Package net.preibisch.mvrecon.process.pointcloud.pointdescriptor.model

Class TranslationInvariantAffineModel3D

java.lang.Object

mpicbg.models.AbstractModel<TranslationInvariantAffineModel3D>

net.preibisch.mvrecon.process.pointcloud.pointdescriptor.model.TranslationInvariantModel<TranslationInvariantAffineModel3D>

net.preibisch.mvrecon.process.pointcloud.pointdescriptor.model.TranslationInvariantAffineModel3D

All Implemented Interfaces:

Serializable, mpicbg.models.CoordinateTransform, mpicbg.models.Model<TranslationInvariantAffineModel3D>

public class TranslationInvariantAffineModel3D
extends TranslationInvariantModel<TranslationInvariantAffineModel3D>

3d-affine transformation models to be applied to points in 3d-space. This model includes the closed form weighted least squares solution as described by \citet{SchaeferAl06} transferred to 3d Changed by Stephan Preibisch to be translation invariant for descriptor matching BibTeX:

 @article{SchaeferAl06,
   author    = {Scott Schaefer and Travis McPhail and Joe Warren},
   title     = {Image deformation using moving least squares},
   journal   = {ACM Transactions on Graphics},
   volume    = {25},
   number    = {3},
   year      = {2006},
   pages     = {533--540},
   publisher = {ACM},
   address   = {New York, NY, USA},
   url       = {http://faculty.cs.tamu.edu/schaefer/research/mls.pdf},
 }
 

Version:

0.1b

Author:

Stephan Saalfeld >saalfeld@mpi-cbg.de< and Johannes Schindelin and Stephan Preibisch

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected double	m00
protected double	m01
protected double	m02
protected double	m10
protected double	m11
protected double	m12
protected double	m20
protected double	m21
protected double	m22
protected static final int	MIN_NUM_MATCHES

Fields inherited from class mpicbg.models.AbstractModel

cost, rnd

Constructor Summary

Constructors

Constructor	Description
TranslationInvariantAffineModel3D()

Method Summary

Modifier and Type	Method	Description
final double[]	apply(double[] l)
final void	applyInPlace(double[] l)
boolean	canDoNumDimension(int numDimensions)	The TranslationInvariantModel can tell which dimensions it supports.
TranslationInvariantAffineModel3D	copy()
final <P extends mpicbg.models.PointMatch> void	fit(Collection<P> matches)
final int	getMinNumMatches()
final void	set(TranslationInvariantAffineModel3D m)
final String	toString()

Methods inherited from class mpicbg.models.AbstractModel

betterThan, filter, filter, filter, filterRansac, filterRansac, filterRansac, filterRansac, fit, fit, getCost, icp, localSmoothnessFilter, ransac, ransac, setCost, test, test

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

MIN_NUM_MATCHES

protected static final int MIN_NUM_MATCHES

See Also:

• Constant Field Values

m00

protected double m00

m01

protected double m01

m02

protected double m02

m10

protected double m10

m11

protected double m11

m12

protected double m12

m20

protected double m20

m21

protected double m21

m22

protected double m22

Constructor Details

TranslationInvariantAffineModel3D

public TranslationInvariantAffineModel3D()

Method Details

canDoNumDimension

public boolean canDoNumDimension(int numDimensions)

Description copied from class: TranslationInvariantModel

The TranslationInvariantModel can tell which dimensions it supports.

Specified by:

canDoNumDimension in class TranslationInvariantModel<TranslationInvariantAffineModel3D>

Parameters:

numDimensions - - The dimensionality (e.g. 3 means 3-dimensional)

Returns:

- If the TranslationInvariantModel supports that dimensionality

fit

public final <P extends mpicbg.models.PointMatch>
void fit(Collection<P> matches)
  throws mpicbg.models.NotEnoughDataPointsException,
mpicbg.models.IllDefinedDataPointsException

Throws:

mpicbg.models.NotEnoughDataPointsException

mpicbg.models.IllDefinedDataPointsException

set

public final void set(TranslationInvariantAffineModel3D m)

copy

public TranslationInvariantAffineModel3D copy()

getMinNumMatches

public final int getMinNumMatches()

apply

public final double[] apply(double[] l)

applyInPlace

public final void applyInPlace(double[] l)

toString

public final String toString()

Overrides:

toString in class Object