Uses of Interface
org.janelia.saalfeldlab.n5.universe.metadata.axes.AxisMetadata

Packages that use AxisMetadata

Package	Description
org.janelia.saalfeldlab.n5.universe.metadata
org.janelia.saalfeldlab.n5.universe.metadata.axes
org.janelia.saalfeldlab.n5.universe.metadata.axisTransforms
org.janelia.saalfeldlab.n5.universe.metadata.canonical
org.janelia.saalfeldlab.n5.universe.metadata.ome.ngff

Uses of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata

Classes in org.janelia.saalfeldlab.n5.universe.metadata that implement AxisMetadata

Modifier and Type	Class and Description
class	N5CosemMetadata Janelia COSEM's implementation of a N5SingleScaleMetadata.

Uses of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata.axes

Subinterfaces of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata.axes

Modifier and Type	Interface and Description
interface	IndexedAxisMetadata Metadata that labels and assigns types to axes.

Classes in org.janelia.saalfeldlab.n5.universe.metadata.axes that implement AxisMetadata

Modifier and Type	Class and Description
class	DefaultAxisMetadata Default implementation of AxisMetadata.
class	DefaultDatasetAxisMetadata Default implementation of AxisMetadata.
class	DefaultIndexedAxisMetadata Default implementation of IndexedAxisMetadata.
class	IndexedAxisListMetadata Default implementation of IndexedAxisMetadata.

Methods in org.janelia.saalfeldlab.n5.universe.metadata.axes with type parameters of type AxisMetadata

Modifier and Type	Method and Description
static <A extends AxisMetadata> int[]	AxisUtils.findImagePlusPermutation(AxisMetadata axisMetadata) Finds and returns a permutation p such that source[p[i]] equals target[i]
static <M extends AxisMetadata & N5Metadata> M	AxisUtils.permuteForImagePlus(int[] spatialPermutation, M meta)
static <T,M extends AxisMetadata & N5Metadata> net.imglib2.RandomAccessibleInterval<T>	AxisUtils.permuteForImagePlus(net.imglib2.RandomAccessibleInterval<T> img, M meta)
static <T,M extends N5Metadata,A extends AxisMetadata & N5Metadata> net.imglib2.util.Pair<net.imglib2.RandomAccessibleInterval<T>,M>	AxisUtils.permuteImageAndMetadataForImagePlus(int[] p, net.imglib2.RandomAccessibleInterval<T> img, M meta)
static <T,M extends N5Metadata,A extends AxisMetadata & N5Metadata> net.imglib2.util.Pair<net.imglib2.RandomAccessibleInterval<T>,M>	AxisUtils.permuteImageAndMetadataForImagePlus(net.imglib2.RandomAccessibleInterval<T> img, M meta)

Methods in org.janelia.saalfeldlab.n5.universe.metadata.axes with parameters of type AxisMetadata

Modifier and Type	Method and Description
static <A extends AxisMetadata> int[]	AxisUtils.findImagePlusPermutation(AxisMetadata axisMetadata) Finds and returns a permutation p such that source[p[i]] equals target[i]

Constructors in org.janelia.saalfeldlab.n5.universe.metadata.axes with parameters of type AxisMetadata

Constructor and Description
AxisSlicer(AxisMetadata axes)

Uses of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata.axisTransforms

Classes in org.janelia.saalfeldlab.n5.universe.metadata.axisTransforms that implement AxisMetadata

Modifier and Type	Class and Description
class	TransformAxes A transformation whose axes are labeled.

Uses of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata.canonical

Classes in org.janelia.saalfeldlab.n5.universe.metadata.canonical that implement AxisMetadata

Modifier and Type	Class and Description
class	CalibratedTransformMetadata
class	CanonicalSpatialDatasetMetadata
class	CanonicalSpatialMetadata
class	SpatialMetadataCanonical Interface for metadata describing how spatial data are oriented in physical space.

Uses of AxisMetadata in org.janelia.saalfeldlab.n5.universe.metadata.ome.ngff

Classes in org.janelia.saalfeldlab.n5.universe.metadata.ome.ngff that implement AxisMetadata

Modifier and Type	Class and Description
class	NgffSingleScaleAxesMetadata

Methods in org.janelia.saalfeldlab.n5.universe.metadata.ome.ngff with type parameters of type AxisMetadata

Modifier and Type	Method and Description
static <T,M extends AxisMetadata & N5Metadata> net.imglib2.RandomAccessibleInterval<T>	OmeNgffMetadata.permuteForNgff(net.imglib2.RandomAccessibleInterval<T> img, M meta)