Edge (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- sc.fiji.analyzeSkeleton.Edge

```
public class Edge
extends Object
```
This class represents the edge between two vertices in an undirected graph.

Field Summary

Fields
Modifier and Type	Field and Description
`static int`	`BACK` "back" edge classification constant for Depth-first search (DFS)
`static int`	`TREE` "tree" edge classification constant for Depth-first search (DFS)
`static int`	`UNDEFINED` not yet defined edge classification constant for Depth-first search (DFS)

Constructor Summary

Constructors
Constructor and Description
`Edge(Vertex v1, Vertex v2, ArrayList<Point> slabs, double length)` Create an edge of specific vertices and list of slab voxels.
`Edge(Vertex v1, Vertex v2, ArrayList<Point> slabs, double length, double color3rd, double color, double length_ra)` Create an edge of specific vertices and list of slab voxels.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Edge`	`clone(Vertex v1, Vertex v2)` Clones the Edge with all its properties
`double`	`getColor()`
`double`	`getColor3rd()`
`double`	`getLength_ra()` Get edge length_ra (running average)
`double`	`getLength()` Get edge length
`Vertex`	`getOppositeVertex(Vertex v)` Get opposite vertex from a given one.
`ArrayList<Point>`	`getSlabs()` Get list of slab voxels belonging to the edge.
`int`	`getType()` Get DFS edge type
`Vertex`	`getV1()` Get first vertex.
`Vertex`	`getV2()` Get second vertex.
`void`	`setColor(double color)`
`void`	`setColor3rd(double color)`
`void`	`setLength(double length)` Set edge length
`void`	`setType(int type)` Set DFS type (BACK or TREE)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - TREE
```
public static final int TREE
```
    "tree" edge classification constant for Depth-first search (DFS)
    
    See Also:
    
    Constant Field Values
  - BACK
```
public static final int BACK
```
    "back" edge classification constant for Depth-first search (DFS)
    
    See Also:
    
    Constant Field Values
  - UNDEFINED
```
public static final int UNDEFINED
```
    not yet defined edge classification constant for Depth-first search (DFS)
    
    See Also:
    
    Constant Field Values
- Constructor Detail
  - Edge
```
public Edge(Vertex v1,
            Vertex v2,
            ArrayList<Point> slabs,
            double length)
```
    Create an edge of specific vertices and list of slab voxels.
    
    Parameters:
    
    v1 - first vertex
    
    v2 - second vertex
    
    slabs - list of slab voxels
    
    length - calibrated edge length
  - Edge
```
public Edge(Vertex v1,
            Vertex v2,
            ArrayList<Point> slabs,
            double length,
            double color3rd,
            double color,
            double length_ra)
```
    Create an edge of specific vertices and list of slab voxels.
    
    Parameters:
    
    v1 - first vertex
    
    v2 - second vertex
    
    slabs - list of slab voxels
    
    length - calibrated edge length
    
    color3rd - average color value of the inner third
    
    color - average color value
    
    length_ra - calibrated edge length calculated with running average ofer 5 Pixel
- Method Detail
  - getV1
```
public Vertex getV1()
```
    Get first vertex.
    
    Returns:
    
    first vertex of the edge
  - getV2
```
public Vertex getV2()
```
    Get second vertex.
    
    Returns:
    
    second vertex of the edge
  - getSlabs
```
public ArrayList<Point> getSlabs()
```
    Get list of slab voxels belonging to the edge.
    
    Returns:
    
    list of slab voxels
  - setType
```
public void setType(int type)
```
    Set DFS type (BACK or TREE)
    
    Parameters:
    
    type - DFS classification (BACK or TREE)
  - getType
```
public int getType()
```
    Get DFS edge type
    
    Returns:
    
    DFS classification type
  - getOppositeVertex
```
public Vertex getOppositeVertex(Vertex v)
```
    Get opposite vertex from a given one.
    
    Parameters:
    
    v - input vertex
    
    Returns:
    
    opposite vertex in the edge
  - setLength
```
public void setLength(double length)
```
    Set edge length
    
    Parameters:
    
    length - calibrated edge length
  - getLength
```
public double getLength()
```
    Get edge length
    
    Returns:
    
    calibrated edge length
  - getLength_ra
```
public double getLength_ra()
```
    Get edge length_ra (running average)
    
    Returns:
    
    calibrated edge length (running average)
  - setColor
```
public void setColor(double color)
```
  - getColor
```
public double getColor()
```
  - setColor3rd
```
public void setColor3rd(double color)
```
  - getColor3rd
```
public double getColor3rd()
```
  - clone
```
public Edge clone(Vertex v1,
                  Vertex v2)
```
    Clones the Edge with all its properties
    NB Does not clone the vertices!
    
    Parameters:
    
    v1 - One endpoint of the edge, can be null
    
    v2 - The other endpoint of the edge, can be null

Class Edge

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

TREE

BACK

UNDEFINED

Constructor Detail

Edge

Edge

Method Detail

getV1

getV2

getSlabs

setType

getType

getOppositeVertex

setLength

getLength

getLength_ra

setColor

getColor

setColor3rd

getColor3rd

clone