LabelImageDetector (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- fiji.plugin.trackmate.detection.LabelImageDetector<T>

All Implemented Interfaces:: SpotDetector<T>, Algorithm, Benchmark, OutputAlgorithm<List<Spot>>

public class LabelImageDetector<T extends RealType<T> & NativeType<T>>
extends Object
implements SpotDetector<T>

Field Summary

Fields
Modifier and Type	Field and Description
`protected String`	`baseErrorMessage`
`protected double[]`	`calibration`
`protected String`	`errorMessage`
`protected RandomAccessible<T>`	`input` The mask.
`protected Interval`	`interval`
`protected int`	`numThreads`
`protected long`	`processingTime` The processing time in ms.
`protected boolean`	`simplify` If `true`, the contours will be smoothed and simplified.
`protected List<Spot>`	`spots` The list of `Spot` that will be populated by this detector.

Constructor Summary

Constructors
Constructor and Description
`LabelImageDetector(RandomAccessible<T> input, Interval interval, double[] calibration, boolean simplify)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`boolean`	`checkInput()`
`String`	`getErrorMessage()`
`long`	`getProcessingTime()`
`List<Spot>`	`getResult()`
`boolean`	`process()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

input

protected RandomAccessible<T extends RealType<T> & NativeType<T>> input

The mask.

baseErrorMessage
```
protected String baseErrorMessage
```

errorMessage
```
protected String errorMessage
```

spots
```
protected List<Spot> spots
```
The list of Spot that will be populated by this detector.

processingTime
```
protected long processingTime
```
The processing time in ms.

numThreads
```
protected int numThreads
```

interval
```
protected final Interval interval
```

calibration
```
protected final double[] calibration
```

simplify
```
protected final boolean simplify
```
If true, the contours will be smoothed and simplified.

Constructor Detail

LabelImageDetector

public LabelImageDetector(RandomAccessible<T> input,
                          Interval interval,
                          double[] calibration,
                          boolean simplify)

Method Detail
- checkInput
```
public boolean checkInput()
```
  Specified by:
  
  checkInput in interface Algorithm
- process
```
public boolean process()
```
  Specified by:
  
  process in interface Algorithm
- getResult
```
public List<Spot> getResult()
```
  Specified by:
  
  getResult in interface OutputAlgorithm<List<Spot>>
- getErrorMessage
```
public String getErrorMessage()
```
  Specified by:
  
  getErrorMessage in interface Algorithm
- getProcessingTime
```
public long getProcessingTime()
```
  Specified by:
  
  getProcessingTime in interface Benchmark

Class LabelImageDetector<T extends RealType<T> & NativeType<T>>

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

input

baseErrorMessage

errorMessage

spots

processingTime

numThreads

interval

calibration

simplify

Constructor Detail

LabelImageDetector

Method Detail

checkInput

process

getResult

getErrorMessage

getProcessingTime