| Modifier and Type | Method and Description |
|---|---|
AbstractAffineModel3D<?> |
BigWarpTransform.getModel3D() |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractAffineModel3D<M extends AbstractAffineModel3D<M>> |
| Modifier and Type | Class and Description |
|---|---|
class |
AffineModel3D
3d-affine transformation models to be applied to points in 3d-space.
|
class |
RigidModel3D |
class |
SimilarityModel3D
3d-rigid transformation models to be applied to points in 3d-space.
|
class |
TranslationModel3D |
| Modifier and Type | Method and Description |
|---|---|
AbstractAffineModel3D |
SPIMConfiguration.getModel() |
| Modifier and Type | Class and Description |
|---|---|
class |
TileSPIM<M extends AbstractAffineModel3D<M>> |
| Modifier and Type | Method and Description |
|---|---|
static void |
Java3d.applyInPlace(AbstractAffineModel3D<?> m,
Point3d p) |
static void |
Java3d.applyInPlace(AbstractAffineModel3D<?> m,
Point3d p,
double[] tmp) |
static void |
Java3d.applyInverseInPlace(AbstractAffineModel3D<?> m,
Point3d p) |
static void |
Java3d.applyInverseInPlace(AbstractAffineModel3D<?> m,
Point3d p,
double[] tmp) |
| Modifier and Type | Method and Description |
|---|---|
protected static Image<FloatType> |
ExtractPSF.transformPSF(Image<FloatType> psf,
AbstractAffineModel3D<?> model)
Transforms the extracted PSF using the affine transformation of the corresponding view
|
| Modifier and Type | Method and Description |
|---|---|
static <M extends AbstractAffineModel3D<M>> |
ViewStructure.initViewStructure(SPIMConfiguration conf,
int timePointIndex,
M model,
String id,
int debugLevel)
This static methods creates an instance of
ViewStructure with all ViewDataBeads completely instantiated. |
| Modifier and Type | Method and Description |
|---|---|
AbstractAffineModel3D<?> |
ViewDataBeads.getUninitializedModel() |
| Modifier and Type | Method and Description |
|---|---|
static void |
BeadRegistration.concatenateAxialScaling(AbstractAffineModel3D model,
double zStretching) |
| Modifier and Type | Field and Description |
|---|---|
AbstractAffineModel3D<?> |
NucleiConfiguration.globalModel |
AbstractAffineModel3D<?> |
NucleiConfiguration.icpModel |
AbstractAffineModel3D<?> |
NucleiConfiguration.ransacModel |
| Modifier and Type | Method and Description |
|---|---|
static <M extends AbstractAffineModel3D<M>> |
TransformUtils.getTransform3D(M model) |
| Modifier and Type | Method and Description |
|---|---|
static Transform3D |
TransformUtils.getTransform3D1(AbstractAffineModel3D<?> model) |
| Modifier and Type | Method and Description |
|---|---|
static <M extends AbstractAffineModel3D<M>> |
GlobalOpt.getTransform3D(M model) |
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