| Modifier and Type | Method and Description |
|---|---|
protected boolean |
Interest_Point_Registration.askForFixedTiles(GlobalOptimizationSubset subset,
GlobalOptimizationType type,
Set<ViewId> fixedTiles,
String title) |
protected boolean |
Interest_Point_Registration.askForReferenceTile(GlobalOptimizationSubset subset,
GlobalOptimizationType type,
String title) |
protected ArrayList<ViewSetup> |
Interest_Point_Registration.getListOfViewSetupPresentInAllSubsets(List<GlobalOptimizationSubset> subsets,
GlobalOptimizationType type) |
boolean |
Interest_Point_Registration.setFixedTilesAndReference(int fixTilesIndex,
int mapBackIndex,
GlobalOptimizationType type)
Assign the right fixed tiles and reference tiles for this type of optimization
|
| Modifier and Type | Method and Description |
|---|---|
boolean |
InterestPointRegistration.register(GlobalOptimizationType registrationType,
boolean save,
boolean collectStatistics)
Registers all timepoints.
|
protected boolean |
InterestPointRegistration.runGlobalOpt(GlobalOptimizationSubset subset,
GlobalOptimizationType registrationType)
Run the global optimization on the subset
|
| Modifier and Type | Method and Description |
|---|---|
protected static <M extends Model<M>> |
GlobalOpt.addAndFixTiles(List<ViewId> views,
HashMap<ViewId,Tile<M>> map,
GlobalOptimizationType registrationType,
GlobalOptimizationSubset subset,
boolean considerTimePointsAsUnit) |
static <M extends Model<M>> |
GlobalOpt.compute(M model,
GlobalOptimizationType registrationType,
GlobalOptimizationSubset subset,
boolean considerTimePointsAsUnit)
Computes a global optimization based on the corresponding points
|
| Modifier and Type | Class and Description |
|---|---|
class |
AllToAllRegistration |
class |
AllToAllRegistrationWithRange |
class |
IndividualTimepointRegistration
A registration type where each timepoint is registered individually
|
class |
ReferenceTimepointRegistration |
| Modifier and Type | Method and Description |
|---|---|
<M extends Model<M>> |
GlobalOptimizationSubset.computeGlobalOpt(M model,
GlobalOptimizationType type,
SpimData2 spimData,
List<ChannelProcess> channelsToProcess,
String description) |
protected <M extends Model<M>> |
GlobalOptimizationSubset.computeMapBackModel(HashMap<ViewId,Tile<M>> tiles,
GlobalOptimizationType type,
SpimData2 spimData) |
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