Field Detail

• cuda

  public static CUDAFourierConvolution cuda

• numViews

  protected int numViews

• service

  protected final ExecutorService service

Constructor Detail

• MVDeconFFT

  public MVDeconFFT(RandomAccessibleInterval<FloatType> image,
                    RandomAccessibleInterval<FloatType> weight,
                    ArrayImg<FloatType,?> kernel,
                    ImgFactory<FloatType> blockFactory,
                    int[] deviceList,
                    boolean useBlocks,
                    int[] blockSize,
                    boolean saveMemory)

Method Detail

• setNumViews

  protected void setNumViews(int numViews)

  Parameters:

  numViews - - the number of views in the acquisition, determines the exponential of the kernel

• init

  protected void init(MVDeconFFT.PSFTYPE iterationType,
                      ArrayList<MVDeconFFT> views)
               throws IncompatibleTypeException

  This method is called once all views are added to the LRInput

  Throws:

  IncompatibleTypeException

• computeExponentialKernel

  public static ArrayImg<FloatType,?> computeExponentialKernel(ArrayImg<FloatType,?> kernel,
                                                               int numViews)

• computeInvertedKernel

  public static ArrayImg<FloatType,?> computeInvertedKernel(ArrayImg<FloatType,?> kernel)

• setImage

  public void setImage(Img<FloatType> image)

• setWeight

  public void setWeight(Img<FloatType> weight)

• setKernel

  public void setKernel(ArrayImg<FloatType,?> kernel)
                 throws IncompatibleTypeException

  Throws:

  IncompatibleTypeException

• getImage

  public RandomAccessibleInterval<FloatType> getImage()

• getWeight

  public RandomAccessibleInterval<FloatType> getWeight()

• getKernel1

  public ArrayImg<FloatType,?> getKernel1()

• getKernel2

  public ArrayImg<FloatType,?> getKernel2()

• setCurrentIteration

  public void setCurrentIteration(int i)

• getCurrentIteration

  public int getCurrentIteration()

• convolve1

  public void convolve1(Img<FloatType> image,
                        Img<FloatType> result)

  convolves the image with kernel1

  Parameters:

  image - - the image to convolve with

• convolve2

  public void convolve2(Img<FloatType> image,
                        Img<FloatType> result)

  convolves the image with kernel2 (inverted kernel1)

  Parameters:

  image - - the image to convolve with