MVDeconvolution (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- spim.process.fusion.deconvolution.MVDeconvolution

public class MVDeconvolution
extends Object

Field Summary

Fields
Modifier and Type	Field and Description
`static boolean`	`checkNumbers`
`static boolean`	`debug`
`static int`	`debugInterval`
`static String`	`initialImage`
`static boolean`	`setBackgroundToAvg`

Constructor Summary

Constructors
Constructor and Description
`MVDeconvolution(MVDeconInput views, MVDeconFFT.PSFTYPE iterationType, int numIterations, double lambda, double osemspeedup, int osemspeedupindex, String name)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`static void`	`copyImg(long start, long loopSize, RandomAccessibleInterval<FloatType> source, RandomAccessibleInterval<FloatType> target)` One thread of a method to compute the quotient between two images of the multiview deconvolution
`protected static double`	`fuseFirstIteration(Img<FloatType> psi, ArrayList<MVDeconFFT> views)`
`int`	`getCurrentIteration()`
`MVDeconInput`	`getData()`
`String`	`getName()`
`Img<FloatType>`	`getPsi()`
`protected static Img<FloatType>`	`loadInitialImage(String fileName, boolean checkNumbers, float minValue, Dimensions dimensions, ImgFactory<FloatType> imageFactory)`
`static void`	`main(String[] args)`
`void`	`runIteration()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

initialImage
```
public static String initialImage
```

checkNumbers
```
public static boolean checkNumbers
```

debug
```
public static boolean debug
```

debugInterval
```
public static int debugInterval
```

setBackgroundToAvg

public static boolean setBackgroundToAvg

Constructor Detail

MVDeconvolution

public MVDeconvolution(MVDeconInput views,
                       MVDeconFFT.PSFTYPE iterationType,
                       int numIterations,
                       double lambda,
                       double osemspeedup,
                       int osemspeedupindex,
                       String name)
                throws IncompatibleTypeException

Throws:: IncompatibleTypeException

Method Detail

fuseFirstIteration

protected static final double fuseFirstIteration(Img<FloatType> psi,
                                                 ArrayList<MVDeconFFT> views)

loadInitialImage

protected static Img<FloatType> loadInitialImage(String fileName,
                                                 boolean checkNumbers,
                                                 float minValue,
                                                 Dimensions dimensions,
                                                 ImgFactory<FloatType> imageFactory)

getData
```
public MVDeconInput getData()
```

getName
```
public String getName()
```

getPsi
```
public Img<FloatType> getPsi()
```

getCurrentIteration
```
public int getCurrentIteration()
```

runIteration
```
public void runIteration()
```

copyImg

public static final void copyImg(long start,
                                 long loopSize,
                                 RandomAccessibleInterval<FloatType> source,
                                 RandomAccessibleInterval<FloatType> target)

One thread of a method to compute the quotient between two images of the multiview deconvolution

Parameters:: start -; loopSize -; source -; target -

main

public static void main(String[] args)

Class MVDeconvolution

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

initialImage

checkNumbers

debug

debugInterval

setBackgroundToAvg

Constructor Detail

MVDeconvolution

Method Detail

fuseFirstIteration

loadInitialImage

getData

getName

getPsi

getCurrentIteration

runIteration

copyImg

main