PeakFitter (ImgLib2 Javadocs 0-SNAPSHOT API)

java.lang.Object
- net.imglib2.algorithm.localization.PeakFitter<T>

All Implemented Interfaces:: Algorithm, Benchmark, MultiThreaded, OutputAlgorithm<Map<Localizable,double[]>>

public class PeakFitter<T extends RealType<T>>
extends Object
implements MultiThreaded, OutputAlgorithm<Map<Localizable,double[]>>, Benchmark

Author:: Jean-Yves Tinevez - 2013

Constructor Summary

Constructors
Constructor and Description
`PeakFitter(RandomAccessibleInterval<T> image, Collection<Localizable> peaks, FunctionFitter fitter, FitFunction peakFunction, StartPointEstimator estimator)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`boolean`	`checkInput()`
`String`	`getErrorMessage()`
`int`	`getNumThreads()` The number of threads used by the algorithm
`long`	`getProcessingTime()`
`Map<Localizable,double[]>`	`getResult()`
`boolean`	`process()`
`void`	`setNumThreads()` Sets the number of threads to the amount of processors available
`void`	`setNumThreads(int numThreads)` Sets the number of threads
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - PeakFitter
```
public PeakFitter(RandomAccessibleInterval<T> image,
                  Collection<Localizable> peaks,
                  FunctionFitter fitter,
                  FitFunction peakFunction,
                  StartPointEstimator estimator)
```
    Parameters:
    
    image - the image to operate on.
- Method Detail
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - checkInput
```
public boolean checkInput()
```
    Specified by:
    
    checkInput in interface Algorithm
  - getErrorMessage
```
public String getErrorMessage()
```
    Specified by:
    
    getErrorMessage in interface Algorithm
  - process
```
public boolean process()
```
    Specified by:
    
    process in interface Algorithm
  - getResult
```
public Map<Localizable,double[]> getResult()
```
    Specified by:
    
    getResult in interface OutputAlgorithm<Map<Localizable,double[]>>
  - setNumThreads
```
public void setNumThreads()
```
    Description copied from interface: MultiThreaded
    
    Sets the number of threads to the amount of processors available
    
    Specified by:
    
    setNumThreads in interface MultiThreaded
  - setNumThreads
```
public void setNumThreads(int numThreads)
```
    Description copied from interface: MultiThreaded
    
    Sets the number of threads
    
    Specified by:
    
    setNumThreads in interface MultiThreaded
    
    Parameters:
    
    numThreads - - number of threads to use
  - getNumThreads
```
public int getNumThreads()
```
    Description copied from interface: MultiThreaded
    
    The number of threads used by the algorithm
    
    Specified by:
    
    getNumThreads in interface MultiThreaded
    
    Returns:
    
    - the number of threads
  - getProcessingTime
```
public long getProcessingTime()
```
    Specified by:
    
    getProcessingTime in interface Benchmark

Class PeakFitter<T extends RealType<T>>

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

PeakFitter

Method Detail

toString

checkInput

getErrorMessage

process

getResult

setNumThreads

setNumThreads

getNumThreads

getProcessingTime