inra.ijpb.plugins

Class AnalyzeMicrostructure3D

java.lang.Object

inra.ijpb.plugins.AnalyzeMicrostructure3D

All Implemented Interfaces:

ij.plugin.PlugIn

public class AnalyzeMicrostructure3D
extends Object
implements ij.plugin.PlugIn

Plugin for computing densities of 3D intrinsic volumes (volume, surface area, mean breadth and Euler number) from 3D binary images.

Author:

dlegland

See Also:

AnalyzeRegions3D, IntrinsicVolumes3D

Constructor Summary

Constructors

Constructor and Description
AnalyzeMicrostructure3D()

Method Summary

Modifier and Type	Method and Description
ij.measure.ResultsTable	process(ij.ImagePlus imagePlus) Computes features from an ImagePlus object.
ij.measure.ResultsTable	process(ij.ImageStack image, ij.measure.Calibration calib) Computes features from an ImageStack object, specifying the calibration.
void	run(String arg)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AnalyzeMicrostructure3D

public AnalyzeMicrostructure3D()

Method Detail

run

public void run(String arg)

Specified by:

run in interface ij.plugin.PlugIn

process

public ij.measure.ResultsTable process(ij.ImagePlus imagePlus)

Computes features from an ImagePlus object. Spatial resolution is read from image Calibration.

Parameters:

imagePlus - the label image to analyze

Returns:

the results in a new ResultsTable

process

public ij.measure.ResultsTable process(ij.ImageStack image,
                                       ij.measure.Calibration calib)

Computes features from an ImageStack object, specifying the calibration.

Parameters:

image - the 3D label image to analyze

calib - the spatial calibration of the image

Returns:

the results in a new ResultsTable