mpicbg.imglib.algorithm.correlation

Class CrossCorrelation<S extends RealType<S>,T extends RealType<T>>

java.lang.Object

mpicbg.imglib.algorithm.correlation.CrossCorrelation<S,T>

All Implemented Interfaces:

Algorithm, MultiThreaded

public class CrossCorrelation<S extends RealType<S>,T extends RealType<T>>
extends Object
implements Algorithm, MultiThreaded

TODO

Constructor Summary

Constructors

Constructor and Description
CrossCorrelation(Image<S> image1, Image<T> image2)

Method Summary

Modifier and Type	Method and Description
boolean	checkInput()
protected double	computeAdvancedSum(double avg1, double avg2)
protected <R extends RealType<R>> double	computeAvg(Image<R> image)
protected double	computeSimple(double avg1, double avg2)
static <S extends RealType<S>,T extends RealType<T>> double	correlate(Image<S> img1, Image<T> img2)
String	getErrorMessage()
int	getNumThreads() The number of threads used by the algorithm
double	getR()
boolean	process()
void	setNumThreads() Sets the number of threads to the amount of processors available
void	setNumThreads(int numThreads) Sets the number of threads

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CrossCorrelation

public CrossCorrelation(Image<S> image1,
                        Image<T> image2)

Method Detail

correlate

public static <S extends RealType<S>,T extends RealType<T>> double correlate(Image<S> img1,
                                                                             Image<T> img2)

getR

public double getR()

checkInput

public boolean checkInput()

Specified by:

checkInput in interface Algorithm

process

public boolean process()

Specified by:

process in interface Algorithm

computeAvg

protected <R extends RealType<R>> double computeAvg(Image<R> image)

computeSimple

protected double computeSimple(double avg1,
                               double avg2)

computeAdvancedSum

protected double computeAdvancedSum(double avg1,
                                    double avg2)

getErrorMessage

public String getErrorMessage()

Specified by:

getErrorMessage in interface Algorithm

setNumThreads

public void setNumThreads()

Description copied from interface: MultiThreaded

Sets the number of threads to the amount of processors available

Specified by:

setNumThreads in interface MultiThreaded

setNumThreads

public void setNumThreads(int numThreads)

Description copied from interface: MultiThreaded

Sets the number of threads

Specified by:

setNumThreads in interface MultiThreaded

Parameters:

numThreads - - number of threads to use

getNumThreads

public int getNumThreads()

Description copied from interface: MultiThreaded

The number of threads used by the algorithm

Specified by:

getNumThreads in interface MultiThreaded

Returns:

- the number of threads