| Package | Description |
|---|---|
| sc.fiji.coloc | |
| sc.fiji.coloc.algorithms | |
| sc.fiji.coloc.gadgets | |
| sc.fiji.coloc.results |
| Class and Description |
|---|
| Algorithm
An algorithm is an abstraction of techniques like the
calculation of the Persons coefficient or Li'S ICQ.
|
| CostesSignificanceTest |
| Histogram2D
Represents the creation of a 2D histogram between two images.
|
| KendallTauRankCorrelation
This algorithm calculates Kendall's Tau-b rank correlation coefficient
|
| LiHistogram2D
Represents the creation of a 2D histogram between two images.
|
| LiICQ
This algorithm calculates Li et al.'s ICQ (intensity
correlation quotient).
|
| MandersColocalization
This algorithm calculates Manders et al.'s split colocalization
coefficients, M1 and M2.
|
| MissingPreconditionException
An exception class for missing preconditions for algorithm execution.
|
| PearsonsCorrelation
A class that represents the mean calculation of the two source
images in the data container.
|
| SpearmanRankCorrelation
This algorithm calculates Spearman's rank correlation coefficient (Spearman's rho)
|
| Class and Description |
|---|
| Algorithm
An algorithm is an abstraction of techniques like the
calculation of the Persons coefficient or Li'S ICQ.
|
| AutoThresholdRegression.Implementation |
| Histogram2D
Represents the creation of a 2D histogram between two images.
|
| Histogram2D.DrawingFlags |
| IntComparator |
| MandersColocalization.MandersResults
A result container for Manders' calculations.
|
| MissingPreconditionException
An exception class for missing preconditions for algorithm execution.
|
| PearsonsCorrelation
A class that represents the mean calculation of the two source
images in the data container.
|
| PearsonsCorrelation.Implementation |
| Stepper
A stepper is used to change some value with every update() call.
|
| Class and Description |
|---|
| Algorithm
An algorithm is an abstraction of techniques like the
calculation of the Persons coefficient or Li'S ICQ.
|
| AutoThresholdRegression
A class implementing the automatic finding of a threshold
used for Pearson colocalisation calculation.
|
| InputCheck
This class implements some basic checks for the input image data.
|
| MissingPreconditionException
An exception class for missing preconditions for algorithm execution.
|
| Class and Description |
|---|
| Histogram2D
Represents the creation of a 2D histogram between two images.
|
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