Module sc.fiji.filamentdetector

Package sc.fiji.filamentdetector.detection

Class IJ2RidgeDetectionFilamentDetector

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

sc.fiji.filamentdetector.detection.AbstractFilamentDetector

sc.fiji.filamentdetector.detection.IJ2RidgeDetectionFilamentDetector

All Implemented Interfaces:

Comparable<org.scijava.Prioritized>, org.scijava.Contextual, org.scijava.Identifiable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.Named, org.scijava.plugin.HasPluginInfo, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.Prioritized, org.scijava.Versioned, FilamentDetector

public class IJ2RidgeDetectionFilamentDetector
extends AbstractFilamentDetector

Constructor Summary

Constructors

Constructor	Description
IJ2RidgeDetectionFilamentDetector()

Method Summary

Modifier and Type	Method	Description
void	detect()
void	detect(int channelIndex)
void	detectCurrentFrame()
void	detectCurrentFrame(int channelIndex)
void	detectFrame(int frame)
void	detectFrame(int frame, int channel)
double	getLineWidth()
double	getLowerThreshold()
double	getUpperThreshold()
boolean	isDetectJunctions()
void	setDetectJunctions(boolean detectJunctions)
void	setLineWidth(double lineWidth)
void	setLowerThreshold(double lowerThresh)
void	setUpperThreshold(double upperThresh)
String	toString()

Methods inherited from class sc.fiji.filamentdetector.detection.AbstractFilamentDetector

getDataset, getFilaments, getImageDisplay, getName, getSimplifyToleranceDistance, isDetectOnlyCurrentFrame, isSimplifyFilaments, setDataset, setDetectOnlyCurrentFrame, setFilaments, setImageDisplay, setName, setSimplifyFilaments, setSimplifyToleranceDistance, simplifyFilaments

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority

Methods inherited from class org.scijava.AbstractContextual

context, getContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier, log

Methods inherited from interface org.scijava.Versioned

getVersion

Constructor Detail

IJ2RidgeDetectionFilamentDetector

public IJ2RidgeDetectionFilamentDetector()

Method Detail

detect

public void detect()

detect

public void detect(int channelIndex)

detectCurrentFrame

public void detectCurrentFrame()

detectCurrentFrame

public void detectCurrentFrame(int channelIndex)

detectFrame

public void detectFrame(int frame)

detectFrame

public void detectFrame(int frame,
                        int channel)

getUpperThreshold

public double getUpperThreshold()

setUpperThreshold

public void setUpperThreshold(double upperThresh)

getLowerThreshold

public double getLowerThreshold()

setLowerThreshold

public void setLowerThreshold(double lowerThresh)

getLineWidth

public double getLineWidth()

setLineWidth

public void setLineWidth(double lineWidth)

isDetectJunctions

public boolean isDetectJunctions()

setDetectJunctions

public void setDetectJunctions(boolean detectJunctions)

toString

public String toString()

Specified by:

toString in interface FilamentDetector

Overrides:

toString in class org.scijava.plugin.AbstractRichPlugin