mpicbg.imglib.io

Class LOCI

java.lang.Object

mpicbg.imglib.io.LOCI

public class LOCI
extends Object

TODO

Author:

Stephan Preibisch, Stephan Saalfeld

Constructor Summary

Constructors

Constructor and Description
LOCI()

Method Summary

Modifier and Type	Method and Description
protected static void	applyMetaData(Image<?> img, IFormatReader reader)
protected static String	checkPath(String path)
static <T extends RealType<T>> Image<T>	open(String fileName)
static <T extends RealType<T>> Image<T>	openLOCI(String fileName, ContainerFactory containerFactory)
static <T extends RealType<T>> Image<T>	openLOCI(String path, String fileName, ContainerFactory containerFactory)
static <T extends RealType<T>> Image<T>	openLOCI(String path, String fileName, ContainerFactory containerFactory, int from, int to)
static Image<ByteType>	openLOCIByteType(String fileName, ContainerFactory factory)
static Image<ByteType>	openLOCIByteType(String fileName, ImageFactory<ByteType> factory)
static Image<ByteType>	openLOCIByteType(String path, String fileName, ContainerFactory factory)
static Image<ByteType>	openLOCIByteType(String path, String fileName, ImageFactory<ByteType> factory)
static Image<ByteType>	openLOCIByteType(String path, String fileName, ImageFactory<ByteType> factory, int from, int to)
static Image<FloatType>	openLOCIFloatType(String fileName, ContainerFactory factory)
static Image<FloatType>	openLOCIFloatType(String fileName, ImageFactory<FloatType> factory)
static Image<FloatType>	openLOCIFloatType(String path, String fileName, ContainerFactory factory)
static Image<FloatType>	openLOCIFloatType(String path, String fileName, ContainerFactory factory, int from, int to)
static Image<FloatType>	openLOCIFloatType(String path, String fileName, ImageFactory<FloatType> factory)
static Image<FloatType>	openLOCIFloatType(String path, String fileName, ImageFactory<FloatType> factory, int from, int to)
static Image<RGBALegacyType>	openLOCIRGBALegacyType(String path, String fileName, ImageFactory<RGBALegacyType> factory)
static Image<RGBALegacyType>	openLOCIRGBALegacyType(String path, String fileName, ImageFactory<RGBALegacyType> factory, int from, int to)
static Image<ShortType>	openLOCIShortType(String fileName, ContainerFactory factory)
static Image<ShortType>	openLOCIShortType(String fileName, ImageFactory<ShortType> factory)
static Image<ShortType>	openLOCIShortType(String path, String fileName, ContainerFactory factory)
static Image<ShortType>	openLOCIShortType(String path, String fileName, ContainerFactory factory, int from, int to)
static Image<ShortType>	openLOCIShortType(String path, String fileName, ImageFactory<ShortType> factory)
static Image<ShortType>	openLOCIShortType(String path, String fileName, ImageFactory<ShortType> factory, int from, int to)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String fileName, ContainerFactory factory)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String fileName, ImageFactory<Unsigned12BitType> factory)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String path, String fileName, ContainerFactory factory)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String path, String fileName, ContainerFactory factory, int from, int to)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String path, String fileName, ImageFactory<Unsigned12BitType> factory)
static Image<Unsigned12BitType>	openLOCIUnsigned12BitType(String path, String fileName, ImageFactory<Unsigned12BitType> factory, int from, int to)
static Image<UnsignedByteType>	openLOCIUnsignedByteType(String fileName, ContainerFactory factory)
static Image<UnsignedByteType>	openLOCIUnsignedByteType(String fileName, ImageFactory<UnsignedByteType> factory)
static Image<UnsignedByteType>	openLOCIUnsignedByteType(String path, String fileName, ContainerFactory factory)
static Image<UnsignedByteType>	openLOCIUnsignedByteType(String path, String fileName, ImageFactory<UnsignedByteType> factory)
static Image<UnsignedByteType>	openLOCIUnsignedByteType(String path, String fileName, ImageFactory<UnsignedByteType> factory, int from, int to)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LOCI

public LOCI()

Method Detail

open

public static <T extends RealType<T>> Image<T> open(String fileName)

openLOCI

public static <T extends RealType<T>> Image<T> openLOCI(String fileName,
                                                        ContainerFactory containerFactory)

openLOCI

public static <T extends RealType<T>> Image<T> openLOCI(String path,
                                                        String fileName,
                                                        ContainerFactory containerFactory)

openLOCI

public static <T extends RealType<T>> Image<T> openLOCI(String path,
                                                        String fileName,
                                                        ContainerFactory containerFactory,
                                                        int from,
                                                        int to)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String fileName,
                                                                 ContainerFactory factory)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String fileName,
                                                                 ImageFactory<Unsigned12BitType> factory)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String path,
                                                                 String fileName,
                                                                 ContainerFactory factory)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String path,
                                                                 String fileName,
                                                                 ImageFactory<Unsigned12BitType> factory)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String path,
                                                                 String fileName,
                                                                 ContainerFactory factory,
                                                                 int from,
                                                                 int to)

openLOCIUnsigned12BitType

public static Image<Unsigned12BitType> openLOCIUnsigned12BitType(String path,
                                                                 String fileName,
                                                                 ImageFactory<Unsigned12BitType> factory,
                                                                 int from,
                                                                 int to)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String fileName,
                                                 ContainerFactory factory)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String fileName,
                                                 ImageFactory<ShortType> factory)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String path,
                                                 String fileName,
                                                 ContainerFactory factory)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String path,
                                                 String fileName,
                                                 ImageFactory<ShortType> factory)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String path,
                                                 String fileName,
                                                 ContainerFactory factory,
                                                 int from,
                                                 int to)

openLOCIShortType

public static Image<ShortType> openLOCIShortType(String path,
                                                 String fileName,
                                                 ImageFactory<ShortType> factory,
                                                 int from,
                                                 int to)

applyMetaData

protected static void applyMetaData(Image<?> img,
                                    IFormatReader reader)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String fileName,
                                                 ContainerFactory factory)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String fileName,
                                                 ImageFactory<FloatType> factory)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String path,
                                                 String fileName,
                                                 ContainerFactory factory)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String path,
                                                 String fileName,
                                                 ImageFactory<FloatType> factory)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String path,
                                                 String fileName,
                                                 ContainerFactory factory,
                                                 int from,
                                                 int to)

openLOCIFloatType

public static Image<FloatType> openLOCIFloatType(String path,
                                                 String fileName,
                                                 ImageFactory<FloatType> factory,
                                                 int from,
                                                 int to)

openLOCIByteType

public static Image<ByteType> openLOCIByteType(String fileName,
                                               ContainerFactory factory)

openLOCIByteType

public static Image<ByteType> openLOCIByteType(String fileName,
                                               ImageFactory<ByteType> factory)

openLOCIByteType

public static Image<ByteType> openLOCIByteType(String path,
                                               String fileName,
                                               ContainerFactory factory)

openLOCIByteType

public static Image<ByteType> openLOCIByteType(String path,
                                               String fileName,
                                               ImageFactory<ByteType> factory)

openLOCIByteType

public static Image<ByteType> openLOCIByteType(String path,
                                               String fileName,
                                               ImageFactory<ByteType> factory,
                                               int from,
                                               int to)

openLOCIUnsignedByteType

public static Image<UnsignedByteType> openLOCIUnsignedByteType(String fileName,
                                                               ContainerFactory factory)

openLOCIUnsignedByteType

public static Image<UnsignedByteType> openLOCIUnsignedByteType(String fileName,
                                                               ImageFactory<UnsignedByteType> factory)

openLOCIUnsignedByteType

public static Image<UnsignedByteType> openLOCIUnsignedByteType(String path,
                                                               String fileName,
                                                               ContainerFactory factory)

openLOCIUnsignedByteType

public static Image<UnsignedByteType> openLOCIUnsignedByteType(String path,
                                                               String fileName,
                                                               ImageFactory<UnsignedByteType> factory)

openLOCIUnsignedByteType

public static Image<UnsignedByteType> openLOCIUnsignedByteType(String path,
                                                               String fileName,
                                                               ImageFactory<UnsignedByteType> factory,
                                                               int from,
                                                               int to)

openLOCIRGBALegacyType

public static Image<RGBALegacyType> openLOCIRGBALegacyType(String path,
                                                           String fileName,
                                                           ImageFactory<RGBALegacyType> factory)

openLOCIRGBALegacyType

public static Image<RGBALegacyType> openLOCIRGBALegacyType(String path,
                                                           String fileName,
                                                           ImageFactory<RGBALegacyType> factory,
                                                           int from,
                                                           int to)

checkPath

protected static String checkPath(String path)