| Package | Description |
|---|---|
| io.scif |
Provides the interfaces and default implementations for the components of
SCIFIO, and the context for instantiating these components.
|
| io.scif.filters |
Provides wrapping classes for modifying the performance of one or more of a
{link io.scif.Format}'s components.
|
| io.scif.formats |
Provides
Format implementations for all file formats that are
supported by default in SCIFIO. |
| io.scif.formats.qt | |
| io.scif.gui |
Provides classes for working with
BufferedImage in
SCIFIO. |
| Modifier and Type | Interface and Description |
|---|---|
interface |
Parser
Interface for all SCIFIO Parsers.
|
interface |
Reader
Interface for all SCIFIO Readers.
|
interface |
TypedParser<M extends TypedMetadata>
Interface for all
Parser implementations that use generic
parameters. |
interface |
TypedReader<M extends TypedMetadata,P extends DataPlane<?>>
Interface for all
Reader implementations that use generic
parameters. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractGroupable
Abstract super-class for all
Groupable components. |
class |
AbstractParser<M extends TypedMetadata>
Abstract superclass of all SCIFIO
Parser implementations. |
class |
AbstractReader<M extends TypedMetadata,P extends DataPlane<?>>
Abstract superclass of all SCIFIO
Reader implementations. |
class |
ByteArrayReader<M extends TypedMetadata>
Abstract superclass for all
Reader implementations that
return a ByteArrayPlane when reading datasets. |
class |
DefaultParser
Default
Parser implementation. |
class |
DefaultReader
Non-functional default
Reader implementation. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractReaderFilter
|
class |
ChannelFiller
For indexed color data representing true color, factors out the indices,
replacing them with the color table values directly.
|
class |
DimensionSwapper
Handles swapping the dimension order of an image series.
|
class |
FileStitcher
Logic to stitch together files with similar names.
|
class |
MinMaxFilter
Logic to compute minimum and maximum values for each plane.
|
class |
PlaneSeparator
Logic to automatically separate the channels in a file.
|
class |
ReaderFilter
MasterFilter for wrapping Reader
components. |
| Modifier and Type | Class and Description |
|---|---|
static class |
APNGFormat.Parser
File format SCIFIO Parser for Animated Portable Network Graphics (APNG)
images.
|
static class |
APNGFormat.Reader
File format SCIFIO Reader for Animated Portable Network Graphics (APNG)
images.
|
static class |
AVIFormat.Parser |
static class |
AVIFormat.Reader |
static class |
BMPFormat.Parser |
static class |
BMPFormat.Reader |
static class |
DICOMFormat.Parser |
static class |
DICOMFormat.Reader |
static class |
EPSFormat.Parser |
static class |
EPSFormat.Reader |
static class |
FITSFormat.Parser |
static class |
FITSFormat.Reader |
static class |
GIFFormat.Parser |
static class |
GIFFormat.Reader |
static class |
ICSFormat.Parser
SCIFIO file format Parser for ICS images.
|
static class |
ICSFormat.Reader
File format SCIFIO Reader for Image Cytometry Standard (ICS) images.
|
static class |
ImageIOFormat.Parser<M extends ImageIOFormat.Metadata> |
static class |
ImageIOFormat.Reader<M extends ImageIOFormat.Metadata> |
static class |
JPEG2000Format.Parser |
static class |
JPEG2000Format.Reader |
static class |
JPEGFormat.Parser |
static class |
JPEGFormat.Reader |
static class |
JPEGTileFormat.Parser |
static class |
JPEGTileFormat.Reader |
static class |
KontronFormat.Parser |
static class |
KontronFormat.Reader |
static class |
MicromanagerFormat.Parser |
static class |
MicromanagerFormat.Reader |
static class |
MinimalTIFFFormat.Parser<M extends MinimalTIFFFormat.Metadata> |
static class |
MinimalTIFFFormat.Reader<M extends MinimalTIFFFormat.Metadata> |
static class |
MNGFormat.Parser |
static class |
MNGFormat.Reader |
static class |
NRRDFormat.Parser |
static class |
NRRDFormat.Reader |
static class |
PCXFormat.Parser |
static class |
PCXFormat.Reader |
static class |
PGMFormat.Parser |
static class |
PGMFormat.Reader |
static class |
ScancoISQFormat.Parser |
static class |
ScancoISQFormat.Reader |
static class |
StratecPQCTFormat.Parser |
static class |
StratecPQCTFormat.Reader |
static class |
TestImgFormat.Parser
Parser for Fake file format.
|
static class |
TestImgFormat.Reader
Reader for the Fake file format.
|
static class |
TIFFFormat.BaseTIFFParser
BaseTiffParser is the superclass for file format readers compatible with or
derived from the TIFF 6.0 file format.
|
static class |
TIFFFormat.Parser |
static class |
TIFFFormat.Reader<M extends TIFFFormat.Metadata>
TiffReader is the file format reader for regular TIFF files, not of any
specific TIFF variant.
|
static class |
TIFFJAIFormat.Parser |
static class |
TIFFJAIFormat.Reader |
| Modifier and Type | Class and Description |
|---|---|
static class |
LegacyQTFormat.Parser |
static class |
LegacyQTFormat.Reader |
static class |
NativeQTFormat.Parser |
static class |
NativeQTFormat.Reader |
static class |
PICTFormat.Parser |
static class |
PICTFormat.Reader |
| Modifier and Type | Class and Description |
|---|---|
class |
BufferedImageReader<M extends TypedMetadata>
BufferedImageReader is the superclass for file format readers that use
java.awt.image.BufferedImage as the native data type.
|
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