IODialog (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- java.awt.Component
- - java.awt.Container
  - - java.awt.Window
    - - java.awt.Dialog
      - bunwarpj.IODialog

All Implemented Interfaces:

ActionListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible
```
public class IODialog
extends Dialog
implements ActionListener
```
Class to create the Input/Output dialog to deal with the files to keep the information of bUnwarpJ.

See Also:

Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class java.awt.Dialog
  Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityType
- Nested classes/interfaces inherited from class java.awt.Window
  Window.AccessibleAWTWindow, Window.Type
- Nested classes/interfaces inherited from class java.awt.Container
  Container.AccessibleAWTContainer
- Nested classes/interfaces inherited from class java.awt.Component
  Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields
Modifier and Type	Field and Description
`static String`	`ADAPT_COEFFICIENTS` bUnwarpJ_ method name to adapt B-spline coefficients to a scale
`static String`	`COMPARE_ELASTIC_RAW` bUnwarpJ_ method name to compare elastic and raw transforms
`static String`	`COMPARE_OPPOSITE_ELASTIC` bUnwarpJ_ method name to compare opposite elastic transforms
`static String`	`COMPARE_RAW` bUnwarpJ_ method name to compare raw transforms
`static String`	`COMPOSE_ELASTIC` bUnwarpJ_ method name to compose elastic transforms
`static String`	`COMPOSE_RAW` bUnwarpJ_ method name to compose raw transforms
`static String`	`COMPOSE_RAW_ELASTIC` bUnwarpJ_ method name to compose raw and elastic transforms
`static String`	`CONVERT_TO_ELASTIC` bUnwarpJ_ method name to convert raw transform to B-spline format
`static String`	`CONVERT_TO_RAW` bUnwarpJ_ method name to convert elastic transform to raw format
`static String`	`EVALUATE_SIMILARITY` bUnwarpJ_ method name to evaluate similarity between two images
`static String`	`INVERT_RAW` bUnwarpJ_ method name to invert a raw transform
`static String`	`LOAD_ELASTIC_TRANSF` bUnwarpJ_ method name to load an elastic transform
`static String`	`LOAD_LANDMARKS` bUnwarpJ_ method name to load landmarks from file
`static String`	`LOAD_RAW_TRANSF` bUnwarpJ_ method name to load a raw transform
`static String`	`LOAD_SOURCE_AFFINE` bUnwarpJ_ method name to load an affine matrix to the source image
`static String`	`LOAD_SOURCE_MASK` bUnwarpJ_ method name to load a source mask
`static String`	`SAVE_LANDMARKS` bUnwarpJ_ method name to save landmarks to a file
`static String`	`SHOW_LANDMARKS` bUnwarpJ_ method name to show landmarks on a table

Fields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component
accessibleContext, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

Constructors
Constructor and Description
`IODialog(Frame parentWindow, ij.ImagePlus sourceImp, ij.ImagePlus targetImp, PointHandler sourcePh, PointHandler targetPh, MainDialog dialog)` Create a new instance of IODialog.

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`actionPerformed(ActionEvent ae)` Actions to be taking during the dialog.
`Insets`	`getInsets()` Get the insets.
`static void`	`record(String command, String... args)` Macro-record a specific command.

Methods inherited from class java.awt.Dialog
addNotify, getAccessibleContext, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, paramString, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, setVisible, show, toBack

Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, addImpl, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, setLayout, transferFocusDownCycle, update, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphics, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - EVALUATE_SIMILARITY
```
public static final String EVALUATE_SIMILARITY
```
    bUnwarpJ_ method name to evaluate similarity between two images
    
    See Also:
    
    Constant Field Values
  - LOAD_LANDMARKS
```
public static final String LOAD_LANDMARKS
```
    bUnwarpJ_ method name to load landmarks from file
    
    See Also:
    
    Constant Field Values
  - SAVE_LANDMARKS
```
public static final String SAVE_LANDMARKS
```
    bUnwarpJ_ method name to save landmarks to a file
    
    See Also:
    
    Constant Field Values
  - SHOW_LANDMARKS
```
public static final String SHOW_LANDMARKS
```
    bUnwarpJ_ method name to show landmarks on a table
    
    See Also:
    
    Constant Field Values
  - LOAD_ELASTIC_TRANSF
```
public static final String LOAD_ELASTIC_TRANSF
```
    bUnwarpJ_ method name to load an elastic transform
    
    See Also:
    
    Constant Field Values
  - LOAD_RAW_TRANSF
```
public static final String LOAD_RAW_TRANSF
```
    bUnwarpJ_ method name to load a raw transform
    
    See Also:
    
    Constant Field Values
  - COMPARE_OPPOSITE_ELASTIC
```
public static final String COMPARE_OPPOSITE_ELASTIC
```
    bUnwarpJ_ method name to compare opposite elastic transforms
    
    See Also:
    
    Constant Field Values
  - COMPARE_ELASTIC_RAW
```
public static final String COMPARE_ELASTIC_RAW
```
    bUnwarpJ_ method name to compare elastic and raw transforms
    
    See Also:
    
    Constant Field Values
  - COMPARE_RAW
```
public static final String COMPARE_RAW
```
    bUnwarpJ_ method name to compare raw transforms
    
    See Also:
    
    Constant Field Values
  - CONVERT_TO_RAW
```
public static final String CONVERT_TO_RAW
```
    bUnwarpJ_ method name to convert elastic transform to raw format
    
    See Also:
    
    Constant Field Values
  - CONVERT_TO_ELASTIC
```
public static final String CONVERT_TO_ELASTIC
```
    bUnwarpJ_ method name to convert raw transform to B-spline format
    
    See Also:
    
    Constant Field Values
  - COMPOSE_ELASTIC
```
public static final String COMPOSE_ELASTIC
```
    bUnwarpJ_ method name to compose elastic transforms
    
    See Also:
    
    Constant Field Values
  - COMPOSE_RAW
```
public static final String COMPOSE_RAW
```
    bUnwarpJ_ method name to compose raw transforms
    
    See Also:
    
    Constant Field Values
  - COMPOSE_RAW_ELASTIC
```
public static final String COMPOSE_RAW_ELASTIC
```
    bUnwarpJ_ method name to compose raw and elastic transforms
    
    See Also:
    
    Constant Field Values
  - INVERT_RAW
```
public static final String INVERT_RAW
```
    bUnwarpJ_ method name to invert a raw transform
    
    See Also:
    
    Constant Field Values
  - ADAPT_COEFFICIENTS
```
public static final String ADAPT_COEFFICIENTS
```
    bUnwarpJ_ method name to adapt B-spline coefficients to a scale
    
    See Also:
    
    Constant Field Values
  - LOAD_SOURCE_MASK
```
public static final String LOAD_SOURCE_MASK
```
    bUnwarpJ_ method name to load a source mask
    
    See Also:
    
    Constant Field Values
  - LOAD_SOURCE_AFFINE
```
public static final String LOAD_SOURCE_AFFINE
```
    bUnwarpJ_ method name to load an affine matrix to the source image
    
    See Also:
    
    Constant Field Values
- Constructor Detail
  - IODialog
```
public IODialog(Frame parentWindow,
                ij.ImagePlus sourceImp,
                ij.ImagePlus targetImp,
                PointHandler sourcePh,
                PointHandler targetPh,
                MainDialog dialog)
```
    Create a new instance of IODialog.
    
    Parameters:
    
    parentWindow - pointer to the parent window
    
    sourceImp - pointer to the source image representation
    
    targetImp - pointer to the target image representation
    
    sourcePh - point handler for the source image
    
    targetPh - point handler for the source image
    
    dialog - dialog for bUnwarpJ interface
- Method Detail
  - actionPerformed
```
public void actionPerformed(ActionEvent ae)
```
    Actions to be taking during the dialog.
    
    Specified by:
    
    actionPerformed in interface ActionListener
  - getInsets
```
public Insets getInsets()
```
    Get the insets.
    
    Overrides:
    
    getInsets in class Container
    
    Returns:
    
    new insets
  - record
```
public static void record(String command,
                          String... args)
```
    Macro-record a specific command. The command names match the static methods that reproduce that part of the code.
    
    Parameters:
    
    command - name of the command including package info
    
    args - set of arguments for the command

Class IODialog

Nested Class Summary

Nested classes/interfaces inherited from class java.awt.Dialog

Nested classes/interfaces inherited from class java.awt.Window

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Field Summary

Fields inherited from class java.awt.Dialog

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Constructor Summary

Method Summary

Methods inherited from class java.awt.Dialog

Methods inherited from class java.awt.Window

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Field Detail

EVALUATE_SIMILARITY

LOAD_LANDMARKS

SAVE_LANDMARKS

SHOW_LANDMARKS

LOAD_ELASTIC_TRANSF

LOAD_RAW_TRANSF

COMPARE_OPPOSITE_ELASTIC

COMPARE_ELASTIC_RAW

COMPARE_RAW

CONVERT_TO_RAW

CONVERT_TO_ELASTIC

COMPOSE_ELASTIC

COMPOSE_RAW

COMPOSE_RAW_ELASTIC

INVERT_RAW

ADAPT_COEFFICIENTS

LOAD_SOURCE_MASK

LOAD_SOURCE_AFFINE

Constructor Detail

IODialog

Method Detail

actionPerformed

getInsets

record