| Package | Description |
|---|---|
| ini.trakem2.analysis | |
| mpicbg.models | |
| mpicbg.spim.io | |
| mpicbg.spim.preprocessing | |
| mpicbg.trakem2.transform | |
| mpicbg.util |
| Modifier and Type | Method and Description |
|---|---|
static List<VectorString3D> |
Compare.transferVectorStrings(List<VectorString3D> vs,
List<Tuple3d> source,
List<Tuple3d> target,
Class<AffineModel3D> model_class)
Transform all points of all VectorString3D in vs using a Moving Least Squares Transform defined by the pairing of points in source to those in target.
|
| Modifier and Type | Field and Description |
|---|---|
protected AffineModel3D |
InterpolatedAffineModel3D.affine |
| Modifier and Type | Method and Description |
|---|---|
AffineModel3D |
AffineModel3D.copy() |
AffineModel3D |
InterpolatedAffineModel3D.createAffineModel3D() |
AffineModel3D |
AffineModel3D.createInverse()
TODO Not yet tested
|
| Modifier and Type | Method and Description |
|---|---|
void |
AffineModel3D.concatenate(AffineModel3D model) |
void |
AffineModel3D.preConcatenate(AffineModel3D model) |
void |
AffineModel3D.set(AffineModel3D m) |
| Modifier and Type | Method and Description |
|---|---|
static AffineModel3D |
IOFunctions.getModelFromFile(File file) |
| Modifier and Type | Method and Description |
|---|---|
static void |
IOFunctions.reWriteRegistrationFile(File file,
AffineModel3D newModel,
AffineModel3D oldModel,
AffineModel3D preConcatenated) |
| Modifier and Type | Method and Description |
|---|---|
static double |
AutomaticAngleSetup.extractRotationAngle(AffineModel3D modelA,
AffineModel3D modelB,
Vector3d rotationAxis) |
static Vector3d |
AutomaticAngleSetup.extractRotationAxis(AffineModel3D model)
Computes the rotation axis between two affine matrices, assuming that the first affine transform is the identity transform E.
|
static Vector3d |
AutomaticAngleSetup.extractRotationAxis(AffineModel3D modelA,
AffineModel3D modelB)
Computes the rotation axis between two affine matrices.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AffineModel3D |
| Modifier and Type | Method and Description |
|---|---|
static AffineModel3D |
TransformUtils.getAffineModel3D(Transform3D transform) |
| Modifier and Type | Method and Description |
|---|---|
static Matrix4d |
TransformUtils.getMatrix4d(AffineModel3D model) |
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