public class LegacyMicroManagerImgLoader extends AbstractImgLoader
| Constructor and Description |
|---|
LegacyMicroManagerImgLoader(File mmFile,
AbstractSequenceDescription<? extends BasicViewSetup,? extends BasicViewDescription<?>,?> sequenceDescription) |
| Modifier and Type | Method and Description |
|---|---|
File |
getFile() |
RandomAccessibleInterval<FloatType> |
getFloatImage(ViewId view,
boolean normalize)
Get
FloatType image. |
RandomAccessibleInterval<UnsignedShortType> |
getImage(ViewId view)
Get the un-normalized image of the default
pixel
type of this BasicImgLoader. |
protected void |
loadMetaData(ViewId view)
Loads only the metadata from the image, should call updateMetaDataCache( ...
|
static <T extends RealType<T> & NativeType<T>> |
populateImage(ArrayImg<T,?> img,
BasicViewDescription<?> vd,
MultipageTiffReader r) |
String |
toString() |
getImageSize, getImageType, getVoxelSize, normalize, updateMetaDataCache, updateXMLMetaData, updateXMLMetaData, updateXMLMetaDatapublic LegacyMicroManagerImgLoader(File mmFile, AbstractSequenceDescription<? extends BasicViewSetup,? extends BasicViewDescription<?>,?> sequenceDescription)
public File getFile()
public static final <T extends RealType<T> & NativeType<T>> void populateImage(ArrayImg<T,?> img, BasicViewDescription<?> vd, MultipageTiffReader r)
public RandomAccessibleInterval<FloatType> getFloatImage(ViewId view, boolean normalize)
LegacyImgLoaderFloatType image. If requested, the image is normalized to the
range [0,1].view - timepoint and setup for which to retrieve the image.normalize - whether the image should be normalized to [0,1].FloatType imagepublic RandomAccessibleInterval<UnsignedShortType> getImage(ViewId view)
LegacyBasicImgLoaderpixel
type of this BasicImgLoader.view - timepoint and setup for which to retrieve the image.protected void loadMetaData(ViewId view)
AbstractImgLoaderloadMetaData in class AbstractImgLoaderCopyright © 2015–2021 Fiji. All rights reserved.