Stitch_Many_Images (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- Stitch_Many_Images

All Implemented Interfaces:: ij.plugin.PlugIn

public class Stitch_Many_Images
extends Object
implements ij.plugin.PlugIn

Nested Class Summary

Nested Classes
Modifier and Type Class and Description

protected class Stitch_Many_Images.IntroItemListener
Makes sure that only one item is selected at a time

Nested Classes
Modifier and Type	Class and Description
`protected class`	`Stitch_Many_Images.IntroItemListener` Makes sure that only one item is selected at a time

Field Summary

Fields
Modifier and Type	Field and Description
`static double`	`alphaStatic`
`static boolean`	`computeOverlapStatic`
`static String`	`fileNameStatic` Static variables for the individual dialogs
`static String`	`fusionMethodStatic`
`static String`	`handleRGBStatic`
`static boolean`	`previewOnlyStatic`
`static String`	`rgbOrderStatic`
`static int`	`stitchingType`
`static double`	`thresholdDisplacementAbsoluteStatic`
`static double`	`thresholdDisplacementRelativeStatic`
`static double`	`thresholdRStatic`

Constructor Summary

Constructors
Constructor and Description

Stitch_Many_Images()

Constructors
Constructor and Description
`Stitch_Many_Images()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`run(String arg0)`
`protected void`	`runStitching()` Calls the Stitching with the parameters provided
`void`	`stitchCollection()` Manages the dialog for stitching a collection of images defined by a Tileconfiguration file
`void`	`stitchDirectory()` Manages the dialog for stitching all files in a directory with unknown configuration
`void`	`stitchGrid()` Manages the dialog for stitching a grid of images
`void`	`stitchMultiSeriesFile()` Manages the dialog for stitching all tiles in a multi-series file

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - stitchingType
```
public static int stitchingType
```
  - fileNameStatic
```
public static String fileNameStatic
```
    Static variables for the individual dialogs
  - computeOverlapStatic
```
public static boolean computeOverlapStatic
```
  - handleRGBStatic
```
public static String handleRGBStatic
```
  - rgbOrderStatic
```
public static String rgbOrderStatic
```
  - fusionMethodStatic
```
public static String fusionMethodStatic
```
  - alphaStatic
```
public static double alphaStatic
```
  - thresholdRStatic
```
public static double thresholdRStatic
```
  - thresholdDisplacementRelativeStatic
```
public static double thresholdDisplacementRelativeStatic
```
  - thresholdDisplacementAbsoluteStatic
```
public static double thresholdDisplacementAbsoluteStatic
```
  - previewOnlyStatic
```
public static boolean previewOnlyStatic
```
- Constructor Detail
  - Stitch_Many_Images
```
public Stitch_Many_Images()
```
- Method Detail
  - run
```
public void run(String arg0)
```
    Specified by:
    
    run in interface ij.plugin.PlugIn
  - stitchGrid
```
public void stitchGrid()
```
    Manages the dialog for stitching a grid of images
  - stitchDirectory
```
public void stitchDirectory()
```
    Manages the dialog for stitching all files in a directory with unknown configuration
  - stitchMultiSeriesFile
```
public void stitchMultiSeriesFile()
```
    Manages the dialog for stitching all tiles in a multi-series file
  - stitchCollection
```
public void stitchCollection()
```
    Manages the dialog for stitching a collection of images defined by a Tileconfiguration file
  - runStitching
```
protected void runStitching()
```
    Calls the Stitching with the parameters provided

Class Stitch_Many_Images

Nested Class Summary

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

stitchingType

fileNameStatic

computeOverlapStatic

handleRGBStatic

rgbOrderStatic

fusionMethodStatic

alphaStatic

thresholdRStatic

thresholdDisplacementRelativeStatic

thresholdDisplacementAbsoluteStatic

previewOnlyStatic

Constructor Detail

Stitch_Many_Images

Method Detail

run

stitchGrid

stitchDirectory

stitchMultiSeriesFile

stitchCollection

runStitching