fiji.plugin.trackmate.action.fit

Class SpotGaussianFitter3DFixedRadius

java.lang.Object

fiji.plugin.trackmate.action.fit.AbstractSpotFitter

fiji.plugin.trackmate.action.fit.SpotGaussianFitter3DFixedRadius

All Implemented Interfaces:

SpotFitter, Benchmark, MultiThreaded

public class SpotGaussianFitter3DFixedRadius
extends AbstractSpotFitter

3D case! Fixed radius

Nested Class Summary

Nested classes/interfaces inherited from class fiji.plugin.trackmate.action.fit.AbstractSpotFitter

AbstractSpotFitter.Observation

Field Summary

Fields inherited from class fiji.plugin.trackmate.action.fit.AbstractSpotFitter

calibration, channel, img, optimizer

Constructor Summary

Constructors

Constructor and Description
SpotGaussianFitter3DFixedRadius(ij.ImagePlus imp, int channel)

Method Summary

Modifier and Type	Method and Description
void	fit(Spot spot)
void	process(Iterable<Spot> spots, Logger logger)

Methods inherited from class fiji.plugin.trackmate.action.fit.AbstractSpotFitter

clipBackground, gatherObservationData, getNumThreads, getProcessingTime, getSlice, setNumThreads, setNumThreads

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SpotGaussianFitter3DFixedRadius

public SpotGaussianFitter3DFixedRadius(ij.ImagePlus imp,
                                       int channel)

Method Detail

process

public void process(Iterable<Spot> spots,
                    Logger logger)

Specified by:

process in interface SpotFitter

Overrides:

process in class AbstractSpotFitter

fit

public void fit(Spot spot)

Specified by:

fit in interface SpotFitter

Specified by:

fit in class AbstractSpotFitter