| Package | Description |
|---|---|
| bunwarpj |
Provides the main and utility classes to run the ImageJ/Fiji plugin
bUnwarpJ_: consistent and elastic image registration. |
| Modifier and Type | Method and Description |
|---|---|
static MainDialog |
bUnwarpJ_.getMainDialog()
Get bUnwarpJ main dialog (if exists)
|
| Constructor and Description |
|---|
FinalAction(MainDialog dialog)
Start a thread under the control of the main event loop.
|
IODialog(Frame parentWindow,
ij.ImagePlus sourceImp,
ij.ImagePlus targetImp,
PointHandler sourcePh,
PointHandler targetPh,
MainDialog dialog)
Create a new instance of IODialog.
|
PointAction(ij.ImagePlus imp,
PointHandler ph,
PointToolbar tb,
MainDialog dialog)
Create an instance of PointAction.
|
PointHandler(ij.ImagePlus imp,
PointToolbar tb,
Mask mask,
MainDialog dialog)
Constructor with graphical capabilities, create an instance of PointHandler.
|
PointToolbar(Toolbar previousToolbar,
MainDialog dialog)
Create an instance of PointToolbar.
|
Transformation(ij.ImagePlus sourceImp,
ij.ImagePlus targetImp,
BSplineModel source,
BSplineModel target,
PointHandler sourcePh,
PointHandler targetPh,
Mask sourceMsk,
Mask targetMsk,
double[][] sourceAffineMatrix,
double[][] targetAffineMatrix,
int min_scale_deformation,
int max_scale_deformation,
int min_scale_image,
double divWeight,
double curlWeight,
double landmarkWeight,
double imageWeight,
double consistencyWeight,
double stopThreshold,
int outputLevel,
boolean showMarquardtOptim,
int accurate_mode,
String fn_tnf_1,
String fn_tnf_2,
ij.ImagePlus output_ip_1,
ij.ImagePlus output_ip_2,
MainDialog dialog)
Create an instance of Transformation.
|
Transformation(ij.ImagePlus sourceImp,
ij.ImagePlus targetImp,
BSplineModel source,
BSplineModel target,
PointHandler sourcePh,
PointHandler targetPh,
Mask sourceMsk,
Mask targetMsk,
double[][] sourceAffineMatrix,
double[][] targetAffineMatrix,
int min_scale_deformation,
int max_scale_deformation,
int min_scale_image,
double divWeight,
double curlWeight,
double landmarkWeight,
double imageWeight,
double consistencyWeight,
double stopThreshold,
int outputLevel,
boolean showMarquardtOptim,
int accurate_mode,
String fn_tnf_1,
String fn_tnf_2,
ij.ImagePlus output_ip_1,
ij.ImagePlus output_ip_2,
MainDialog dialog,
ij.process.ImageProcessor originalSourceIP,
ij.process.ImageProcessor originalTargetIP)
Create an instance of Transformation.
|
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