| Package | Description |
|---|---|
| io.scif.formats |
Provides
Format implementations for all file formats that are
supported by default in SCIFIO. |
| io.scif.formats.qt |
| Modifier and Type | Class and Description |
|---|---|
class |
APNGFormat
|
class |
AVIFormat
AVIReader is the file format reader for AVI files.
|
class |
BMPFormat
BMPReader is the file format reader for
Microsoft Bitmap
(BMP) files.
|
class |
DICOMFormat
DICOMReader is the file format reader for DICOM files.
|
class |
EPSFormat
Reader is the file format reader for Encapsulated PostScript (EPS) files.
|
class |
FITSFormat
FitsReader is the file format reader for Flexible Image Transport System
(FITS) images.
|
class |
GIFFormat
Handler for the GIF file format.
|
class |
ICSFormat
SCIFIO Format supporting the
ICS image
format.
|
class |
ImageIOFormat
ImageIOReader is the superclass for file format readers that use the
javax.imageio package.
|
class |
JPEG2000Format
JPEG2000Reader is the file format reader for JPEG-2000 images.
|
class |
JPEGFormat
JPEGReader is the file format reader for JPEG images.
|
class |
JPEGTileFormat
Reader for decoding JPEG images using java.awt.Toolkit.
|
class |
KontronFormat
The file format reader for Kontron IMG files
Kontron IMG files are generated by a Kontron controller computer attached to
Alan Boyde's Zeiss DSM 962 scanning electron microscope.
|
class |
MicromanagerFormat
MicromanagerReader is the file format reader for Micro-Manager files.
|
class |
MinimalTIFFFormat
MinimalTiffReader is the superclass for file format readers compatible with
or derived from the TIFF 6.0 file format.
|
class |
MNGFormat
A handler for the Multiple-image Network Graphics (MNG) file format.
|
class |
NRRDFormat
File format reader for NRRD files; see http://teem.sourceforge.net/nrrd.
|
class |
PCXFormat
PCXReader is the file format reader for PCX files (originally used by PC
Paintbrush; now used in Zeiss' LSM Image Browser).
|
class |
PGMFormat
Handler plugin for the PGM file format.
|
class |
ScancoISQFormat
The file format reader for Scanco ISQ files
ISQ images are generated by Scanco X-ray microtomography scanners
Scanco ISQ Header Information:
Scanco uses OpenVMS on Alpha workstations
Little endian byte order (the least significant bit occupies the lowest
memory position)
BYTE
00 char check[16]; // CTDATA-HEADER_V1
16 int data_type;
20 int nr_of_bytes;
24 int nr_of_blocks;
28 int patient_index;
32 int scanner_id;
36 int creation_date[2];
44 int dimx_p;
48 int dimy_p;
52 int dimz_p;
56 int dimx_µm;
60 int dimy_µm;
64 int dimz_µm;
68 int slice_thickness_µm;
72 int slice_increment_µm;
76 int slice_1_pos_µm;
80 int min_data_value;
84 int max_data_value;
88 int mu_scaling;
92 int nr_of_samples;
96 int nr_of_projections;
100 int scandist_µm;
104 int scanner_type;
108 int sampletime_µs;
112 int index_measurement;
116 int site;
120 int reference_line_µm;
124 int recon_alg;
128 char name[40];
168 int energy; // V
172 int intensity; // µA
...
508 int data_offset; // Number of optional header blocks
|
class |
StratecPQCTFormat
The file format reader for Stratec pQCT files.
|
class |
TestImgFormat
TestImgFormat is the file format reader for creatign test input data.
|
class |
TIFFFormat
Handler for the TIFF file format.
|
class |
TIFFJAIFormat
TiffJAIReader is a file format reader for TIFF images.
|
| Modifier and Type | Class and Description |
|---|---|
class |
LegacyQTFormat
LegacyQTReader is a file format reader for QuickTime movie files.
|
class |
NativeQTFormat
NativeQTReader is the file format reader for QuickTime movie files.
|
class |
PICTFormat
PictReader is the file format reader for Apple PICT files.
|
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