRealExporter(List<SourceAndConverter<T>> sources,
List<ConverterSetup> convSetups,
int[] movingSourceIndexList,
int[] targetSourceIndexList,
Interpolation interp,
T baseType,
boolean needConversion,
ProgressWriter progress) |
BigWarpRealExporter(List<SourceAndConverter<T>> sources,
List<ConverterSetup> convSetups,
int[] movingSourceIndexList,
int[] targetSourceIndexList,
Interpolation interp,
T baseType,
ProgressWriter progress) |
Modifier and Type | Method and Description |
---|---|
void |
ImagePlusLoader.ColorSettings.updateSetup(ConverterSetup setup) |
Modifier and Type | Method and Description |
---|---|
static void |
ViewSetupExplorerPanel.colorSources(List<ConverterSetup> cs,
long j) |
static void |
ViewSetupExplorerPanel.whiteSources(List<ConverterSetup> cs) |
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