BwN5SingleScaleLegacyMetadata (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- org.janelia.saalfeldlab.n5.metadata.AbstractN5Metadata<BwN5SingleScaleLegacyMetadata>
- - bigwarp.metadata.BwN5SingleScaleLegacyMetadata

All Implemented Interfaces:

org.janelia.saalfeldlab.n5.metadata.ImageplusMetadata<BwN5SingleScaleLegacyMetadata>, org.janelia.saalfeldlab.n5.metadata.N5GsonMetadataParser<BwN5SingleScaleLegacyMetadata>, org.janelia.saalfeldlab.n5.metadata.N5Metadata, org.janelia.saalfeldlab.n5.metadata.N5MetadataParser<BwN5SingleScaleLegacyMetadata>, org.janelia.saalfeldlab.n5.metadata.N5MetadataWriter<BwN5SingleScaleLegacyMetadata>, org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata
```
public class BwN5SingleScaleLegacyMetadata
extends org.janelia.saalfeldlab.n5.metadata.AbstractN5Metadata<BwN5SingleScaleLegacyMetadata>
implements org.janelia.saalfeldlab.n5.metadata.ImageplusMetadata<BwN5SingleScaleLegacyMetadata>, org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata
```

Field Summary

Fields
Modifier and Type	Field and Description
`static String`	`AFFINE_TRANSFORM_KEY`
`static String`	`DOWNSAMPLING_FACTORS_KEY`
`static String`	`PIXEL_RESOLUTION_KEY`
`double[]`	`resolution`
`AffineTransform3D`	`transform`

Constructor Summary

Constructors
Constructor and Description
`BwN5SingleScaleLegacyMetadata()`
`BwN5SingleScaleLegacyMetadata(String path)`
`BwN5SingleScaleLegacyMetadata(String path, AffineTransform3D transform)`
`BwN5SingleScaleLegacyMetadata(String path, AffineTransform3D transform, org.janelia.saalfeldlab.n5.DatasetAttributes attributes)`
`BwN5SingleScaleLegacyMetadata(String path, double[] resolution, org.janelia.saalfeldlab.n5.DatasetAttributes attributes)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`boolean`	`check(Map<String,Object> metaMap)`
`HashMap<String,Class<?>>`	`keysToTypes()`
`BwN5SingleScaleLegacyMetadata`	`parseMetadata(Map<String,Object> metaMap)`
`AffineGet`	`physicalTransform()`
`BwN5SingleScaleLegacyMetadata`	`readMetadata(ij.ImagePlus ip)`
`String[]`	`units()`
`void`	`writeMetadata(BwN5SingleScaleLegacyMetadata t, ij.ImagePlus ip)`
`void`	`writeMetadata(BwN5SingleScaleLegacyMetadata t, org.janelia.saalfeldlab.n5.N5Writer n5, String dataset)`

Methods inherited from class org.janelia.saalfeldlab.n5.metadata.AbstractN5Metadata
addDatasetAttributeKeys, datasetAtttributeKeys, getAttributes, getPath

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata
physicalTransform3d

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5Metadata
getAttributes, getGsonBuilder, getPath, registerGsonTypeAdapters

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5GsonMetadataParser
parseDatasetAttributes, parseDatasetAttributesJson, parseMetadata, parseMetadata, parseMetadata, parseMetadataGson, parseMetadataGson, parseMetadataGson, parseMetadataGson

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5MetadataParser
hasRequiredKeys, parseAttributes, parseMetadataStatic

Field Detail

DOWNSAMPLING_FACTORS_KEY

public static final String DOWNSAMPLING_FACTORS_KEY

See Also:: Constant Field Values

PIXEL_RESOLUTION_KEY

public static final String PIXEL_RESOLUTION_KEY

See Also:: Constant Field Values

AFFINE_TRANSFORM_KEY

public static final String AFFINE_TRANSFORM_KEY

See Also:: Constant Field Values

transform

public final AffineTransform3D transform

resolution
```
public final double[] resolution
```

Constructor Detail

BwN5SingleScaleLegacyMetadata

public BwN5SingleScaleLegacyMetadata(String path,
                                     AffineTransform3D transform,
                                     org.janelia.saalfeldlab.n5.DatasetAttributes attributes)

BwN5SingleScaleLegacyMetadata

public BwN5SingleScaleLegacyMetadata(String path,
                                     AffineTransform3D transform)

BwN5SingleScaleLegacyMetadata

public BwN5SingleScaleLegacyMetadata(String path)

BwN5SingleScaleLegacyMetadata
```
public BwN5SingleScaleLegacyMetadata()
```

BwN5SingleScaleLegacyMetadata

public BwN5SingleScaleLegacyMetadata(String path,
                                     double[] resolution,
                                     org.janelia.saalfeldlab.n5.DatasetAttributes attributes)

Method Detail
- keysToTypes
```
public HashMap<String,Class<?>> keysToTypes()
```
  Specified by:
  
  keysToTypes in interface org.janelia.saalfeldlab.n5.metadata.N5MetadataParser<BwN5SingleScaleLegacyMetadata>
- check
```
public boolean check(Map<String,Object> metaMap)
```
  Specified by:
  
  check in interface org.janelia.saalfeldlab.n5.metadata.N5MetadataParser<BwN5SingleScaleLegacyMetadata>
- parseMetadata
```
public BwN5SingleScaleLegacyMetadata parseMetadata(Map<String,Object> metaMap)
                                            throws Exception
```
  Specified by:
  
  parseMetadata in interface org.janelia.saalfeldlab.n5.metadata.N5MetadataParser<BwN5SingleScaleLegacyMetadata>
  
  Throws:
  
  Exception
- writeMetadata
```
public void writeMetadata(BwN5SingleScaleLegacyMetadata t,
                          org.janelia.saalfeldlab.n5.N5Writer n5,
                          String dataset)
                   throws Exception
```
  Specified by:
  
  writeMetadata in interface org.janelia.saalfeldlab.n5.metadata.N5MetadataWriter<BwN5SingleScaleLegacyMetadata>
  
  Throws:
  
  Exception
- writeMetadata
```
public void writeMetadata(BwN5SingleScaleLegacyMetadata t,
                          ij.ImagePlus ip)
                   throws IOException
```
  Specified by:
  
  writeMetadata in interface org.janelia.saalfeldlab.n5.metadata.ImageplusMetadata<BwN5SingleScaleLegacyMetadata>
  
  Throws:
  
  IOException
- readMetadata
```
public BwN5SingleScaleLegacyMetadata readMetadata(ij.ImagePlus ip)
                                           throws IOException
```
  Specified by:
  
  readMetadata in interface org.janelia.saalfeldlab.n5.metadata.ImageplusMetadata<BwN5SingleScaleLegacyMetadata>
  
  Throws:
  
  IOException
- physicalTransform
```
public AffineGet physicalTransform()
```
  Specified by:
  
  physicalTransform in interface org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata
- units
```
public String[] units()
```
  Specified by:
  
  units in interface org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata

Class BwN5SingleScaleLegacyMetadata

Field Summary

Constructor Summary

Method Summary

Methods inherited from class org.janelia.saalfeldlab.n5.metadata.AbstractN5Metadata

Methods inherited from class java.lang.Object

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.PhysicalMetadata

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5Metadata

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5GsonMetadataParser

Methods inherited from interface org.janelia.saalfeldlab.n5.metadata.N5MetadataParser

Field Detail

DOWNSAMPLING_FACTORS_KEY

PIXEL_RESOLUTION_KEY

AFFINE_TRANSFORM_KEY

transform

resolution

Constructor Detail

BwN5SingleScaleLegacyMetadata

BwN5SingleScaleLegacyMetadata

BwN5SingleScaleLegacyMetadata

BwN5SingleScaleLegacyMetadata

BwN5SingleScaleLegacyMetadata

Method Detail

keysToTypes

check

parseMetadata

writeMetadata

writeMetadata

readMetadata

physicalTransform

units