io.scif

Class ByteArrayReader<M extends TypedMetadata>

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

io.scif.AbstractSCIFIOPlugin

io.scif.AbstractHasFormat

io.scif.AbstractHasSource

io.scif.AbstractGroupable

io.scif.AbstractReader<M,ByteArrayPlane>

io.scif.ByteArrayReader<M>

Type Parameters:

M - - The Metadata type required by this Reader.

All Implemented Interfaces:

Groupable, HasFormat, HasSource, Reader, SCIFIOPlugin, TypedReader<M,ByteArrayPlane>, Comparable<org.scijava.Prioritized>, org.scijava.Contextual, org.scijava.Identifiable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.plugin.HasPluginInfo, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.Prioritized, org.scijava.Versioned

Direct Known Subclasses:

AVIFormat.Reader, BMPFormat.Reader, DefaultReader, DICOMFormat.Reader, EPSFormat.Reader, FITSFormat.Reader, GIFFormat.Reader, ICSFormat.Reader, JPEG2000Format.Reader, JPEGTileFormat.Reader, KontronFormat.Reader, MicromanagerFormat.Reader, MinimalTIFFFormat.Reader, NativeQTFormat.Reader, NRRDFormat.Reader, PCXFormat.Reader, PGMFormat.Reader, PICTFormat.Reader, ScancoISQFormat.Reader, StratecPQCTFormat.Reader, TestImgFormat.Reader

public abstract class ByteArrayReader<M extends TypedMetadata>
extends AbstractReader<M,ByteArrayPlane>

Abstract superclass for all Reader implementations that return a ByteArrayPlane when reading datasets.

Author:

Mark Hiner

See Also:

Reader, ByteArrayPlane

Constructor Summary

Constructors

Constructor and Description
ByteArrayReader()

Method Summary

Modifier and Type	Method and Description
ByteArrayPlane	createPlane(ImageMetadata meta, net.imglib2.Interval bounds) Creates a blank plane compatible with this reader.
ByteArrayPlane	createPlane(net.imglib2.Interval bounds) Creates a blank plane compatible with this reader.

Methods inherited from class io.scif.AbstractReader

castToTypedPlane, close, createDomainArray, getCurrentLocation, getDomains, getHandle, getImageCount, getMetadata, getOptimalTileHeight, getOptimalTileWidth, getPlaneClass, getPlaneCount, hasCompanionFiles, isNormalized, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, readPlane, readPlane, readPlane, readPlane, setMetadata, setMetadata, setNormalized, setSource, setSource, setSource, setSource

Methods inherited from class io.scif.AbstractGroupable

fileGroupOption, isSingleFile

Methods inherited from class io.scif.AbstractHasSource

close

Methods inherited from class io.scif.AbstractHasFormat

asBrowsableLocation, asBrowsableLocation, getFormat, getFormatName

Methods inherited from class io.scif.AbstractSCIFIOPlugin

getVersion, log

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority, toString

Methods inherited from class org.scijava.AbstractContextual

context, getContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface io.scif.TypedReader

openPlane

Methods inherited from interface io.scif.HasFormat

getFormat, getFormatName

Methods inherited from interface io.scif.SCIFIOPlugin

getVersion, log

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface io.scif.HasSource

close

Methods inherited from interface io.scif.Groupable

fileGroupOption, isSingleFile

Constructor Detail

ByteArrayReader

public ByteArrayReader()

Method Detail

createPlane

public ByteArrayPlane createPlane(net.imglib2.Interval bounds)

Description copied from interface: Reader

Creates a blank plane compatible with this reader.

Parameters:

bounds - bounds of the planar axes.

Returns:

The created plane

createPlane

public ByteArrayPlane createPlane(ImageMetadata meta,
                                  net.imglib2.Interval bounds)

Description copied from interface: Reader

Creates a blank plane compatible with this reader.

Parameters:

meta - - ImageMetadata to use to populate the new plane.

bounds - bounds of the planar axes.

Returns:

The created plane