Package fiji.plugin.trackmate.tracking.jaqaman.costmatrix

Interface Summary

Interface	Description
CostMatrixCreator<K extends Comparable<K>,J extends Comparable<J>>	Interface for function that can generate a SparseCostMatrix from assignment candidates.

Class Summary

Class	Description
DefaultCostMatrixCreator<K extends Comparable<K>,J extends Comparable<J>>	A CostMatrixCreator that build a cost matrix from 3 lists containing the sources, the targets and the associated costs.
DefaultCostMatrixCreator.Assignment
GraphSegmentSplitter
JaqamanLinkingCostMatrixCreator<K extends Comparable<K>,J extends Comparable<J>>	A CostMatrixCreator that can generate a cost matrix from a list of sources, a list of targets and a CostFunction that can generate a cost for any combination.
JaqamanSegmentCostMatrixCreator	This class generates the top-left quadrant of the LAP segment linking cost matrix, following Jaqaman et al., 2008 Nature Methods.
LAPJV	Implements the Jonker-Volgenant algorithm for linear assignment problems, tailored for sparse cost matrices.
ResizableDoubleArray
SparseCostMatrix	A class to represent a sparse cost matrix.