| Package | Description |
|---|---|
| net.imglib2.realtransform | |
| net.imglib2.realtransform.inverse | |
| net.imglib2.roi |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractRealTransformSequence<R extends RealTransform>
Shared properties of
RealTransformSequence and
InvertibleRealTransformSequence, sequences of something that extends
RealTransforms. |
class |
RealTransformRandomAccessible<T,R extends RealTransform>
A
RandomAccessible whose samples are generated by rasterizing a
RealRandomAccessible transformed by a RealTransform. |
class |
RealTransformRealRandomAccessible<T,R extends RealTransform>
A
RealRandomAccessible whose samples are generated from a
RealRandomAccessible transformed by an RealTransform. |
| Modifier and Type | Interface and Description |
|---|---|
interface |
AffineGet
An n-dimensional affine transformation whose n×(
n+1) affine transformation matrix can be accessed via row and column
index.
|
interface |
InvertibleRealTransform
Invertible transformation from Rn to Rm
.
|
interface |
ScaleAndTranslationGet
An n transform that applies a scaling first and then shifts coordinates.
|
interface |
ScaleGet
An n-dimensional scale whose fields can be accessed through their
dimension index or as a double array.
|
interface |
TranslationGet
An n-dimensional translation vector whose fields can be accessed
through their dimension index or as a double array.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractAffineTransform
An abstract implementation of an affine transformation that returns default
values referring to the identity transformation for all fields.
|
class |
AbstractRealTransformSequence<R extends RealTransform>
Shared properties of
RealTransformSequence and
InvertibleRealTransformSequence, sequences of something that extends
RealTransforms. |
class |
AbstractScale
n-d arbitrary scaling.
|
class |
AbstractTranslation
n-d translation.
|
class |
AffineTransform
An n-dimensional affine transformation.
|
class |
AffineTransform2D
2d-affine transformation.
|
class |
AffineTransform3D
3d-affine transformation.
|
class |
ClippedTransitionRealTransform
A
RealTransform that transitions between two n-dimensional
RealTransforms. |
class |
DeformationFieldTransform<T extends RealType<T>>
A
RealTransform by continuous offset lookup. |
class |
ExplicitInvertibleRealTransform
An
InvertibleRealTransform for which the forward and inverse
transforms are explicitly given as RealTransforms. |
class |
HomographyTransform2D
2D-homography
RealTransform to be applied to points in 2D-space. |
class |
InterpolatedRealTransform
A
RealTransform that linearly interpolates between two
RealTransforms. |
class |
InversePerspective3D
3d inverse perspective transformation.
|
class |
InverseRealTransform
Final implementation of the inverse of an
InvertibleRealTransform
that simply replaces apply by applyInverse and conversely. |
class |
InvertibleDeformationFieldTransform<T extends RealType<T>> |
class |
InvertibleRealTransformSequence
An
InvertibleRealTransform that is a sequence of
InvertibleRealTransforms. |
class |
Perspective3D
3d perspective transformation.
|
class |
PolarToCartesianTransform2D
Transforms 2D polar to cartesian coordinates.
|
class |
PolynomialTransform2D
A 2D polynomial transform of n-th order.
|
class |
PositionFieldTransform<T extends RealType<T>>
A
RealTransform by continuous coordinate lookup. |
class |
RealTransformSequence
A sequence of
RealTransforms. |
class |
Scale
n-d arbitrary scaling.
|
class |
Scale2D
2-d arbitrary scaling.
|
class |
Scale3D
3-d arbitrary scaling.
|
class |
ScaleAndTranslation
An n transform that applies a scaling first and then shifts coordinates.
|
class |
ScaledPolarToTranslatedCartesianTransform2D
Transforms scaled polar to translated cartesian coordinates.
|
class |
SphericalToCartesianTransform3D
Transforms 3D spherical to cartesian coordinates.
|
class |
ThinplateSplineTransform
An n-dimensional thin plate spline transform backed by John
Bogovic's jitk-tps
library.
|
class |
Translation |
class |
Translation2D
2-dimensional translation.
|
class |
Translation3D
3-dimensional translation.
|
| Modifier and Type | Field and Description |
|---|---|
protected R |
RealTransformRealRandomAccessible.RealTransformRealRandomAccess.transformCopy |
protected R |
RealTransformRandomAccessible.RealTransformRandomAccess.transformCopy |
protected R |
RealTransformRealRandomAccessible.transformToSource |
| Modifier and Type | Method and Description |
|---|---|
RealTransform |
RealTransform.copy()
Create a deep copy of this
RealTransform. |
RealTransform |
PositionFieldTransform.copy() |
RealTransform |
PolynomialTransform2D.copy() |
RealTransform |
DeformationFieldTransform.copy() |
protected static RealTransform |
RealViewsSimplifyUtils.simplifyRealTransform(RealTransform transform) |
| Modifier and Type | Method and Description |
|---|---|
protected static RealTransform |
RealViewsSimplifyUtils.simplifyRealTransform(RealTransform transform) |
| Constructor and Description |
|---|
ClippedTransitionRealTransform(RealTransform a,
RealTransform b,
double min,
double max) |
ExplicitInvertibleRealTransform(RealTransform forwardTransform,
RealTransform inverseTransform)
Creates a new ExplicitInvertibleRealTransform.
|
InterpolatedRealTransform(RealTransform a,
RealTransform b,
double lambda) |
| Modifier and Type | Class and Description |
|---|---|
class |
WrappedIterativeInvertibleRealTransform<T extends RealTransform> |
| Modifier and Type | Interface and Description |
|---|---|
interface |
DifferentiableRealTransform
Transformation that can explicitly compute its derivative (jacobian).
|
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractDifferentiableRealTransform |
class |
InverseRealTransformGradientDescent |
class |
InvertibleTransformByGradientDescent
Use gradient descent to iteratively estimate the inverse of a differentiable
forward transformation.
|
class |
RealTransformFiniteDerivatives
Use finite differences to estimate the jacobian of an arbitrary
RealTransform.
|
class |
RegularizedDifferentiableRealTransform
Wraps and regularizes a
DifferentiableRealTransform. |
class |
WrappedIterativeInvertibleRealTransform<T extends RealTransform> |
| Modifier and Type | Field and Description |
|---|---|
protected T |
WrappedIterativeInvertibleRealTransform.forwardTransform |
protected RealTransform |
RealTransformFiniteDerivatives.transform |
| Modifier and Type | Method and Description |
|---|---|
RealTransform |
InverseRealTransformGradientDescent.copy() |
| Constructor and Description |
|---|
RealTransformFiniteDerivatives(RealTransform transform) |
| Modifier and Type | Method and Description |
|---|---|
RealTransform |
Operators.RealTransformMaskOperator.getTransformToSource() |
| Modifier and Type | Method and Description |
|---|---|
static boolean |
Operators.RealTransformMaskOperator.isContinuous(RealTransform transform)
Checks if the given transform is a continuous transform.
|
default RealMask |
RealMask.transform(RealTransform transformToSource) |
static boolean |
Operators.RealTransformMaskOperator.willPreserveBounds(RealTransform transform)
Checks if the given transform will result in a bounded composite.
|
| Constructor and Description |
|---|
RealTransformMaskOperator(RealTransform transformToSource) |
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