- RAHelper<I extends RealType<I>> - Class in flimlib.flimj.utils
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- RAHelper(FitParams<I>, FitResults) - Constructor for class flimlib.flimj.utils.RAHelper
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- rawChisq_target - Variable in class flimlib.flimj.fitworker.AbstractFitWorker
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The raw chisq target (params.chisq is reduced by DOF)
- refresh(FitParams<FloatType>, FitResults) - Method in class flimlib.flimj.ui.controller.AbstractCtrl
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The callback called when the controller is supposed to refresh itself based on the parameters
and the results provided by the arguments.
- refresh(FitParams<FloatType>, FitResults) - Method in class flimlib.flimj.ui.controller.ExportCtrl
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- refresh(FitParams<FloatType>, FitResults) - Method in class flimlib.flimj.ui.controller.PlotCtrl
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- refresh(FitParams<FloatType>, FitResults) - Method in class flimlib.flimj.ui.controller.PreviewCtrl
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- refresh(FitParams<FloatType>, FitResults) - Method in class flimlib.flimj.ui.controller.SettingsCtrl
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- refreshControllers() - Method in class flimlib.flimj.ui.FitProcessor
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Refreshes all controllers.
- requestRefresh() - Method in class flimlib.flimj.ui.controller.AbstractCtrl
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Called by external control flow to notify the controller to refresh itself.
- requestUpdate() - Method in class flimlib.flimj.ui.controller.AbstractCtrl
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Called by the controller to notify the fit processor to perform a fit and other controllers
to update themselves based on the fit results.
- residualBuffer - Variable in class flimlib.flimj.fitworker.AbstractSingleFitWorker
-
Data buffers, all except for transBuffer are writable
- residuals - Variable in class flimlib.flimj.FitResults
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The residuals (y - y_fitted) of the fit
- residualsMap - Variable in class flimlib.flimj.FitResults
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The image representation of residuals of the fit over the the dataset
- restrain - Variable in class flimlib.flimj.FitParams
-
- restraintMax - Variable in class flimlib.flimj.FitParams
-
The fit restraints (min or max) for each parameter.
- restraintMin - Variable in class flimlib.flimj.FitParams
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The fit restraints (min or max) for each parameter.
- RestrainType - Enum in flimlib
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- results - Variable in class flimlib.flimj.fitworker.AbstractFitWorker
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The fit results for this worker
- RET_BAD_FIT_CHISQ_OUT_OF_RANGE - Static variable in class flimlib.flimj.FitResults
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The return code for a fit that succeeded but has chisq > 1e5
- RET_BAD_FIT_DIVERGED - Static variable in class flimlib.flimj.FitResults
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The return code for a fit that failed by flimlib
- RET_BAD_SETTING - Static variable in class flimlib.flimj.FitResults
-
The return code for a fit that failed because of improper arguments
- RET_INTENSITY_BELOW_THRESH - Static variable in class flimlib.flimj.FitResults
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The return code for a fit that was not performed because the intensity is below threshold
- RET_INTERNAL_ERROR - Static variable in class flimlib.flimj.FitResults
-
The return code for a fit that failed because of error in native code (e.g.
- RET_OK - Static variable in class flimlib.flimj.FitResults
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The return code for a good fit
- RET_UNKNOWN - Static variable in class flimlib.flimj.FitResults
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The return code for unknown fit status
- retCode - Variable in class flimlib.flimj.FitResults
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The return code of the fit
- retCodeMap - Variable in class flimlib.flimj.FitResults
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The image representation of return codes of the fit over the dataset
- RLD_fit(double, double[], int, int, double[], int, double[], double[], double[], double[], double[], double[], double) - Static method in class flimlib.FLIMLib
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- RLD_fit(double, double[], int, int, double[], int, double[], double[], double[], double[], double[], double[], double) - Static method in class flimlib.FLIMLibJNI
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- RLDFitWorker<I extends RealType<I>> - Class in flimlib.flimj.fitworker
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- RLDFitWorker(FitParams<I>, FitResults, OpEnvironment) - Constructor for class flimlib.flimj.fitworker.RLDFitWorker
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- RLDSingleFitRAI() - Constructor for class flimlib.flimj.DefaultFitRAI.RLDSingleFitRAI
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- roiMask - Variable in class flimlib.flimj.FitParams
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The ROI mask (test() returns true on interested regions)
- run() - Method in class flimlib.flimj.ui.FLIMJCommand
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- valueOf(String) - Static method in enum flimlib.FitType
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Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum flimlib.flimj.ui.FitProcessor.FitType
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Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum flimlib.NoiseType
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Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum flimlib.RestrainType
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Returns the enum constant of this type with the specified name.
- values() - Static method in enum flimlib.FitType
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Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum flimlib.flimj.ui.FitProcessor.FitType
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Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum flimlib.NoiseType
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Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum flimlib.RestrainType
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Returns an array containing the constants of this enum type, in
the order they are declared.
- VariableScaleAxis - Class in flimlib.flimj.ui
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A variable (log/linear) scale axis implementation for JavaFX 2 charts.
- VariableScaleAxis() - Constructor for class flimlib.flimj.ui.VariableScaleAxis
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Creates a autoranging log axis.
- VariableScaleAxis(double, double, double) - Constructor for class flimlib.flimj.ui.VariableScaleAxis
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Creates a fixed range log axis.
- VariableScaleAxis.AxisRange - Class in flimlib.flimj.ui
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The bean for passing range information.