public class PreDeconvolutionFusion extends SPIMImageFusion implements PreDeconvolutionFusionInterface
combinedWeightenerFactories, conf, cropOffsetX, cropOffsetY, cropOffsetZ, imgD, imgH, imgW, isolatedWeightenerFactories, location000, max, min, scale, size, viewStructure
Constructor and Description |
---|
PreDeconvolutionFusion(ViewStructure viewStructure,
ViewStructure referenceViewStructure,
ArrayList<IsolatedPixelWeightenerFactory<?>> isolatedWeightenerFactories,
ArrayList<CombinedPixelWeightenerFactory<?>> combinedWeightenerFactories) |
Modifier and Type | Method and Description |
---|---|
void |
closeImages() |
void |
fuseSPIMImages(int channelIndex) |
ExtractPSF |
getExtractPSFInstance() |
Image<FloatType> |
getFusedImage() |
Image<FloatType> |
getFusedImage(int index) |
Image<FloatType> |
getOverlapImage() |
ArrayList<Image<FloatType>> |
getPointSpreadFunctions() |
Image<FloatType> |
getWeightImage(int index) |
static void |
subtractBackground(Image<FloatType> img,
float value) |
computeFinalImageSize, computeImageSize, getFusedImageCopy, getFusedImageVirtual, getOutputImageMaxCoordinate, getOutputImageMinCoordinate, getOutputImageSize, initFusion, saveAsTiffs
public PreDeconvolutionFusion(ViewStructure viewStructure, ViewStructure referenceViewStructure, ArrayList<IsolatedPixelWeightenerFactory<?>> isolatedWeightenerFactories, ArrayList<CombinedPixelWeightenerFactory<?>> combinedWeightenerFactories)
public void fuseSPIMImages(int channelIndex)
fuseSPIMImages
in class SPIMImageFusion
public Image<FloatType> getFusedImage()
getFusedImage
in class SPIMImageFusion
public Image<FloatType> getFusedImage(int index)
getFusedImage
in interface PreDeconvolutionFusionInterface
public Image<FloatType> getWeightImage(int index)
getWeightImage
in interface PreDeconvolutionFusionInterface
public void closeImages()
closeImages
in class SPIMImageFusion
public ArrayList<Image<FloatType>> getPointSpreadFunctions()
getPointSpreadFunctions
in interface PreDeconvolutionFusionInterface
public ExtractPSF getExtractPSFInstance()
getExtractPSFInstance
in interface PreDeconvolutionFusionInterface
public Image<FloatType> getOverlapImage()
getOverlapImage
in interface PreDeconvolutionFusionInterface
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