inra.ijpb.measure.region2d

Class BoundingBox

java.lang.Object

inra.ijpb.algo.AlgoStub

inra.ijpb.measure.region2d.RegionAnalyzer2D<Box2D>

inra.ijpb.measure.region2d.BoundingBox

All Implemented Interfaces:

Algo, RegionAnalyzer<Box2D>

public class BoundingBox
extends RegionAnalyzer2D<Box2D>

Compute bounding box of each region within a label or binary image.

Author:

dlegland

Constructor Summary

Constructors

Constructor and Description
BoundingBox() Default constructor

Method Summary

Modifier and Type	Method and Description
Box2D[]	analyzeRegions(ij.process.ImageProcessor image, int[] labels, ij.measure.Calibration calib) Computes bounding box of each region in input label image.
static Box2D[]	boundingBoxes(ij.process.ImageProcessor labelImage, int[] labels, ij.measure.Calibration calib) Compute bounding box of each region in input image and returns the result as an array of Box2D for each label.
ij.measure.ResultsTable	createTable(Map<Integer,Box2D> map) Utility method that transforms the mapping between labels and bounding boxes instances into a ResultsTable that can be displayed with ImageJ.

Methods inherited from class inra.ijpb.measure.region2d.RegionAnalyzer2D

analyzeRegions, analyzeRegions, computeTable

Methods inherited from class inra.ijpb.algo.AlgoStub

addAlgoListener, fireProgressChanged, fireProgressChanged, fireStatusChanged, fireStatusChanged, removeAlgoListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BoundingBox

public BoundingBox()

Default constructor

Method Detail

boundingBoxes

public static final Box2D[] boundingBoxes(ij.process.ImageProcessor labelImage,
                                          int[] labels,
                                          ij.measure.Calibration calib)

Compute bounding box of each region in input image and returns the result as an array of Box2D for each label.

Parameters:

labelImage - the input image containing label of region

labels - an array of unique labels in image

calib - the calibration of the image

Returns:

an array containing the bounding boxes of each region

analyzeRegions

public Box2D[] analyzeRegions(ij.process.ImageProcessor image,
                              int[] labels,
                              ij.measure.Calibration calib)

Computes bounding box of each region in input label image.

Specified by:

analyzeRegions in class RegionAnalyzer2D<Box2D>

Parameters:

image - the input image containing label of particles

labels - the array of labels within the image

calib - the calibration of the image

Returns:

an array of Box2D representing the calibrated coordinates of the bounding box of each region

createTable

public ij.measure.ResultsTable createTable(Map<Integer,Box2D> map)

Utility method that transforms the mapping between labels and bounding boxes instances into a ResultsTable that can be displayed with ImageJ.

Parameters:

map - the mapping between labels and bounding Boxes

Returns:

a ResultsTable that can be displayed with ImageJ.