| Package | Description |
|---|---|
| edu.utexas.clm.crop | |
| ini.trakem2.display | |
| ini.trakem2.io |
| Modifier and Type | Method and Description |
|---|---|
ArrayList<AreaList> |
AreaListCrop.getAreaLists() |
| Modifier and Type | Method and Description |
|---|---|
void |
AreaListCrop.addAreaList(AreaList areaList) |
| Modifier and Type | Method and Description |
|---|---|
static AreaList |
AreaList.merge(ArrayList<Displayable> al)
Merge all arealists contained in the ArrayList to the first one found, and remove the others from the project, and only if they belong to the same LayerSet.
|
AreaList |
AreaList.part(long layer_id,
ShapeRoi sroi)
Subtracts the given ROI, and then creates a new AreaList with identical properties and the content of the subtracted part.
|
| Modifier and Type | Method and Description |
|---|---|
static ArrayList<AreaList> |
AreaList.split(List<Displayable> al)
For each AreaList in the list, find disconnected volumes within each and make an AreaList out of each.
|
| Modifier and Type | Method and Description |
|---|---|
static Collection<AreaList> |
AmiraImporter.extractAmiraLabels(ij.ImagePlus labels,
AmiraParameters ap,
Layer first_layer,
double xo,
double yo)
Returns an ArrayList containing all AreaList objects.
|
static Map<Float,AreaList> |
AmiraImporter.extractAreaLists(ij.ImagePlus imp,
Layer first_layer,
double base_x,
double base_y,
float alpha,
boolean add_background)
Returns a map of label vs AreaList.
|
static Collection<AreaList> |
AmiraImporter.importAmiraLabels(Layer first_layer,
double xo,
double yo,
String default_dir)
Returns the array of AreaList or null if the file dialog is canceled.
|
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