Package | Description |
---|---|
sc.fiji.analyzeSkeleton | |
sc.fiji.analyzeSkeleton.ita |
Modifier and Type | Method and Description |
---|---|
Vertex |
Vertex.cloneUnconnected()
Clones the Vertex disconnected from its
Graph |
Vertex |
AnalyzeSkeleton_.findPointVertex(Vertex[] vertex,
Point p)
Find vertex in an array given a specific vertex point.
|
Vertex |
Edge.getOppositeVertex(Vertex v)
Get opposite vertex from a given one.
|
Vertex |
Graph.getRoot()
Get root vertex.
|
Vertex |
Edge.getV1()
Get first vertex.
|
Vertex |
Edge.getV2()
Get second vertex.
|
Modifier and Type | Method and Description |
---|---|
ArrayList<Vertex> |
Graph.getVertices()
Get list of vertices in the graph.
|
Modifier and Type | Method and Description |
---|---|
boolean |
Graph.addVertex(Vertex v)
Add vertex to the graph.
|
Edge |
Edge.clone(Vertex v1,
Vertex v2)
Clones the Edge with all its properties
|
Vertex |
AnalyzeSkeleton_.findPointVertex(Vertex[] vertex,
Point p)
Find vertex in an array given a specific vertex point.
|
Vertex |
Edge.getOppositeVertex(Vertex v)
Get opposite vertex from a given one.
|
Constructor and Description |
---|
Edge(Vertex v1,
Vertex v2,
ArrayList<Point> slabs,
double length)
Create an edge of specific vertices and list of slab voxels.
|
Edge(Vertex v1,
Vertex v2,
ArrayList<Point> slabs,
double length,
double color3rd,
double color,
double length_ra)
Create an edge of specific vertices and list of slab voxels.
|
Modifier and Type | Method and Description |
---|---|
static Map<Integer,List<Vertex>> |
VertexUtils.groupByValence(Collection<Vertex> vertices,
int min,
int max)
Groups vertices by their valence, i.e.
|
Modifier and Type | Method and Description |
---|---|
static List<List<Double>> |
VertexUtils.getNJunctionAngles(Collection<Vertex> vertices)
Calculates the angles between the branches of each vertex.
|
static Map<Integer,List<Vertex>> |
VertexUtils.groupByValence(Collection<Vertex> vertices,
int min,
int max)
Groups vertices by their valence, i.e.
|
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