Module sc.fiji.filamentdetector

Package sc.fiji.filamentdetector.detection

Class AbstractFilamentDetector

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

sc.fiji.filamentdetector.detection.AbstractFilamentDetector

All Implemented Interfaces:

Comparable<org.scijava.Prioritized>, org.scijava.Contextual, org.scijava.Identifiable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.Named, org.scijava.plugin.HasPluginInfo, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.Prioritized, org.scijava.Versioned, FilamentDetector

Direct Known Subclasses:

IJ2RidgeDetectionFilamentDetector, RidgeDetectionFilamentDetector

public abstract class AbstractFilamentDetector
extends org.scijava.plugin.AbstractRichPlugin
implements FilamentDetector

Constructor Summary

Constructors

Constructor	Description
AbstractFilamentDetector()

Method Summary

Modifier and Type	Method	Description
net.imagej.Dataset	getDataset()
Filaments	getFilaments()
net.imagej.display.ImageDisplay	getImageDisplay()
String	getName()
double	getSimplifyToleranceDistance()
boolean	isDetectOnlyCurrentFrame()
boolean	isSimplifyFilaments()
void	setDataset(net.imagej.Dataset dataset)
void	setDetectOnlyCurrentFrame(boolean detectOnlyCurrentFrame)
void	setFilaments(Filaments filaments)
void	setImageDisplay(net.imagej.display.ImageDisplay imageDisplay)
void	setName(String name)
void	setSimplifyFilaments(boolean simplifyFilaments)
void	setSimplifyToleranceDistance(double simplifyToleranceDistance)
void	simplifyFilaments()

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority, toString

Methods inherited from class org.scijava.AbstractContextual

context, getContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface sc.fiji.filamentdetector.detection.FilamentDetector

detect, detect, detectCurrentFrame, detectCurrentFrame, detectFrame, detectFrame, toString

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier, log

Methods inherited from interface org.scijava.Versioned

getVersion

Constructor Detail

AbstractFilamentDetector

public AbstractFilamentDetector()

Method Detail

simplifyFilaments

public void simplifyFilaments()

Specified by:

simplifyFilaments in interface FilamentDetector

setDetectOnlyCurrentFrame

public void setDetectOnlyCurrentFrame(boolean detectOnlyCurrentFrame)

Specified by:

setDetectOnlyCurrentFrame in interface FilamentDetector

isSimplifyFilaments

public boolean isSimplifyFilaments()

Specified by:

isSimplifyFilaments in interface FilamentDetector

setSimplifyFilaments

public void setSimplifyFilaments(boolean simplifyFilaments)

Specified by:

setSimplifyFilaments in interface FilamentDetector

getSimplifyToleranceDistance

public double getSimplifyToleranceDistance()

Specified by:

getSimplifyToleranceDistance in interface FilamentDetector

setSimplifyToleranceDistance

public void setSimplifyToleranceDistance(double simplifyToleranceDistance)

Specified by:

setSimplifyToleranceDistance in interface FilamentDetector

getName

public String getName()

Specified by:

getName in interface org.scijava.Named

setName

public void setName(String name)

Specified by:

setName in interface org.scijava.Named

setDataset

public void setDataset(net.imagej.Dataset dataset)

Specified by:

setDataset in interface FilamentDetector

setFilaments

public void setFilaments(Filaments filaments)

Specified by:

setFilaments in interface FilamentDetector

getFilaments

public Filaments getFilaments()

Specified by:

getFilaments in interface FilamentDetector

getImageDisplay

public net.imagej.display.ImageDisplay getImageDisplay()

Specified by:

getImageDisplay in interface FilamentDetector

setImageDisplay

public void setImageDisplay(net.imagej.display.ImageDisplay imageDisplay)

Specified by:

setImageDisplay in interface FilamentDetector

getDataset

public net.imagej.Dataset getDataset()

Specified by:

getDataset in interface FilamentDetector

isDetectOnlyCurrentFrame

public boolean isDetectOnlyCurrentFrame()

Specified by:

isDetectOnlyCurrentFrame in interface FilamentDetector