| Package | Description |
|---|---|
| bdv.spimdata.tools | |
| mpicbg.spim.data.registration | |
| spim.fiji.spimdata.explorer.registration |
| Modifier and Type | Method and Description |
|---|---|
static void |
MergeExample.mergeHdf5ViewsSetups(List<String> inputFilenames,
List<ViewTransform> transforms,
String outputXmlFilename)
Merge multiple HDF5 datasets, where each dataset contains the same
timepoints but different views.
|
| Modifier and Type | Interface and Description |
|---|---|
interface |
ViewTransformGeneric |
| Modifier and Type | Class and Description |
|---|---|
class |
ViewTransformAffine |
| Modifier and Type | Field and Description |
|---|---|
protected ArrayList<ViewTransform> |
ViewRegistration.transformList |
| Modifier and Type | Method and Description |
|---|---|
ViewTransform |
XmlIoViewTransform.fromXml(org.jdom2.Element viewTransform)
Load a
ViewTransform from the given DOM element. |
| Modifier and Type | Method and Description |
|---|---|
List<ViewTransform> |
ViewRegistration.getTransformList()
Get the list of
transforms. |
| Modifier and Type | Method and Description |
|---|---|
void |
ViewRegistration.concatenateTransform(ViewTransform transform)
Concatenate a transform to the
transform list
and update the concatenated model. |
void |
ViewRegistration.preconcatenateTransform(ViewTransform transform)
Pre-concatenate a transform to the
transform
list and update the concatenated model. |
org.jdom2.Element |
XmlIoViewTransform.toXml(ViewTransform viewTransform) |
| Constructor and Description |
|---|
ViewRegistration(int timepointId,
int setupId,
ArrayList<ViewTransform> transforms)
Creates a new
ViewRegistration object using a list of
ViewTransform transforms. |
| Modifier and Type | Field and Description |
|---|---|
protected ArrayList<ViewTransform> |
RegistrationExplorerPanel.cache |
| Modifier and Type | Method and Description |
|---|---|
protected static ViewTransform |
RegistrationExplorerPanel.duplicate(ViewTransform vt) |
protected static ViewTransform |
RegistrationExplorerPanel.newMatrixEntry(ViewTransform vt,
double value,
int index) |
protected static ViewTransform |
RegistrationExplorerPanel.newName(ViewTransform vt,
String name) |
| Modifier and Type | Method and Description |
|---|---|
protected static ViewTransform |
RegistrationExplorerPanel.duplicate(ViewTransform vt) |
protected static ViewTransform |
RegistrationExplorerPanel.newMatrixEntry(ViewTransform vt,
double value,
int index) |
protected static ViewTransform |
RegistrationExplorerPanel.newName(ViewTransform vt,
String name) |
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