public class Centroid3D extends RegionAnalyzer3D<Point3D>
Constructor and Description |
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Centroid3D()
Default constructor
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Modifier and Type | Method and Description |
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Point3D[] |
analyzeRegions(ij.ImageStack image,
int[] labels,
ij.measure.Calibration calib)
Computes centroid of each region in input label image.
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static double[][] |
centroids(ij.ImageStack labelImage,
int[] labels)
Computes centroid of each label in input image and returns the result as
an array of double for each label.
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static Point3D[] |
centroids(ij.ImageStack labelImage,
int[] labels,
ij.measure.Calibration calib)
Compute centroid of each region in input 3D label image and returns the
result as an array of Point3D.
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ij.measure.ResultsTable |
createTable(Map<Integer,Point3D> map)
Utility method that transforms the mapping between labels and Point3D
instances into a ResultsTable that can be displayed with ImageJ.
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algoProgressChanged, algoStatusChanged, analyzeRegions, analyzeRegions, computeTable, createMap
addAlgoListener, fireProgressChanged, fireProgressChanged, fireStatusChanged, fireStatusChanged, removeAlgoListener
public static final Point3D[] centroids(ij.ImageStack labelImage, int[] labels, ij.measure.Calibration calib)
labelImage
- the input image containing region labelslabels
- the array of unique labels in imagecalib
- the calibration of the imagepublic static final double[][] centroids(ij.ImageStack labelImage, int[] labels)
labelImage
- the input image containing label of particleslabels
- the array of unique labels in image the number of directions
to process, either 2 or 4public ij.measure.ResultsTable createTable(Map<Integer,Point3D> map)
map
- the mapping between labels and Point3Dspublic Point3D[] analyzeRegions(ij.ImageStack image, int[] labels, ij.measure.Calibration calib)
analyzeRegions
in class RegionAnalyzer3D<Point3D>
image
- the input image containing label of particleslabels
- the array of labels within the imagecalib
- the calibration of the imageCopyright © 2014–2023 INRA-IJPB Modeling and Digital Imaging lab. All rights reserved.