script.imglib.algorithm.fn

Class Morph<T extends RealType<T>>

java.lang.Object

mpicbg.imglib.image.Image<T>

script.imglib.algorithm.fn.Morph<T>

All Implemented Interfaces:

Iterable<T>, Collection<T>, ImageProperties, Dimensionality

Direct Known Subclasses:

Close, Dilate, Erode, Open

public abstract class Morph<T extends RealType<T>>
extends Image<T>

Morphological operations such as Open, Close, Erode and Dilate. The operation takes any of CUBE, BALL, BAR, each with a length. In ImageJ, the equivalent would be a CUBE with length 3. The lengthDim is only useful for BAR, and specifies in which axis to grow the bar.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	Morph.Shape

Field Summary

Fields

Modifier and Type	Field and Description
static Morph.Shape	BALL
static Morph.Shape	BAR
static Morph.Shape	CUBE

Fields inherited from class mpicbg.imglib.image.Image

calibration, cursors, display, name

Constructor Summary

Constructors

Constructor and Description
Morph(Object fn, Class<?> c, Morph.Shape s, int shapeLength, int lengthDim, float outside)

Method Summary

Methods inherited from class mpicbg.imglib.image.Image

add, addAll, addCursor, clear, clone, close, closeAllCursors, contains, containsAll, createCursor, createInterpolator, createLocalizableByDimCursor, createLocalizableByDimCursor, createLocalizableCursor, createLocalizablePlaneCursor, createNewImage, createNewImage, createNewImage, createNewImage, createPositionArray, createType, createUniqueId, getActiveCursors, getCalibration, getCalibration, getContainer, getContainerFactory, getCursors, getCursors, getDimension, getDimensions, getDimensions, getDisplay, getImageFactory, getName, getNumActiveCursors, getNumCursors, getNumDimensions, getNumPixels, isEmpty, iterator, remove, removeAll, removeAllCursors, removeCursor, retainAll, setCalibration, setCalibration, setDefaultDisplay, setDisplay, setName, size, toArray, toArray, toString

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.Collection

equals, hashCode, parallelStream, removeIf, spliterator, stream

Methods inherited from interface java.lang.Iterable

forEach

Field Detail

BALL

public static final Morph.Shape BALL

CUBE

public static final Morph.Shape CUBE

BAR

public static final Morph.Shape BAR

Constructor Detail

Morph

public Morph(Object fn,
             Class<?> c,
             Morph.Shape s,
             int shapeLength,
             int lengthDim,
             float outside)
      throws Exception

Throws:

Exception