public class Open_MRC_Leginon
extends ij.ImagePlus
implements ij.plugin.PlugIn
changes, CLOSED, COLOR_256, COLOR_RGB, compositeImage, currentSlice, dimensionsSet, flattenTitle, GRAY16, GRAY32, GRAY8, height, img, ip, locked, nChannels, nFrames, nSlices, OPENED, roi, setIJMenuBar, UPDATED, width, winABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTHADD_TO_OVERLAY, ALL_STATS, AREA, AREA_FRACTION, CENTER_OF_MASS, CENTROID, CIRCULARITY, ELLIPSE, FERET, INTEGRATED_DENSITY, INVERT_Y, KURTOSIS, LABELS, LIMIT, MAX_STANDARDS, MEAN, MEDIAN, MIN_MAX, MODE, NaN_EMPTY_CELLS, PERIMETER, RECT, SCIENTIFIC_NOTATION, SHAPE_DESCRIPTORS, SKEWNESS, SLICE, STACK_POSITION, STD_DEV| Constructor and Description |
|---|
Open_MRC_Leginon() |
| Modifier and Type | Method and Description |
|---|---|
static ij.ImagePlus |
openRaw(int imageType,
String directory,
String fileName,
int width,
int height,
long offset,
int nImages,
int gapBetweenImages,
boolean intelByteOrder,
boolean whiteIsZero)
Copied and modified from ij.io.ImportDialog.
|
void |
run(String arg)
Expects path as argument, or will ask for it and then open the image.
|
addImageListener, clone, close, convertIndexToPosition, copy, copy, copyAttributes, copyScale, copyToSystem, createEmptyStack, createHyperStack, createImagePlus, createLut, createNewRoi, createRoiMask, createThresholdMask, crop, crop, crop, crop, cropAndSave, cut, deleteRoi, draw, draw, duplicate, flatten, flattenStack, flush, getAllStatistics, getBitDepth, getBufferedImage, getBytesPerPixel, getC, getCalibration, getCanvas, getChannel, getChannelProcessor, getClipboard, getCompositeMode, getCurrentSlice, getDefault16bitRange, getDimensions, getDimensions, getDisplayMode, getDisplayRangeMax, getDisplayRangeMin, getFileInfo, getFrame, getGlobalCalibration, getHeight, getHideOverlay, getID, getImage, getImageProperties, getImageStack, getImageStackSize, getInfoProperty, getLocalCalibration, getLocationAsString, getLuts, getMask, getNChannels, getNDimensions, getNFrames, getNSlices, getNumericProp, getNumericProperty, getOpenAsHyperStack, getOriginalFileInfo, getOverlay, getPixel, getPlot, getProcessor, getProp, getProperties, getPropertiesAsArray, getProperty, getPropsInfo, getRawStatistics, getRoi, getShortTitle, getSizeInBytes, getSlice, getStack, getStackIndex, getStackSize, getStartTime, getStaticGlobalCalibration, getStatistics, getStatistics, getStatistics, getStatistics, getStringProperty, getT, getTitle, getType, getWidth, getWindow, getZ, hide, imageUpdate, isComposite, isDisplayedHyperStack, isHyperStack, isInvertedLut, isLocked, isLockedByAnotherThread, isProcessor, isStack, isThreshold, isVisible, killRoi, killStack, lock, lockSilently, logImageListeners, mouseMoved, notifyListeners, okToDeleteRoi, paste, paste, plotHistogram, plotHistogram, removeImageListener, repaintWindow, resetClipboard, resetDisplayRange, resetStack, resize, resize, restoreRoi, revert, saveRoi, setActivated, setActiveChannels, setAntialiasRendering, setC, setCalibration, setColor, setDefault16bitRange, setDimensions, setDisplayMode, setDisplayRange, setDisplayRange, setFileInfo, setGlobalCalibration, setHideOverlay, setIgnoreFlush, setIgnoreGlobalCalibration, setIJMenuBar, setIJMenuBar, setImage, setImage, setLut, setOpenAsHyperStack, setOverlay, setOverlay, setOverlay, setPlot, setPosition, setPosition, setPositionWithoutUpdate, setProcessor, setProcessor, setProp, setProp, setProperties, setProperty, setRoi, setRoi, setRoi, setRoi, setSlice, setSliceWithoutUpdate, setStack, setStack, setStack, setT, setTitle, setType, setTypeToColor256, setWindow, setZ, show, show, startTiming, tempOverlay, toString, trimProcessor, unlock, updateAndDraw, updateAndRepaintWindow, updateChannelAndDraw, updateImage, updatePosition, updateStatusbarValue, updateVirtualSlicepublic void run(String arg)
run in interface ij.plugin.PlugInpublic static ij.ImagePlus openRaw(int imageType,
String directory,
String fileName,
int width,
int height,
long offset,
int nImages,
int gapBetweenImages,
boolean intelByteOrder,
boolean whiteIsZero)
Copyright © 2015–2021 Fiji. All rights reserved.