Modifier and Type | Class and Description |
---|---|
class |
PointSampleList<T>
A list of data samples at explicit
integer coordinates . |
Modifier and Type | Class and Description |
---|---|
class |
IterableRandomAccessibleFunction<C extends RealType<C>,O extends RealType<O>>
|
class |
IterableRandomAccessibleFunctionDouble<O extends RealType<O>> |
Modifier and Type | Method and Description |
---|---|
static <T extends RealType<T>> |
BlackTopHat.blackTopHat(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the black top-hat (or bottom-hat) morphological operation on a
RealType source RandomAccessible , using a list of
Shape s as a structuring element, and writes the result on a
specified target which must be an IterableInterval . |
static <T extends Type<T> & Comparable<T> & Sub<T>> |
BlackTopHat.blackTopHat(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T minVal,
T maxVal,
int numThreads)
Performs the black top-hat (or bottom-hat) morphological operation on a
source
RandomAccessible , using a list of Shape s as a
structuring element, and writes the result on a specified target which
must be an IterableInterval . |
static <T extends RealType<T>> |
BlackTopHat.blackTopHat(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the black top-hat (or bottom-hat) morphological operation on a
RealType source RandomAccessible , using a Shape
as a structuring element, and writes the result on a specified target
which must be an IterableInterval . |
static <T extends Type<T> & Comparable<T> & Sub<T>> |
BlackTopHat.blackTopHat(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T minVal,
T maxVal,
int numThreads)
Performs the black top-hat (or bottom-hat) morphological operation on a
source
RandomAccessible , using a Shape as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
Closing.close(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the morphological closing operation on a
RealType source
RandomAccessible , using a list of Shape s as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Closing.close(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T minVal,
T maxVal,
int numThreads)
Performs the morphological closing operation on a source
RandomAccessible , using a list of Shape s as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
Closing.close(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the morphological closing operation on a
RealType source
RandomAccessible , using a Shape as a structuring element,
and writes the result on a specified target which must be an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Closing.close(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T minVal,
T maxVal,
int numThreads)
Performs the morphological closing operation on a source
RandomAccessible , using a Shape as a structuring element,
and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
Dilation.dilate(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the dilation morphological operation, on a
RealType
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Dilation.dilate(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T minVal,
int numThreads)
Performs the dilation morphological operation, using a
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends RealType<T>> |
Dilation.dilate(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the dilation morphological operation, on a
RealType
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Dilation.dilate(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T minVal,
int numThreads)
Performs the dilation morphological operation, using a
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends RealType<T>> |
Erosion.erode(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the erosion morphological operation, on a
RealType
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Erosion.erode(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T maxVal,
int numThreads)
Performs the erosion morphological operation, using a
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends RealType<T>> |
Erosion.erode(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the erosion morphological operation, on a
RealType
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Erosion.erode(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T maxVal,
int numThreads)
Performs the erosion morphological operation, using a
RandomAccessible as a source and writing results in an
IterableInterval . |
static <T extends RealType<T>> |
Opening.open(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the morphological opening operation on a
RealType source
RandomAccessible , using a list of Shape s as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Opening.open(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T minVal,
T maxVal,
int numThreads)
Performs the morphological opening operation on a source
RandomAccessible , using a list of Shape s as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
Opening.open(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the morphological opening operation on a
RealType source
RandomAccessible , using a Shape as a structuring element,
and writes the result on a specified target which must be an
IterableInterval . |
static <T extends Type<T> & Comparable<T>> |
Opening.open(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T minVal,
T maxVal,
int numThreads)
Performs the morphological opening operation on a source
RandomAccessible , using a Shape as a structuring element,
and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
TopHat.topHat(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
int numThreads)
Performs the top-hat (white top-hat) morphological operation on a
RealType source RandomAccessible , using a list of
Shape s as a structuring element, and writes the result on a
specified target which must be an IterableInterval . |
static <T extends Type<T> & Comparable<T> & Sub<T>> |
TopHat.topHat(RandomAccessible<T> source,
IterableInterval<T> target,
List<? extends Shape> strels,
T minVal,
T maxVal,
int numThreads)
Performs the top-hat (white top-hat) morphological operation on a source
RandomAccessible , using a list of Shape s as a structuring
element, and writes the result on a specified target which must be an
IterableInterval . |
static <T extends RealType<T>> |
TopHat.topHat(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
int numThreads)
Performs the top-hat (white top-hat) morphological operation on a
RealType source RandomAccessible , using a Shape
as a structuring element, and writes the result on a specified target
which must be an IterableInterval . |
static <T extends Type<T> & Comparable<T> & Sub<T>> |
TopHat.topHat(RandomAccessible<T> source,
IterableInterval<T> target,
Shape strel,
T minVal,
T maxVal,
int numThreads)
Performs the top-hat (white top-hat) morphological operation on a source
RandomAccessible , using a Shape as a structuring element,
and writes the result on a specified target which must be an
IterableInterval . |
Modifier and Type | Method and Description |
---|---|
static <T extends BooleanType<T>> |
Branchpoints.branchpoints(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Bridge.bridge(RandomAccessible<T> source,
IterableInterval<T> target) |
protected <T extends BooleanType<T>> |
Abstract3x3TableOperation.calculate(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Clean.clean(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Endpoints.endpoints(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Fill.fill(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Hbreak.hbreak(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Life.life(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Majority.majority(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Remove.remove(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Spur.spur(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Thicken.thicken(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Thin.thin(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Thin1.thin1(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Thin2.thin2(RandomAccessible<T> source,
IterableInterval<T> target) |
static <T extends BooleanType<T>> |
Vbreak.vbreak(RandomAccessible<T> source,
IterableInterval<T> target) |
Modifier and Type | Interface and Description |
---|---|
interface |
Neighborhood<T> |
Modifier and Type | Method and Description |
---|---|
<T> IterableInterval<Neighborhood<T>> |
Shape.neighborhoods(RandomAccessibleInterval<T> source)
Get an
IterableInterval that contains all Neighborhoods of the source image. |
<T> IterableInterval<Neighborhood<T>> |
DiamondShape.neighborhoods(RandomAccessibleInterval<T> source) |
<T> IterableInterval<Neighborhood<T>> |
Shape.neighborhoodsSafe(RandomAccessibleInterval<T> source)
Get an
IterableInterval that contains all Neighborhoods of the source image. |
<T> IterableInterval<Neighborhood<T>> |
PeriodicLineShape.neighborhoodsSafe(RandomAccessibleInterval<T> source) |
<T> IterableInterval<Neighborhood<T>> |
PairOfPointsShape.neighborhoodsSafe(RandomAccessibleInterval<T> source) |
<T> IterableInterval<Neighborhood<T>> |
HorizontalLineShape.neighborhoodsSafe(RandomAccessibleInterval<T> source) |
Modifier and Type | Class and Description |
---|---|
class |
HyperSphere<T>
TODO
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractNeighborhood<T>
A
Positionable IterableInterval that serves as a local
neighborhood, e.g. |
class |
BufferedRectangularNeighborhood<T extends Type<T>> |
class |
EllipseNeighborhood<T> |
class |
EllipsoidNeighborhood<T>
This class implements a
IterableInterval representing the volume of a
3D ellipsoid. |
class |
HyperSphereNeighborhoodGPL<T>
Deprecated.
|
class |
RectangleNeighborhoodGPL<T>
A
Positionable IterableInterval that serves as a local
neighborhood, e.g. |
Modifier and Type | Class and Description |
---|---|
class |
LocalNeighborhood<T>
Deprecated.
|
class |
LocalNeighborhood2<T>
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
static <T extends Comparable<T>> |
Max.findMax(IterableInterval<T> iterable)
Find the maximum value and its position in an
IterableInterval . |
static <T extends Comparable<T>> |
Min.findMin(IterableInterval<T> iterable)
Find the minimum value and its position in an
IterableInterval . |
static <T extends NumericType<T> & Comparable<T>> |
Normalize.normalize(IterableInterval<T> iterable,
T min,
T max)
Normalize values of an
IterableInterval to the range [min, max]. |
Constructor and Description |
---|
ComputeMinMax(IterableInterval<T> interval,
T min,
T max) |
Modifier and Type | Class and Description |
---|---|
class |
CachedCellImg<T extends NativeType<T>,A>
A
LazyCellImg that creates empty Cells lazily when they are accessed
and stores (modified) Cells in a disk cache when memory runs full. |
class |
DiskCachedCellImg<T extends NativeType<T>,A>
A
LazyCellImg that creates empty Cells lazily when they are accessed
and stores (modified) Cells in a disk cache when memory runs full. |
class |
SingleCellArrayImg<T extends NativeType<T>,A extends ArrayDataAccess<A>>
A
NativeImg representing a single cell of an AbstractCellImg . |
Modifier and Type | Class and Description |
---|---|
class |
AbstractConvertedIterableRandomAccessibleInterval<A,B,S extends RandomAccessible<A> & IterableInterval<A>>
TODO
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractConvertedIterableInterval<A,B>
TODO
|
class |
AbstractConvertedIterableRandomAccessibleInterval<A,B,S extends RandomAccessible<A> & IterableInterval<A>>
TODO
|
Modifier and Type | Method and Description |
---|---|
static <A,B extends Type<B>,S extends RandomAccessible<A> & IterableInterval<A>> |
Converters.convertRandomAccessibleIterableInterval(S source,
SamplerConverter<? super A,B> converter)
Create an
WriteConvertedIterableRandomAccessibleInterval whose
RandomAccesses and Cursors
Sampler.get() you a converted sample. |
static <A,B extends Type<B>,S extends RandomAccessible<A> & IterableInterval<A>> |
Converters.convertRandomAccessibleIterableInterval(S source,
Supplier<SamplerConverter<? super A,B>> converterSupplier)
Create an
WriteConvertedIterableRandomAccessibleInterval whose
RandomAccesses and Cursors
Sampler.get() you a converted sample. |
Modifier and Type | Method and Description |
---|---|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
Converter<? super A,? super B> converter,
B b)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
BiConverter<? super A,? super B,? super C> converter,
C c)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
Supplier<BiConverter<? super A,? super B,? super C>> converterSupplier,
C c)
|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
Supplier<Converter<? super A,? super B>> converterSupplier,
B b)
|
Modifier and Type | Method and Description |
---|---|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
Converter<? super A,? super B> converter,
B b)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
BiConverter<? super A,? super B,? super C> converter,
C c)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
BiConverter<? super A,? super B,? super C> converter,
C c)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
Supplier<BiConverter<? super A,? super B,? super C>> converterSupplier,
C c)
|
static <A,B,C extends Type<C>> |
Converters.convert(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
Supplier<BiConverter<? super A,? super B,? super C>> converterSupplier,
C c)
|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
SamplerConverter<? super A,B> converter)
|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
Supplier<Converter<? super A,? super B>> converterSupplier,
B b)
|
static <A,B extends Type<B>> |
Converters.convert(IterableInterval<A> source,
Supplier<SamplerConverter<? super A,B>> converterSupplier)
|
Constructor and Description |
---|
AbstractConvertedIterableInterval(IterableInterval<A> source) |
Modifier and Type | Class and Description |
---|---|
class |
BiConvertedIterableInterval<A,B,C extends Type<C>>
TODO
|
class |
ConvertedIterableInterval<A,B extends Type<B>>
TODO
|
Modifier and Type | Field and Description |
---|---|
protected IterableInterval<B> |
BiConvertedIterableInterval.sourceIntervalB |
Constructor and Description |
---|
BiConvertedIterableInterval(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
BiConverter<? super A,? super B,? super C> converter,
C c)
Creates a copy of c for conversion.
|
BiConvertedIterableInterval(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
BiConverter<? super A,? super B,? super C> converter,
C c)
Creates a copy of c for conversion.
|
BiConvertedIterableInterval(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
Supplier<BiConverter<? super A,? super B,? super C>> converterSupplier,
C c)
Creates a copy of c for conversion.
|
BiConvertedIterableInterval(IterableInterval<A> sourceA,
IterableInterval<B> sourceB,
Supplier<BiConverter<? super A,? super B,? super C>> converterSupplier,
C c)
Creates a copy of c for conversion.
|
ConvertedIterableInterval(IterableInterval<A> source,
Converter<? super A,? super B> converter,
B b)
Creates a copy of b for conversion.
|
ConvertedIterableInterval(IterableInterval<A> source,
Supplier<Converter<? super A,? super B>> converterSupplier,
B b)
Creates a copy of b for conversion.
|
Modifier and Type | Class and Description |
---|---|
class |
WriteConvertedIterableRandomAccessibleInterval<A,B,S extends RandomAccessible<A> & IterableInterval<A>>
TODO
|
Modifier and Type | Class and Description |
---|---|
class |
WriteConvertedIterableInterval<A,B>
TODO
|
class |
WriteConvertedIterableRandomAccessibleInterval<A,B,S extends RandomAccessible<A> & IterableInterval<A>>
TODO
|
Constructor and Description |
---|
WriteConvertedIterableInterval(IterableInterval<A> source,
SamplerConverter<? super A,B> converter) |
WriteConvertedIterableInterval(IterableInterval<A> source,
Supplier<SamplerConverter<? super A,B>> converterSupplier) |
Modifier and Type | Field and Description |
---|---|
protected IterableInterval<B> |
IterableIntervalProjector2D.target |
Constructor and Description |
---|
IterableIntervalProjector2D(int dimX,
int dimY,
RandomAccessible<A> source,
IterableInterval<B> target,
Converter<? super A,B> converter)
creates a new 2D projector that samples a plain in the dimensions dimX,
dimY.
|
MultithreadedIterableIntervalProjector2D(int dimX,
int dimY,
RandomAccessible<A> source,
IterableInterval<B> target,
Converter<? super A,B> converter,
ExecutorService service) |
MultithreadedIterableIntervalProjector2D(int dimX,
int dimY,
RandomAccessible<A> source,
IterableInterval<B> target,
Converter<? super A,B> converter,
ExecutorService service,
int nTasks) |
Constructor and Description |
---|
CompositeXYProjector(RandomAccessibleInterval<A> source,
IterableInterval<ARGBType> target,
ArrayList<Converter<A,ARGBType>> converters,
int dimIndex) |
Modifier and Type | Field and Description |
---|---|
protected IterableInterval<B> |
SamplingProjector2D.target |
Constructor and Description |
---|
SamplingProjector2D(int dimX,
int dimY,
RandomAccessible<A> source,
IterableInterval<B> target,
Converter<ProjectedSampler<A>,B> converter,
int projectedDimension,
long[] projectedPositions) |
SamplingProjector2D(int dimX,
int dimY,
RandomAccessibleInterval<A> source,
IterableInterval<B> target,
Converter<ProjectedSampler<A>,B> converter,
int projectedDimension) |
Modifier and Type | Class and Description |
---|---|
class |
ARGBScreenImage |
class |
ArrayImgAWTScreenImage<T extends NativeType<T>,A>
An
AWTScreenImage that is an ArrayImg . |
class |
ByteAWTScreenImage
A
AWTScreenImage that is an ArrayImg<ByteType, ByteArray> . |
class |
DoubleAWTScreenImage
A
AWTScreenImage that is an ArrayImg<DoubleType, DoubleArray>
. |
class |
FloatAWTScreenImage
A
AWTScreenImage that is an ArrayImg<FloatType, FloatArray> . |
class |
IntAWTScreenImage
A
AWTScreenImage that is an ArrayImg<ShortType, ShortArray> . |
class |
ShortAWTScreenImage
A
AWTScreenImage that is an ArrayImg<ShortType, ShortArray> . |
class |
UnsignedByteAWTScreenImage
A
AWTScreenImage that is an
ArrayImg<UnsignedByteType, ByteArray> . |
class |
UnsignedIntAWTScreenImage
A
AWTScreenImage that is an ArrayImg<ShortType, ShortArray> . |
class |
UnsignedShortAWTScreenImage
A
AWTScreenImage that is an
ArrayImg<UnsignedShortType, ShortArray> . |
Modifier and Type | Class and Description |
---|---|
class |
DiscreteFrequencyDistribution
This class represents an n-dimensional set of counters.
|
class |
Histogram1d<T>
A Histogram1d is a histogram that tracks up to four kinds of values: 1)
values in the center of the distribution 2) values to the left of the center
of the distribution (lower tail) 3) values to the right of the center of the
distribution (upper tail) 4) values outside the other areas
|
class |
HistogramNd<T>
A HistogramNd is an n-dimensional histogram that tracks up to four kinds of
values: 1) values in the center of the distribution 2) values to the left of
the center of the distribution (lower tail) 3) values to the right of the
center of the distribution (upper tail) 4) values outside the other areas
|
Modifier and Type | Interface and Description |
---|---|
interface |
Img<T>
An
Img is a RandomAccessibleInterval that has its min at
0n and its max positive. |
interface |
NativeImg<T extends Type<T>,A>
TODO
|
interface |
NativeLongAccessImg<T extends Type<T>,A>
TODO
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractImg<T>
TODO
|
class |
AbstractNativeImg<T extends NativeType<T>,A>
TODO
|
class |
AbstractNativeLongAccessImg<T extends NativeLongAccessType<T>,A>
TODO
|
class |
ImgView<T extends Type<T>>
Allows a
RandomAccessibleInterval to be treated as an Img . |
Modifier and Type | Class and Description |
---|---|
class |
ArrayImg<T extends NativeType<T>,A>
This
Img stores an image in a single linear array of basic types. |
Modifier and Type | Class and Description |
---|---|
class |
AbstractCellImg<T extends NativeType<T>,A,C extends Cell<A>,I extends RandomAccessible<C> & IterableInterval<C>>
Abstract superclass for
Img types that divide their underlying data
into cells. |
Modifier and Type | Class and Description |
---|---|
class |
AbstractCellImg<T extends NativeType<T>,A,C extends Cell<A>,I extends RandomAccessible<C> & IterableInterval<C>>
Abstract superclass for
Img types that divide their underlying data
into cells. |
class |
CellImg<T extends NativeType<T>,A> |
class |
LazyCellImg<T extends NativeType<T>,A>
A
AbstractCellImg that obtains its Cells lazily when they are
accessed. |
static class |
LazyCellImg.LazyCells<T> |
Modifier and Type | Class and Description |
---|---|
class |
ByteImagePlus<T extends NativeType<T>>
ImagePlusImg for byte-stored data. |
class |
FloatImagePlus<T extends NativeType<T>>
ImagePlusImg for float-stored data. |
class |
ImagePlusImg<T extends NativeType<T>,A extends ArrayDataAccess<A>>
A container that stores data in an array of 2D slices each as a linear array
of basic types.
|
class |
IntImagePlus<T extends NativeType<T>>
ImagePlusImg for integer-stored data. |
class |
ShortImagePlus<T extends NativeType<T>>
ImagePlusImg for short-stored data. |
Modifier and Type | Class and Description |
---|---|
class |
AbstractListImg<T>
Abstract base class for
Img that store pixels in a single linear
array (an ArrayList or similar).In principle, the number of entities
stored is limited to Integer.MAX_VALUE . |
class |
AbstractLongListImg<T>
Abstract base class for
Img that store pixels in a single linear
list addressed by a long. |
class |
ListImg<T>
|
Modifier and Type | Class and Description |
---|---|
class |
PlanarImg<T extends NativeType<T>,A extends ArrayDataAccess<A>>
A
NativeImg that stores data in an list of primitive arrays, one per
image plane. |
Modifier and Type | Class and Description |
---|---|
class |
NtreeImg<T extends NativeType<T>,A extends NtreeAccess<?,A>> |
Modifier and Type | Class and Description |
---|---|
class |
UnsafeImg<T extends NativeLongAccessType<T>,A>
This
Img stores an image in a single linear array of basic types. |
Modifier and Type | Interface and Description |
---|---|
interface |
Labeling<T extends Comparable<T>>
Deprecated.
|
interface |
NativeLabeling<T extends Comparable<T>>
Deprecated.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractLabeling<T extends Comparable<T>>
Deprecated.
|
class |
AbstractNativeLabeling<T extends Comparable<T>>
Deprecated.
|
class |
LabelingView<L extends Comparable<L>>
Deprecated.
|
class |
NativeImgLabeling<T extends Comparable<T>,I extends IntegerType<I>>
Deprecated.
|
Modifier and Type | Interface and Description |
---|---|
interface |
IterableRegion<T extends BooleanType<T>>
A region that allows to iterate only the pixels contained in the region
(instead of all pixels in bounding box).
|
interface |
PositionableIterableInterval<T>
An
IterableInterval that can be moved around. |
interface |
PositionableIterableRegion<T extends BooleanType<T>>
An
IterableRegion that can be moved around. |
Modifier and Type | Class and Description |
---|---|
protected class |
AbstractIterableRegionOfInterest.AROIClippedIterableInterval<T extends Type<T>>
Deprecated.
|
protected class |
AbstractIterableRegionOfInterest.AROIIterableInterval<T extends Type<T>>
Deprecated.
|
protected class |
BinaryMaskRegionOfInterest.BMROIIterableInterval<TT extends Type<TT>>
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
<T extends Type<T>> |
IterableRegionOfInterest.getIterableIntervalOverROI(RandomAccessible<T> src)
Deprecated.
Given a sampler in the ROI's space, provide an iterable that can make
iterators over the space, sampling pixels from the sampler.
|
<T extends Type<T>> |
AbstractIterableRegionOfInterest.getIterableIntervalOverROI(RandomAccessible<T> src)
Deprecated.
|
<TT extends Type<TT>> |
BinaryMaskRegionOfInterest.getIterableIntervalOverROI(RandomAccessible<TT> src)
Deprecated.
|
static <T> IterableInterval<T> |
Regions.sample(IterableInterval<Void> region,
RandomAccessible<T> img)
Given a region and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
static <T> IterableInterval<T> |
Regions.sample(MaskInterval mask,
RandomAccessible<T> img)
Given a mask and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
static <T> IterableInterval<T> |
Regions.sample(RealMaskRealInterval mask,
RandomAccessible<T> img)
Given a mask and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
static <T> IterableInterval<T> |
Regions.sampleWithMask(Mask mask,
RandomAccessibleInterval<T> img)
Given a mask and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
static <T,B extends BooleanType<B>> |
Regions.sampleWithRandomAccessible(RandomAccessible<B> mask,
RandomAccessibleInterval<T> img)
Given a mask and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
static <T> IterableInterval<T> |
Regions.sampleWithRealMask(RealMask mask,
RandomAccessibleInterval<T> img)
Given a mask and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
Modifier and Type | Method and Description |
---|---|
static <T> IterableInterval<T> |
Regions.sample(IterableInterval<Void> region,
RandomAccessible<T> img)
Given a region and an image, return an
IterableInterval over the
pixels of the image inside the mask. |
Modifier and Type | Class and Description |
---|---|
class |
Boundary<T extends BooleanType<T>>
An
IterableRegion of the boundary pixels of a source boolean
RandomAccessibleInterval . |
Modifier and Type | Class and Description |
---|---|
class |
IterableLine
An immutable line sampled on integer position.
|
Modifier and Type | Class and Description |
---|---|
class |
ImgLabeling<T,I extends IntegerType<I>>
A labeling backed by a
image of integer
indices. |
class |
LabelRegion<T>
Present pixels of a given label in a
ImgLabeling as a
PositionableIterableRegion . |
Modifier and Type | Class and Description |
---|---|
class |
PositionableWrappedIterableInterval<T,S extends IterableInterval<T>>
Makes a
IterableInterval Positionable by wrapping its cursors
with an offset. |
Modifier and Type | Class and Description |
---|---|
class |
IterableRandomAccessibleRegion<T extends BooleanType<T>>
Deprecated.
|
class |
IterableRegionOnBooleanRAI<T extends BooleanType<T>>
Wrap a boolean
RandomAccessibleInterval as a IterableRegion . |
class |
PositionableWrappedIterableInterval<T,S extends IterableInterval<T>>
Makes a
IterableInterval Positionable by wrapping its cursors
with an offset. |
class |
PositionableWrappedIterableRegion<T extends BooleanType<T>>
Makes a
IterableRegion Positionable by wrapping its accessors
with an offset. |
class |
SamplingIterableInterval<T> |
Modifier and Type | Field and Description |
---|---|
protected S |
PositionableWrappedIterableInterval.source |
Modifier and Type | Method and Description |
---|---|
static <T> SamplingIterableInterval<T> |
SamplingIterableInterval.create(IterableInterval<Void> region,
RandomAccessible<T> target) |
Constructor and Description |
---|
SamplingIterableInterval(IterableInterval<Void> region,
RandomAccessible<T> target) |
Modifier and Type | Method and Description |
---|---|
static Collection<BigInteger> |
FlatCollections.bigIntegerCollection(IterableInterval<? extends IntegerType<?>> image)
Wraps an
IntegerType iterable image as a collection. |
static Collection<Boolean> |
FlatCollections.booleanCollection(IterableInterval<? extends BooleanType<?>> image)
Wraps a
BooleanType iterable image as a collection. |
static <T,E> Collection<E> |
FlatCollections.collection(IterableInterval<T> image,
Function<T,E> converter)
Wraps an
IterableInterval as a Collection . |
static Collection<Double> |
FlatCollections.doubleCollection(IterableInterval<? extends RealType<?>> image)
Wraps a
RealType iterable image as a collection. |
static boolean |
Util.equalIterationOrder(IterableInterval<?>... intervals)
Checks whether n
IterableInterval have the same iteration order. |
static Collection<Float> |
FlatCollections.floatCollection(IterableInterval<? extends RealType<?>> image)
Wraps a
RealType iterable image as a collection. |
static Collection<Integer> |
FlatCollections.integerCollection(IterableInterval<? extends IntegerType<?>> image)
Wraps an
IntegerType iterable image as a collection. |
static Collection<Long> |
FlatCollections.longCollection(IterableInterval<? extends IntegerType<?>> image)
Wraps an
IntegerType iterable image as a collection. |
Modifier and Type | Class and Description |
---|---|
class |
IntervalView<T>
IntervalView is a view that puts
Interval boundaries on its source
RandomAccessible . |
class |
IterableRandomAccessibleInterval<T>
Generates
Cursors that iterate a
RandomAccessibleInterval in flat order, that is: row by row, plane by
plane, cube by cube, ... |
Modifier and Type | Field and Description |
---|---|
protected IterableInterval<T> |
IntervalView.fullViewIterableInterval
TODO Javadoc
|
Modifier and Type | Method and Description |
---|---|
static <T> IterableInterval<T> |
Views.flatIterable(RandomAccessibleInterval<T> randomAccessibleInterval)
Return an
IterableInterval having FlatIterationOrder . |
protected IterableInterval<T> |
IntervalView.getFullViewIterableInterval() |
static <T> IterableInterval<T> |
Views.iterable(RandomAccessibleInterval<T> randomAccessibleInterval)
Return an
IterableInterval . |
Modifier and Type | Method and Description |
---|---|
IterableInterval<T> |
IterableTransformBuilder.buildIterableInterval()
Create an
IterableInterval on the Interval specified in
the constructor of the RandomAccessible specified in the
constructor. |
static <S> IterableInterval<S> |
IterableTransformBuilder.getEfficientIterableInterval(Interval interval,
RandomAccessible<S> randomAccessible)
|
Copyright © 2015–2022 ImgLib2. All rights reserved.