Particle (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- mpicbg.models.Point
- - process.Particle

All Implemented Interfaces:

Leaf<Particle>, Node<Particle>, Serializable
```
public class Particle
extends Point
implements Leaf<Particle>
```
See Also:

Serialized Form

Field Summary

Fields
Modifier and Type	Field and Description
`protected double`	`distance`
`protected int`	`id`
`protected DifferenceOfGaussianPeak<FloatType>`	`peak`
`protected boolean`	`useW`
`protected double`	`weight`

Fields inherited from class mpicbg.models.Point
l, w

Constructor Summary

Constructors
Constructor and Description

Particle(int id, DifferenceOfGaussianPeak<FloatType> peak, float zStretching)

Constructors
Constructor and Description
`Particle(int id, DifferenceOfGaussianPeak<FloatType> peak, float zStretching)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Particle[]`	`createArray(int n)`
`float`	`distanceTo(Particle o)`
`boolean`	`equals(Particle o)`
`static boolean`	`equals(Particle nucleus1, Particle nucleus2)`
`float`	`get(int k)`
`float`	`getDiameter()`
`double`	`getDistance()`
`long`	`getID()`
`int`	`getNumDimensions()`
`DifferenceOfGaussianPeak<FloatType>`	`getPeak()`
`boolean`	`getUseW()`
`double`	`getWeight()`
`boolean`	`isLeaf()`
`void`	`resetW()`
`void`	`restoreCoordinates()` Restores the local and global coordinates from the peak that feeded it initially, they might have been changed by applying a model during the optimization
`void`	`set(float v, int k)`
`void`	`setDiameter(float diameter)`
`void`	`setDistance(double distance)`
`void`	`setUseW(boolean useW)`
`void`	`setW(float[] wn)`
`void`	`setWeight(double weight)`
`String`	`toString()`

Methods inherited from class mpicbg.models.Point
apply, apply, apply, applyInverse, applyInverse, clone, distance, distance, getL, getW, localDistance, squareDistance, squareDistance, squareLocalDistance

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

id
```
protected final int id
```

peak

protected DifferenceOfGaussianPeak<FloatType> peak

weight
```
protected double weight
```

distance
```
protected double distance
```

useW
```
protected boolean useW
```

Constructor Detail

Particle

public Particle(int id,
                DifferenceOfGaussianPeak<FloatType> peak,
                float zStretching)

Method Detail

getPeak

public DifferenceOfGaussianPeak<FloatType> getPeak()

restoreCoordinates
```
public void restoreCoordinates()
```
Restores the local and global coordinates from the peak that feeded it initially, they might have been changed by applying a model during the optimization

getID
```
public long getID()
```

setWeight
```
public void setWeight(double weight)
```

getWeight
```
public double getWeight()
```

setDiameter

public void setDiameter(float diameter)

getDiameter
```
public float getDiameter()
```

setW
```
public final void setW(float[] wn)
```

resetW
```
public final void resetW()
```

setUseW
```
public void setUseW(boolean useW)
```

getUseW
```
public boolean getUseW()
```

setDistance

public void setDistance(double distance)

getDistance
```
public double getDistance()
```

get
```
public float get(int k)
```
Specified by:

get in interface Leaf<Particle>

set

public void set(float v,
                int k)

toString
```
public String toString()
```
Overrides:

toString in class Object

isLeaf
```
public boolean isLeaf()
```
Specified by:

isLeaf in interface Node<Particle>

distanceTo
```
public float distanceTo(Particle o)
```
Specified by:

distanceTo in interface Leaf<Particle>

createArray
```
public Particle[] createArray(int n)
```
Specified by:

createArray in interface Leaf<Particle>

getNumDimensions
```
public int getNumDimensions()
```
Specified by:

getNumDimensions in interface Leaf<Particle>

equals
```
public boolean equals(Particle o)
```

equals

public static boolean equals(Particle nucleus1,
                             Particle nucleus2)

Class Particle

Field Summary

Fields inherited from class mpicbg.models.Point

Constructor Summary

Method Summary

Methods inherited from class mpicbg.models.Point

Methods inherited from class java.lang.Object

Field Detail

id

peak

weight

distance

useW

Constructor Detail

Particle

Method Detail

getPeak

restoreCoordinates

getID

setWeight

getWeight

setDiameter

getDiameter

setW

resetW

setUseW

getUseW

setDistance

getDistance

get

set

toString

isLeaf

distanceTo

createArray

getNumDimensions

equals

equals