Uses of Interface
mpicbg.imglib.algorithm.Algorithm

Packages that use Algorithm

Package	Description
mpicbg.imglib.algorithm
mpicbg.imglib.algorithm.correlation
mpicbg.imglib.algorithm.extremafinder
mpicbg.imglib.algorithm.fft
mpicbg.imglib.algorithm.floydsteinberg
mpicbg.imglib.algorithm.gauss
mpicbg.imglib.algorithm.histogram
mpicbg.imglib.algorithm.integral
mpicbg.imglib.algorithm.labeling
mpicbg.imglib.algorithm.math
mpicbg.imglib.algorithm.mirror
mpicbg.imglib.algorithm.pde
mpicbg.imglib.algorithm.projection
mpicbg.imglib.algorithm.roi
mpicbg.imglib.algorithm.scalespace
mpicbg.imglib.algorithm.transformation
script.imglib.algorithm

Uses of Algorithm in mpicbg.imglib.algorithm

Subinterfaces of Algorithm in mpicbg.imglib.algorithm

Modifier and Type	Interface and Description
interface	OutputAlgorithm<T extends Type<T>> TODO

Classes in mpicbg.imglib.algorithm that implement Algorithm

Modifier and Type	Class and Description
class	BenchmarkAlgorithm This is a convenience implementation of an algorithm that implements Benchmark and Algorithm so that less code has to be re-implemented.
class	CanvasImage<T extends Type<T>> TODO
class	MultiThreadedAlgorithm This is a convenience implementation of an algorithm that implements MultiThreaded and Algorithm so that less code has to be re-implemented.
class	MultiThreadedBenchmarkAlgorithm This is a convenience implementation of an algorithm that implements MultiThreaded, Benchmark and Algorithm so that less code has to be re-implemented.
class	ROIAlgorithm<T extends RealType<T>,S extends RealType<S>> ROIAlgorithm implements a framework against which to build operations of one image against another, like convolution, cross-correlation, or morphological operations.

Uses of Algorithm in mpicbg.imglib.algorithm.correlation

Classes in mpicbg.imglib.algorithm.correlation that implement Algorithm

Modifier and Type	Class and Description
class	CrossCorrelation<S extends RealType<S>,T extends RealType<T>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.extremafinder

Subinterfaces of Algorithm in mpicbg.imglib.algorithm.extremafinder

Modifier and Type	Interface and Description
interface	RegionalExtremaFinder<T extends RealType<T>> Provides a quick algorithm for finding regional maxima in 2- or 3-dimensional images.

Classes in mpicbg.imglib.algorithm.extremafinder that implement Algorithm

Modifier and Type	Class and Description
class	AbstractRegionalExtremaFinder<T extends RealType<T>> TODO
class	RegionalExtremaFinder2D<T extends RealType<T>> *
class	RegionalExtremaFinder3D<T extends RealType<T>> This class finds the regional extrema of a 3 dimensional image.

Uses of Algorithm in mpicbg.imglib.algorithm.fft

Classes in mpicbg.imglib.algorithm.fft that implement Algorithm

Modifier and Type	Class and Description
class	Bandpass<T extends NumericType<T>> TODO
class	FourierConvolution<T extends RealType<T>,S extends RealType<S>> TODO
class	FourierTransform<T extends RealType<T>,S extends ComplexType<S>> TODO
class	InverseFourierConvolution<T extends RealType<T>,S extends RealType<S>> Convolve an image with the inverse of a kernel which is division in the Fourier domain.
class	InverseFourierTransform<T extends RealType<T>,S extends ComplexType<S>> TODO
class	PhaseCorrelation<T extends RealType<T>,S extends RealType<S>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.floydsteinberg

Classes in mpicbg.imglib.algorithm.floydsteinberg that implement Algorithm

Modifier and Type	Class and Description
class	FloydSteinbergDithering<T extends RealType<T>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.gauss

Classes in mpicbg.imglib.algorithm.gauss that implement Algorithm

Modifier and Type	Class and Description
class	DownSample<T extends RealType<T>> TODO
class	GaussianConvolution<T extends NumericType<T>> TODO
class	GaussianConvolution2<A extends Type<A>,B extends NumericType<B>> TODO
class	GaussianConvolution3<A extends Type<A>,B extends NumericType<B>,C extends Type<C>> Computes a Gaussian Convolution on any Type(A) for which is defined how to convert it into a NumericType(B) on which the convolution is performed and back to the desired output Type(C).
class	GaussianConvolution4<A extends Type<A>,B extends ExponentialMathType<B>,C extends Type<C>> TODO
class	GaussianConvolutionReal<T extends RealType<T>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.histogram

Classes in mpicbg.imglib.algorithm.histogram that implement Algorithm

Modifier and Type	Class and Description
class	Histogram<T extends Type<T>> Implements a Histogram over an Image.

Uses of Algorithm in mpicbg.imglib.algorithm.integral

Classes in mpicbg.imglib.algorithm.integral that implement Algorithm

Modifier and Type	Class and Description
class	IntegralImage<R extends NumericType<R>,T extends NumericType<T>> n-dimensional integral image that stores sums using type .
class	IntegralImageDouble<R extends NumericType<R>> Special implementation for double using the basic type to sum up the individual lines.
class	IntegralImageLong<R extends NumericType<R>> Special implementation for long using the basic type to sum up the individual lines.
class	ScaleAreaAveraging2d<T extends RealType<T>,R extends RealType<R>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.labeling

Classes in mpicbg.imglib.algorithm.labeling that implement Algorithm

Modifier and Type	Class and Description
class	BinaryInterpolation2D Given two binary images of the same dimensions, generate an interpolated image that sits somewhere in between, as specified by the weight.
class	GradientWatershed<T extends RealType<T>,L extends Comparable<L>> This class labels an image where the objects in question have edges that are defined by sharp intensity gradients and have centers of high intensity and a low intensity background.

Uses of Algorithm in mpicbg.imglib.algorithm.math

Classes in mpicbg.imglib.algorithm.math that implement Algorithm

Modifier and Type	Class and Description
class	ComputeMinMax<T extends Type<T> & Comparable<T>> TODO
class	ImageCalculator<S extends Type<S>,T extends Type<T>,U extends Type<U>> TODO
class	ImageCalculatorInPlace<S extends Type<S>,T extends Type<T>> TODO
class	ImageConverter<S extends Type<S>,T extends Type<T>> TODO
class	NormalizeImageFloat<T extends RealType<T>> Normalizes a given Image so that the sum of all of its pixels is equal to one (or approximately so).
class	NormalizeImageMinMax<T extends RealType<T>> TODO
class	PickImagePeaks<T extends RealType<T>> This class implements a very simple peak-picker, with optional ellipsoidal peak suppression.

Uses of Algorithm in mpicbg.imglib.algorithm.mirror

Classes in mpicbg.imglib.algorithm.mirror that implement Algorithm

Modifier and Type	Class and Description
class	MirrorImage<T extends Type<T>> Mirrors an n-dimensional image along an axis (one of the dimensions).

Uses of Algorithm in mpicbg.imglib.algorithm.pde

Classes in mpicbg.imglib.algorithm.pde that implement Algorithm

Modifier and Type	Class and Description
class	AnisotropicDiffusion<T extends RealType<T>> Perona & Malik Anisotropic diffusion

Uses of Algorithm in mpicbg.imglib.algorithm.projection

Classes in mpicbg.imglib.algorithm.projection that implement Algorithm

Modifier and Type	Class and Description
class	MaxProjection<T extends Comparable<T> & Type<T>> Computes a maximum projection along an arbitrary dimension, if the image in 1-dimensional it will return an Image of size 1 with the max value

Uses of Algorithm in mpicbg.imglib.algorithm.roi

Classes in mpicbg.imglib.algorithm.roi that implement Algorithm

Modifier and Type	Class and Description
class	DirectConvolution<T extends RealType<T>,R extends RealType<R>,S extends RealType<S>> DirectConvolution is an ROIAlgorithm designed to do both convolution and cross-correlation by operating on the image and kernel directly, rather than by using such time-saving tricks as FFT.
class	DirectCrossCorr<T extends RealType<T>,R extends RealType<R>,S extends RealType<S>> DirectCrossCorr performs direct cross-correlation of a kernel against an image.
class	MedianFilter<T extends RealType<T>> Median filter / morphological operation.
class	MorphClose<T extends RealType<T>> Close morphological operation.
class	MorphDilate<T extends RealType<T>> Dilation morphological operation.
class	MorphErode<T extends RealType<T>> Erosion morphological operation.
class	MorphOpen<T extends RealType<T>> Open morphological operation.
class	StatisticalOperation<T extends RealType<T>> StatisticalOperation provides the framework to create Order Statistic operations.

Uses of Algorithm in mpicbg.imglib.algorithm.scalespace

Classes in mpicbg.imglib.algorithm.scalespace that implement Algorithm

Modifier and Type	Class and Description
class	AdaptiveNonMaximalSuppression<T extends RealType<T>> TODO
class	DifferenceOfGaussian<A extends Type<A>,B extends NumericType<B> & Comparable<B>> TODO
class	DifferenceOfGaussianReal<A extends RealType<A>,B extends RealType<B>> TODO
class	DifferenceOfGaussianReal1<A extends RealType<A>> TODO
class	ScaleSpace<A extends Type<A>,B extends RealType<B>> TODO
class	SubpixelLocalization<T extends RealType<T>> TODO

Uses of Algorithm in mpicbg.imglib.algorithm.transformation

Classes in mpicbg.imglib.algorithm.transformation that implement Algorithm

Modifier and Type	Class and Description
class	HoughLineTransform<S extends RealType<S>,T extends Type<T> & Comparable<T>> A class that extends HoughTransform to handle Hough Line voting over an edge map.
class	HoughTransform<S extends RealType<S>,T extends Type<T> & Comparable<T>> This abstract class provides some basic functionality for use with arbitrary Hough-like transforms.
class	ImageTransform<T extends Type<T>> TODO

Uses of Algorithm in script.imglib.algorithm

Constructor parameters in script.imglib.algorithm with type arguments of type Algorithm

Constructor and Description
Process(Class<Algorithm> algorithmClass, IFunction fn, Object... parameters) Same as this(algorithmClass, Process.asImage(fn), parameters);
Process(Class<Algorithm> algorithmClass, Image<? extends RealType<?>> img, Object... parameters) Initialize and execute the given Algorithm and prepare a cursor to deliver its pixel values one by one in successive calls to eval().