io.scif

Class DefaultReader

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

io.scif.AbstractSCIFIOPlugin

io.scif.AbstractHasFormat

io.scif.AbstractHasSource

io.scif.AbstractGroupable

io.scif.AbstractReader<M,ByteArrayPlane>

io.scif.ByteArrayReader<DefaultMetadata>

io.scif.DefaultReader

All Implemented Interfaces:

DefaultComponent, Groupable, HasFormat, HasSource, Reader, SCIFIOPlugin, TypedReader<DefaultMetadata,ByteArrayPlane>, Comparable<org.scijava.Prioritized>, org.scijava.Contextual, org.scijava.Identifiable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.plugin.HasPluginInfo, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.Prioritized, org.scijava.Versioned

public class DefaultReader
extends ByteArrayReader<DefaultMetadata>
implements DefaultComponent

Non-functional default Reader implementation. For use in Formats that do not need a Reader.

Author:

Mark Hiner

See Also:

Reader, Format

Constructor Summary

Constructors

Constructor and Description
DefaultReader()

Method Summary

Modifier and Type	Method and Description
protected String[]	createDomainArray() Helper method to lazily create the domain array for this reader instance, to avoid constantly re-creating the array.
Format	getFormat() Provides a link back to the format associated with this component.
ByteArrayPlane	openPlane(int imageIndex, long planeIndex, ByteArrayPlane plane, net.imglib2.Interval bounds, SCIFIOConfig config) Non-functional openPlane implementation.

Methods inherited from class io.scif.ByteArrayReader

createPlane, createPlane

Methods inherited from class io.scif.AbstractReader

castToTypedPlane, close, getCurrentLocation, getDomains, getHandle, getImageCount, getMetadata, getOptimalTileHeight, getOptimalTileWidth, getPlaneClass, getPlaneCount, hasCompanionFiles, isNormalized, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, openPlane, readPlane, readPlane, readPlane, readPlane, setMetadata, setMetadata, setNormalized, setSource, setSource, setSource, setSource

Methods inherited from class io.scif.AbstractGroupable

fileGroupOption, isSingleFile

Methods inherited from class io.scif.AbstractHasSource

close

Methods inherited from class io.scif.AbstractHasFormat

asBrowsableLocation, asBrowsableLocation, getFormatName

Methods inherited from class io.scif.AbstractSCIFIOPlugin

getVersion, log

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority, toString

Methods inherited from class org.scijava.AbstractContextual

context, getContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface io.scif.HasFormat

getFormatName

Methods inherited from interface io.scif.SCIFIOPlugin

getVersion, log

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface io.scif.HasSource

close

Methods inherited from interface io.scif.Groupable

fileGroupOption, isSingleFile

Constructor Detail

DefaultReader

public DefaultReader()

Method Detail

getFormat

public Format getFormat()

Description copied from interface: HasFormat

Provides a link back to the format associated with this component.

Specified by:

getFormat in interface HasFormat

Overrides:

getFormat in class AbstractHasFormat

Returns:

the associated Format

createDomainArray

protected String[] createDomainArray()

Description copied from class: AbstractReader

Helper method to lazily create the domain array for this reader instance, to avoid constantly re-creating the array.

Specified by:

createDomainArray in class AbstractReader<DefaultMetadata,ByteArrayPlane>

openPlane

public ByteArrayPlane openPlane(int imageIndex,
                                long planeIndex,
                                ByteArrayPlane plane,
                                net.imglib2.Interval bounds,
                                SCIFIOConfig config)
                         throws FormatException,
                                IOException

Non-functional openPlane implementation.

Specified by:

openPlane in interface TypedReader<DefaultMetadata,ByteArrayPlane>

Throws:

UnsupportedOperationException

FormatException

IOException

See Also:

TypedReader.openPlane(int, long, DataPlane, Interval)