Constructor Detail

• DHMMetaData

  public DHMMetaData(File directory,
                     double calX,
                     double calY,
                     double calZ,
                     String calUnit,
                     boolean compareAllSizes)

Method Detail

• loadMetaData

  public boolean loadMetaData()

• getDir

  public File getDir()

• getStackDir

  public String getStackDir()

• getAmplitudeDir

  public String getAmplitudeDir()

• getPhaseDir

  public String getPhaseDir()

• getZPlanes

  public List<String> getZPlanes()

• getTimepoints

  public List<String> getTimepoints()

• getAmpChannelId

  public int getAmpChannelId()

• getPhaseChannelId

  public int getPhaseChannelId()

• getWidth

  public int getWidth()

• getHeight

  public int getHeight()

• getDepth

  public int getDepth()

• getExt

  public String getExt()

• getTimestampsAndZPlanes

  public boolean getTimestampsAndZPlanes(boolean compareAllSizes)

  Go through the directories and make sure all timestamps are present for all ampliude/phase-stacks

  Parameters:

  compareAllSizes - - open all 2d-planes and make sure the dimensions match?

  Returns:

• commonStrings

  public static List<String> commonStrings(List<String> listA,
                                           List<String> listB)

• loadTimepoints

  public static Pair<List<String>,String> loadTimepoints(File dataDir)

• parseTimestamps

  public boolean parseTimestamps(File directory,
                                 String timestampFile)

• checkIntegrity

  public boolean checkIntegrity(File directory)

• main

  public static void main(String[] args)