Uses of Package
org.micromanager.data

Packages that use org.micromanager.data

Package	Description
org.micromanager	MMStudio application and Java API
org.micromanager.acquisition	This package contains classes for acquiring data and accessing Micro- Manager's Acquisition Engine.
org.micromanager.data	This package contains classes related to the storage and internal representation of image data and metadata.
org.micromanager.display	This package contains classes related to Micro-Manager's display windows, which are used to show image data and metadata to the user.
org.micromanager.display.overlay

Classes in org.micromanager.data used by org.micromanager

Class and Description
DataManager This class provides general utility functions for working with Micro-Manager data.
Datastore Read/write access to multi-dimensional image data.
Image A 2-dimensional pixel plane with associated multi-dimensional coordinates and metadata.
ProcessorPlugin A ProcessorPlugin is the "root" class for creating Processors, which are used to modify images as they are collected by Micro-Manager.

Classes in org.micromanager.data used by org.micromanager.acquisition

Class and Description
Datastore Read/write access to multi-dimensional image data.
Datastore.SaveMode The file format to save to.
Image A 2-dimensional pixel plane with associated multi-dimensional coordinates and metadata.
Metadata This interface defines the metadata for Images.
SummaryMetadata This class defines the summary metadata that applies to all images in a dataset.

Classes in org.micromanager.data used by org.micromanager.data

Class and Description
Annotation A Annotation is a container for mutable information that is associated with a Datastore.
Coords The multi-dimensional coordinate of a 2D image within a dataset.
Coords.Builder
Coords.CoordsBuilder
DataProvider Read-only access to multi-dimensional image data.
Datastore Read/write access to multi-dimensional image data.
Datastore.SaveMode The file format to save to.
Image A 2-dimensional pixel plane with associated multi-dimensional coordinates and metadata.
ImageJConverter This class provides access to utility methods for interoperating with ImageJ.
Metadata This interface defines the metadata for Images.
Metadata.Builder
Metadata.MetadataBuilder Deprecated. Use Metadata.Builder instead
Pipeline Pipelines are used to apply a sequence of Processors to Images prior to those images being inserted into a Datastore.
PipelineErrorException This exception is thrown when Pipeline.insertImage() has been called after an error occurred in one of the Processors in the Pipeline.
Processor Processors manipulate images before they are added to a Datastore.
ProcessorConfigurator ProcessorPluginConfigurators are used to generate the PropertyMaps needed to set up a ProcessorFactory.
ProcessorContext A ProcessorContext is an object that allows Processors to communicate with the ProcessorPipeline.
ProcessorFactory A ProcessorFactory is an object that generates new DataProcessors.
ProcessorPlugin A ProcessorPlugin is the "root" class for creating Processors, which are used to modify images as they are collected by Micro-Manager.
RewritableDatastore RewritableDatastores are Datastores that allow images and SummaryMetadata to be deleted or overwritten after they have been inserted.
Storage Storages are responsible for providing image data to Datastores when requested.
SummaryMetadata This class defines the summary metadata that applies to all images in a dataset.
SummaryMetadata.Builder
SummaryMetadata.SummaryMetadataBuilder Deprecated. - Use SummaryMetadata.Builder instead

Classes in org.micromanager.data used by org.micromanager.display

Class and Description
Coords The multi-dimensional coordinate of a 2D image within a dataset.
DataProvider Read-only access to multi-dimensional image data.
Datastore Read/write access to multi-dimensional image data.
Image A 2-dimensional pixel plane with associated multi-dimensional coordinates and metadata.

Classes in org.micromanager.data used by org.micromanager.display.overlay

Class and Description
Image A 2-dimensional pixel plane with associated multi-dimensional coordinates and metadata.