Package | Description |
---|---|
sc.fiji.coloc | |
sc.fiji.coloc.algorithms | |
sc.fiji.coloc.results |
Modifier and Type | Method and Description |
---|---|
AnalysisResults<T> |
Coloc_2.colocalise(Img<T> image1,
Img<T> image2,
Coloc_2.BoundingBox roi,
Img<T> mask,
List<ResultHandler<T>> extraHandlers)
Call this method to run a whole colocalisation configuration, all selected
algorithms get run on the supplied images.
|
Modifier and Type | Method and Description |
---|---|
void |
SpearmanRankCorrelation.processResults(ResultHandler<T> handler) |
void |
PearsonsCorrelation.processResults(ResultHandler<T> handler) |
void |
MandersColocalization.processResults(ResultHandler<T> handler) |
void |
LiICQ.processResults(ResultHandler<T> handler) |
void |
KendallTauRankCorrelation.processResults(ResultHandler<T> handler) |
void |
InputCheck.processResults(ResultHandler<T> handler) |
void |
Histogram2D.processResults(ResultHandler<T> handler) |
void |
CostesSignificanceTest.processResults(ResultHandler<T> handler) |
void |
AutoThresholdRegression.processResults(ResultHandler<T> handler) |
void |
Algorithm.processResults(ResultHandler<T> handler)
A method to give the algorithm the opportunity to let
its results being processed by the passed handler.
|
Modifier and Type | Class and Description |
---|---|
class |
AnalysisResults<T extends RealType<T>>
Data structure housing all colocalisation results.
|
class |
EasyDisplay<T extends RealType<T>> |
class |
PDFWriter<T extends RealType<T>> |
class |
SingleWindowDisplay<T extends RealType<T>>
This class displays the container contents in one single window and offers
features like the use of different LUTs.
|
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