IterativeClosestPoint (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- spim.fiji.plugin.interestpointregistration.InterestPointRegistration
- - spim.process.interestpointregistration.icp.IterativeClosestPoint

```
public class IterativeClosestPoint
extends InterestPointRegistration
```
Iterative closest point implementation

Author:

Stephan Preibisch (stephan.preibisch@gmx.de)

Field Summary

Fields
Modifier and Type	Field and Description
`static int`	`defaultModel`
`static boolean`	`defaultRegularize`
`protected TransformationModel`	`model`
`protected IterativeClosestPointParameters`	`parameters`

Constructor Summary

Constructors
Constructor and Description
`IterativeClosestPoint(SpimData2 spimData, List<ViewId> viewIdsToProcess, List<ChannelProcess> channelsToProcess)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`addQuery(GenericDialog gd, Interest_Point_Registration.RegistrationType registrationType)` adds the questions this registration wants to ask
`String`	`getDescription()`
`protected TransformationModel`	`getTransformationModel()`
`IterativeClosestPoint`	`newInstance(SpimData2 spimData, List<ViewId> viewIdsToProcess, List<ChannelProcess> channelsToProcess)`
`protected IterativeClosestPointPairwise`	`pairwiseMatchingInstance(PairwiseMatch pair, String description)`
`boolean`	`parseDialog(GenericDialog gd, Interest_Point_Registration.RegistrationType registrationType)` queries the questions asked before

Methods inherited from class spim.fiji.plugin.interestpointregistration.InterestPointRegistration
getChannelsToProcess, getSpimData, getStatistics, getViewIdsToProcess, register, runGlobalOpt

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

defaultModel
```
public static int defaultModel
```

defaultRegularize

public static boolean defaultRegularize

model
```
protected TransformationModel model
```

parameters

protected IterativeClosestPointParameters parameters

Constructor Detail

IterativeClosestPoint

public IterativeClosestPoint(SpimData2 spimData,
                             List<ViewId> viewIdsToProcess,
                             List<ChannelProcess> channelsToProcess)

Method Detail
- pairwiseMatchingInstance
```
protected IterativeClosestPointPairwise pairwiseMatchingInstance(PairwiseMatch pair,
                                                                 String description)
```
  Specified by:
  
  pairwiseMatchingInstance in class InterestPointRegistration
  
  Parameters:
  
  pair - - which pair to compare
  
  description - - a description String which pairs are compared
  
  Returns:
  
  - the object that will perform a pairwise matching and can return a result
- getTransformationModel
```
protected TransformationModel getTransformationModel()
```
  Specified by:
  
  getTransformationModel in class InterestPointRegistration
  
  Returns:
  
  - the transformation model to be used for the global optimization, and in most cases also for RANSAC
- addQuery
```
public void addQuery(GenericDialog gd,
                     Interest_Point_Registration.RegistrationType registrationType)
```
  Description copied from class: InterestPointRegistration
  
  adds the questions this registration wants to ask
  
  Specified by:
  
  addQuery in class InterestPointRegistration
  
  registrationType - - which kind of registration
- parseDialog
```
public boolean parseDialog(GenericDialog gd,
                           Interest_Point_Registration.RegistrationType registrationType)
```
  Description copied from class: InterestPointRegistration
  
  queries the questions asked before
  
  Specified by:
  
  parseDialog in class InterestPointRegistration
  
  registrationType - - which kind of timeseries registration
  
  Returns:
- newInstance
```
public IterativeClosestPoint newInstance(SpimData2 spimData,
                                         List<ViewId> viewIdsToProcess,
                                         List<ChannelProcess> channelsToProcess)
```
  Specified by:
  
  newInstance in class InterestPointRegistration
  
  Returns:
  
  - a new instance without any special properties
- getDescription
```
public String getDescription()
```
  Specified by:
  
  getDescription in class InterestPointRegistration
  
  Returns:
  
  - to be displayed in the generic dialog

Class IterativeClosestPoint

Field Summary

Constructor Summary

Method Summary

Methods inherited from class spim.fiji.plugin.interestpointregistration.InterestPointRegistration

Methods inherited from class java.lang.Object

Field Detail

defaultModel

defaultRegularize

model

parameters

Constructor Detail

IterativeClosestPoint

Method Detail

pairwiseMatchingInstance

getTransformationModel

addQuery

parseDialog

newInstance

getDescription