Module org.bigdataviewer.core

Package bdv.img.imaris

Class ImarisImageLoader<T extends net.imglib2.type.NativeType<T>,V extends net.imglib2.Volatile<T> & net.imglib2.type.NativeType<V>,A extends net.imglib2.img.basictypeaccess.volatiles.VolatileAccess & net.imglib2.img.basictypeaccess.DataAccess>

java.lang.Object

bdv.img.imaris.ImarisImageLoader<T,V,A>

All Implemented Interfaces:

ViewerImgLoader, mpicbg.spim.data.generic.sequence.BasicImgLoader, mpicbg.spim.data.generic.sequence.BasicMultiResolutionImgLoader

public class ImarisImageLoader<T extends net.imglib2.type.NativeType<T>,V extends net.imglib2.Volatile<T> & net.imglib2.type.NativeType<V>,A extends net.imglib2.img.basictypeaccess.volatiles.VolatileAccess & net.imglib2.img.basictypeaccess.DataAccess>
extends Object
implements ViewerImgLoader

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
class	ImarisImageLoader.SetupImgLoader

Constructor Summary

Constructors

Constructor	Description
ImarisImageLoader(File hdf5File, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription)

Method Summary

Modifier and Type	Method	Description
CacheControl	getCacheControl()
File	getImsFile()
ImarisImageLoader.SetupImgLoader	getSetupImgLoader(int setupId)
protected <T extends net.imglib2.type.NativeType<T>> VolatileCachedCellImg<T,A>	prepareCachedImage(ViewLevelId id, net.imglib2.cache.volatiles.LoadingStrategy loadingStrategy, T type)	(Almost) create a CellImg backed by the cache.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface bdv.ViewerImgLoader

setCreatedSharedQueue, setNumFetcherThreads

Constructor Detail

ImarisImageLoader

public ImarisImageLoader(File hdf5File,
                         mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription)

Method Detail

prepareCachedImage

protected <T extends net.imglib2.type.NativeType<T>> VolatileCachedCellImg<T,A> prepareCachedImage(ViewLevelId id,
                                                                                                         net.imglib2.cache.volatiles.LoadingStrategy loadingStrategy,
                                                                                                         T type)

(Almost) create a CellImg backed by the cache. The created image needs a linked type before it can be used. The type should be either UnsignedShortType and VolatileUnsignedShortType.

getImsFile

public File getImsFile()

getCacheControl

public CacheControl getCacheControl()

Specified by:

getCacheControl in interface ViewerImgLoader

getSetupImgLoader

public ImarisImageLoader.SetupImgLoader getSetupImgLoader(int setupId)

Specified by:

getSetupImgLoader in interface mpicbg.spim.data.generic.sequence.BasicImgLoader

Specified by:

getSetupImgLoader in interface mpicbg.spim.data.generic.sequence.BasicMultiResolutionImgLoader

Specified by:

getSetupImgLoader in interface ViewerImgLoader